Scheduled maintenance will begin on May 30th, 2025. Server will be temporarily unavailable — learn more.
current user: public
If you have questions about the server, please let us know.

Query: PF02659.15; MNTP_SHIDS/30-182; Putative manganese efflux pump, from PfamA32U

Results of FFAS03 search in CSGID
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .  130    .  140    .  150
# Score Template Links and tools%idFirst KPKFSEALRTGLIFGAVETLTPLIGWGMGMLASRFVLEWNHWIAFVLLIFLGGRMIIEGFRGADDEDEEPRRRHGFWLLVTTAIATSLDAMAVGVGLAFLQVNIIATALAIGCATLIMSTLGMMVGRFIGSIIGKKAEILGGLVLIGIGVQILLast
1 -7.640IDP92689 hypothetical protein SAVC_09040 [Staphylococcus aureus subsp. aureus VC40] YP_005291395 [Staphylococcus aureus subsp. aureus VC40]  ali follow..  6  296..AYLNGLQQQSNYFRFQYFNPL-------KSERYYRNLDEQVLALITGEIGSMPDLKKPEDKPDSKQRSFEPHEKDDFTVVKKQEDNKK-------SASTAYSKSWLAIVCSMMVVFSIMLFLFVKRNKKKNKNESQ............... 417
2 -6.680IDP90775 gene: dipZ; thiol:disulfide interchange protein precursor [Yersinia pestis CO92] YPO0345 [Yersinia pestis CO92]  ali follow..  11  236.LAVVYVQGMALTYTLLGLVVAAAGLQFQAALQHVLIGLSVLFVLLALSMFGLYSLQSSLQTRLTQWSNSQRGGSLAGVFAMGALAGLICLSAILLYIAQSGNMLAGGGTLYLYALGMGIPLVVVTLFGNKLIPRYVKEAFGFVILALPVFLL 404
3 -6.560IDP06254 cation efflux family protein [Streptococcus pneumoniae TIGR4] NP_345999 [Streptococcus pneumoniae TIGR4]  ali follow..  11  46.........FNNVSDIIGNVALLIGIRMARQPAD-IEDLASLITSIIMFYVGFDVLRDTIQKILSREETVIDPLGATLGIISAAIMFV-NTRLSKKSNSNALKAAAKDNLSDAVTSLGTAIAILASSFNYPIVDKLVAIIITFFILKTAYDIF 200
4 -6.550IDP92691 hypothetical protein SAUSA300_0346 [Staphylococcus aureus subsp. aureus USA300_FPR3757] YP_493060 [Staphylococcus aureus subsp. aureus USA300_FPR3757]  ali follow..  15  317.IFLREGLEVLLIVMTLTTMT--GGAIAGLVLSESMEAGLGIVAVILMFIVGVWMHKRSNAKRKNMYANAISNGNLVLLATIGISVLREGVEVIIFYMGMIGELATKDFIIGIA------LAIVILIIFALLFRFIVKRVLSIFIFIMGFKML 505
5 -6.360IDP04211 gene: secF; preprotein translocase subunit SecF [Salmonella typhimurium LT2] STM0408_1_323 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]  ali follow..  15  163.FRFEWRLAAGVVIALAHDVIITLGILSLFHI-----EIDLTIVASLMSVIGYSLIRENFRKIRRGTPYEIFNVSLTQTLHRTLITSGTTLVVILMLYLFGGPVLSLTMLIGVSIGTASSI................................ 289
6 -6.320IDP06236 PTS system mannitol-specific transporter subunit IIBC [Streptococcus pneumoniae TIGR4] NP_344918 [Streptococcus pneumoniae TIGR4]  ali follow..  13  26.......IGAFIAWGVLTALFIADGYLPNEQLATVVGPMLTYLLPILIGYTGGYMIHG------QRGAVVGAIATVGAITGSSVPMFIGAMVMGPLGGWTGFEMLVNNFSAGLVGFALLLLAFYA---IGPVVSTLTGAVGNGVEAIVNARLL 176
7 -6.190IDP91323 hypothetical protein VV2_0301 [Vibrio vulnificus CMCP6] VV2_0301 [Vibrio vulnificus CMCP6]  ali follow..  10  90...............LTGAIAPVLGAEPPPWLAEYGPELTLLATVSIIGFGKYAMMQEIQKEEALKRAAIIQAAK.............................................................................. 152
8 -5.880IDP91819 gene: yjhQ; KpLE2 phage-like element; predicted acetyltransferase [Escherichia coli str. K-12 substr. MG1655] b4307 [Escherichia coli str. K-12 substr. MG1655]  ali follow..  13  21.....................................................EVETRAFGFSKEADLVASLLEDESARPALSLLARYEGKAVGTRATFKGEMDSPLMHILAPLAVIPEYQGMGVGGRLIRTGIEHLRLMGCQTVFVLG.... 120
9 -5.830IDP04697 gene: yopB; secreted effector protein [Yersinia pestis CO92] YPCD1.29c [Yersinia pestis CO92]  ali follow..  16  155....KQVKKSGIASKIFGWLSAIASVIVGAIM----------VASGVGAVAGAMMVASAVKQAAEDGLISQEAMKILGPILTAIEVALTVVSTVMTFG-------------GSALKCLANIGAKLGANTASLVAKGAEFSAKVAQISTGI... 285
10 -5.620IDP91939 cation diffusion facilitator transporter - heavy metal transport [Streptococcus pneumoniae str. Canada MDR_19A] SpneCM_010100003755 [Streptococcus pneumoniae str. Canada MDR_19A]  ali follow..  10  30........SSAVLADSVHDLGDAIAIGISAFLETIFSLLGALVTAVILVTGSVLVILENVTKILHPQPVND------EGILWLGIIAITINLLASLVVGKGKTKNESILSLHFLEDTLGWVAVILMAIVLRFTD---YILDPLLSLVISFFIL 181
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 0 6 0   jobs submitted since Jan 1, 2011
Comments and questions to: webmaster
Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Schwarzenbacher R, Godzik A, Jaroszewski L. The JCSG MR pipeline: optimized alignments, multiple models and parallel searches. Acta Crystallogr D Biol Crystallogr. 2008 Jan;64(Pt 1):133-40. Epub 2007 Dec 5.