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Query: PF08045.11; E9DYC2_METAQ/1-287; Cell division control protein 14, SIN component, from PfamA32U

Results of FFAS03 search in CSGID
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MEALLSLAFDNLSSYDGPKVRKGLRQVEGLLAQICLSDGRAAAQRRQSCVDGEADAPLSPPRKDLGELSQDPAFREFFKLQEGFEWNVAMRLIRTLDRLMAKGSDGQNDLLILSALDLIQGVLLLHPPSKTLFSREQNMNLLLDLLEPFNCPAIQSATLLTLVVALIDTPSNTRTFEGLDGLLTVTSLFKSRSTSREVKLKLVEFLYCYLMPETPSIPRADQRDSVPAMLQRSPSKLAGAFNAESRRKRAGSSGLVTLTTEEKQELLSRHLSSVEDLVKDLKNCAPFLast
1 -10.700IDP91695 gene: KPNA1; importin subunit alpha-1 [Homo sapiens] NP_002255 [Homo sapiens]  ali follow..  10  170...AVPIFIELLSSEFEDVQEQAVWALGNIAGD-------STMCRDYVLDCNILPPLLQLFSKQNRLTMTRNAVWALSNLCRGKSPPPEFAKVSPCLNVLSWLLFVSDTDVLADACWALSYLSDGPNDKIQAVIDAGVCRRLVELLM-HNDYKVVSPALRAVGNIVTGDDIQTQVILNCSALQSLLHLLSSPK--ESIKKEACWTISNITAGNRAQIQTVIDANIFPALISILQTAEFRTRKEAAWAITNATSGGSAEQIKMDSKIVQVALNGLENILRLGEQEA.. 458
2 -6.820IDP95477 ELMO1 [Homo sapiens] AAL14466 [Homo sapiens]  ali follow..  13  82.AQNAQQLHERIQSSSMDAKLEALKDLASLFAQEFINLDGISLLTQMVESGTERYQKLQKIMKPCFGDMLSFTLTAFVELMDHGIVSWDTFSVAFIKKIASFVNKSAIDISILQSLAILESMVLNSHDLYQKVAQEITIGQLIPHLQ-GSDQEIQTYTIAVINALFLKAPDERRQ................................................................................................................ 260
3 -6.400IDP06019 phospholipase A2 activating protein, putative [Toxoplasma gondii ME49] EEB01121 [Toxoplasma gondii ME49]  ali follow..  11  634....AGKKIMEFDAQFPEDSPAHLTALEKQYLLDALEKIQSPSFMKKEFRACELDVIFEKLAV--PSSKAVPVMDVWRALAKSGDHGWMTVVVALRHLKEACASQADETPLILCCLRFLANL-MDLTTNRTVMLRH--ANVVLESLASDRVLTNPNKNVRTAASLLANFAVAFATKEETEGRIKVLKLLRGREGDADVFYRCLLAVLTILATPPQPQQRR-------------------LLRGACQEIDMADVLPPLNQNIPAEGRIGDAAQDILLLLE........ 899
4 -5.670IDP90382 hypothetical protein [Chlamydia trachomatis D/UW-3/CX] CT_350 [Chlamydia trachomatis D/UW-3/CX]  ali follow..  11  93.SEALELLSEAIETQDLYEQLLILNAATSQ-------LSKTSDKLLFKGLTASHPVIRLEAAYRLACMKNSKVSDYLYSFIYKLPEEIQNLAATIFLQLIHHLLSSPNNLTRNYVAYLIGEY-----------KQKRFLPTLRSLLT-SASPLDQEGALYAL------------KLEDSGSYPRIKALSSRSN--PEVVLAAAQTLLFLEKEEEALPILTNLCQQKLLRALYTARFLSQEKGEELLLPIFYNATQEEIRLNTALALVHQGCTDLHYLTEILES.... 353
5 -5.570IDP90389 hypothetical protein [Chlamydia trachomatis D/UW-3/CX] CT_384 [Chlamydia trachomatis D/UW-3/CX]  ali follow..  10  110.............................................................................................RLVPIVLQALSDDSDTVRE-IAVQVAVMY-----------GSSCLLRAVGDLAKNDSSIQVRITAYRAA------------VLEIQDLVPHLRVVVQNTQLDGTERREAWRSL................................................................................. 199
6 -5.470IDP00631 gene: scpB; segregation and condensation protein B SACOL1537 [Staphylococcus aureus subsp. aureus COL]  ali follow..  11  57..................................................................................................................................VLTTKKEAATYIEQLIEQKSQMKLSQAAMEVLSIIAYNQPLSRSDIELIRSINSAVKTLIAKGLVEAKVVNTDLFLNVFGISNIEDLPT.................................................................... 156
7 -5.300IDP91283 single-stranded DNA-binding protein [Bacillus anthracis str. Sterne] NT05BA5557 [Bacillus anthracis str. Sterne]  ali follow..  11  5.....................................................................................................................ILVGRLTKDPDLRYTPNGVAVATFTLAVNRAFANQQGEREADFINCVIWRKQAENVANYLKKGSLAGVDGRLQTRNYEGQDGKR--VYVTEVLAESVQFLEPRNGGGEQRGSFNQQPSGAGFGNQSSNPFGQSSNSGNQGNQGNSGFTKNDDPFSNVGQPIDISDDDLPF 172
8 -5.040IDP91926 gene: scpB; segregation and condensation protein B [Streptococcus pneumoniae str. Canada MDR_19A] SpneCM_010100003840 [Streptococcus pneumoniae str. Canada MDR_19A]  ali follow..  15  64..................................................................................................................................RLVTKPQFAEILKEYSKAPINQSLSRAALETLSIIAYKQPITRIEIDAIRGVNSALAKLQAFDLIKEDGKKTDYFLDYMGINHLEELPV.................................................................... 165
9 -5.030IDP04261 gene: scpB; segregation and condensation protein B [Clostridium perfringens ATCC 13124] CPF_2059 [Clostridium perfringens ATCC 13124]  ali follow..  15  78..................................................................................................................................QLVTKTKNSEYVQKLLKKNVRQSLSQASLESLAIICYKQPITRVEIDEIRGVKSAIQRLVEKNLVEETGRLTDEFLRHFALNDLGDLPS.................................................................... 179
10 -4.980IDP91343 methyl-accepting chemotaxis protein [Vibrio vulnificus CMCP6] VV2_0072 [Vibrio vulnificus CMCP6]  ali follow..  10  210....LMELVYNKKVDDISEIKLALKMRQSELNAVVGRIQDSNQQLIDSARNSSSNSDKASHNLKGQTHETEQVAAAITEMHSTANEIAQNAQSASDATDQAHSAASEGMITVQDTVKAIKLLAGQLDETSDVVSQGKTIGDVLIIIQGVAEQT-----LLALNAAI----EAARAGEQGRGFAVVADEVRKLAQRSHESTEEIQKVIGLIQSSTQKAVSSMSEGTHLAEQCVSSADSSGQKLQILLDQVTDISDRNNQAVEEMARVTEDMSSSVQSISDACSATN.. 489

FFAS is supported by the NIH grant R01-GM087218-01
1 4 7 6 0 7   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Pio F, Pawlowski K, Godzik A. Saturated BLAST: an automated multiple intermediate sequence search used to detect distant homology. Bioinformatics. 2000 Dec;16(12):1105-10.