FFAS03 results for PF17319

Query: PF17319.2; D1ARU2_SEBTE/23-116; Family of unknown function (DUF5362 topsan), from PfamA32U

Results of FFAS03 search in COG1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.

						`. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90`
#	Score	Template	Links and tools	%id	First	`LKFIGLVQQIMGVLTIISGAIMCLTIIGAAAGVPYIIGALNIFKSGGAFGDTSRNESGESLREAIAGLAKGMKLMLIGFVIWIVLYILLMVVIM`	Last
1	-8.000	`[K] COG3343 DNA-directed RNA polymerase, delta subunit`	`ali follow..`	15	1	`MKLDVFAGQEKSELSMIEVARAILEERGRDNEMYF----SDLVNEIQNYLGKSDAGIRHALPFFYTDLNTDGSFIPLGENKW............`	78
2	-5.980	`[S] KOG4556 Predicted membrane protein`	`ali follow..`	22	6	`.....LLSLLLATWTLLSIARLVFDLIGNL--VVVVFDFVQIVLL-GLFGATQKRRP-----------------LLYTLLSSNALSVTINVLIF`	77
3	-5.790	`[R] KOG4520 Predicted coiled-coil protein`	`ali follow..`	29	11	`.....................................GGQDQFNWEDVKTDKQRNYLGNSLMAPVGRWQKGRDL....................`	48
4	-5.760	`[U] COG0811 Biopolymer transport proteins`	`ali follow..`	11	124	`......LENRVPFLATVASVSPYIGLFGT------VWGIMHAFMALSGAKQATLQMVAPGIAEALIATAIGLFAAIPAVMAY............`	193
5	-5.600	`[O] KOG2292 Oligosaccharyltransferase, STT3 subunit`	`ali follow..`	22	119	`.....FLAPIFSGLTSISTYLLTKELWSAGAGLASFIAIVPGYISRSVAGSYDNEKTGSVFWSAAAALSYFYMVSAWGGYVFIINLIPLHVFVL`	227
6	-5.370	`[S] COG5613 Uncharacterized conserved protein`	`ali follow..`	25	158	`.KKSGIASKIFGIASVIVGAIMVASGVGAVAGAMMVIGMANMAVKQAAEDGLISQEAMKILGPILTAIEVALTVV...................`	239
7	-5.320	`[C] KOG3025 Mitochondrial F1F0-ATP synthase, subunit c/ATP9/proteolipid`	`ali follow..`	18	67	`.......RDIDTAAKFIGAGAATVGVAGSGAGIGTVFGS--------LIIGYARNPSQQLFSYAILGFALSEAMGLFCLMVAFLILFAM.....`	142
8	-5.320	`[P] KOG2399 K+-dependent Na+:Ca2+ antiporter`	`ali follow..`	12	392	`..ILTFFSSMVTLWLAVTELEVLSEIVGIVFNLSESFMAVTFEAVSNATPDIIAN---------YQLALQGYGRMAFAAIIGGPVFAILVSM..`	472
9	-5.290	`[K] KOG2181 LIM domain binding protein LDB1/NLI/CLIM`	`ali follow..`	31	1	`.....................MCVVIF-----LKFL------------FSDNGNNQHGT---EAAFGLAQSYRIQDLLFII-VIFF........`	45
10	-5.240	`[R] KOG4812 Golgi-associated protein/Nedd4 WW domain-binding protein`	`ali follow..`	11	144	`..FMAFIFNWLGFCLSFCITNTIAGRYGAICGF-----GLSLIKWILIVRFSDYFTGYFNGQYWLWWI-----FLVLGLLLFF...........`	214

FFAS is supported by the NIH grant R01-GM087218-01

jobs submitted since Jan 1, 2011

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