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Query: PF11300.8; L0F544_DESDL/8-135; Protein of unknown function (DUF3102 topsan), from PfamA32U

Results of FFAS03 search in CSGID
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst RTPQVIATEINMIVHQTKKILLTNAIEIGRRLKEAKSLVEHGEWGKWLEESVSYSQSTACRLIRICEEYGASLPDGSGTSNLAPVPNLTYTQALLLLGLPEGEREEFIAKNDVATMTKQELQQALRDRLast
1 -30.500IDP90397 gene: gp6D; CHLTR Plasmid Paralog [Chlamydia trachomatis D/UW-3/CX] CT_583 [Chlamydia trachomatis D/UW-3/CX]  ali follow..  14  65.ISHNDLQQLCHLSAQVKQIHHQAILLHGERIKKVRELLKEGVFSAWLLL-TYGNRQTPYNFLVYYELFSALPDT---LKLELERLPRQAVYTLASREGSQEKKEEIIRNQGETRGELLEIIRREFP. 190
2 -5.950IDP04695 gene: YPCD1.01; putative transposase [Yersinia pestis CO92] YPCD1.01 [Yersinia pestis CO92]  ali follow..  17  5.............................ETVMEIKILHKQGMSSRAIARELGISRNTVKRYLQAKSEPPKYTPRPAVASLLDEY---------------RDYIRQRIADAHPYKIPATVIAREIRDQ 88
3 -5.830IDP92054 proteasome subunit alpha type 7, putative [Toxoplasma gondii ME49] TGME49_058150 [Toxoplasma gondii ME49]  ali follow..  8  103.SVDYISKFIAQVQQKYTHRGGVRPFGLSCLIAGAEHD-PSGICAKWKGAAMGKNYRTVQEYLE---------KNYAPDLDEDGAVHLAVGALMEVVEAGHRHIEAVVKKEQFYFLDEDRLEKEAQR. 228
4 -5.590IDP06229 phosphocarrier protein HPr [Streptococcus pneumoniae TIGR4] NP_345646 [Streptococcus pneumoniae TIGR4]  ali follow..  7  8...............................................VVAETGIHARPATLLVQTASKFASDITLEYKGKSVNLKSIMGVMSL----GVGQGADVTISAEGADADDAIAAISETMEKE 84
5 -5.030IDP92044 proteasome subunit alpha type 6, putative [Toxoplasma gondii ME49] TGME49_042290 [Toxoplasma gondii ME49]  ali follow..  6  117.PVYALAKRIADINQVYTQFAYMRLHACTGIMISYDEE-PAGFFAGYKACASGTKEQEATNILE--KMVKKRSRTTPKEVIECAISAMQHVLAMDFKASDIEVGVVTKDQPAFRILSEHEVEDHLTS. 248
6 -4.980IDP01227 gene: ptsH-1; phosphocarrier protein HPr BA_4268 [Bacillus anthracis str. Ames]  ali follow..  10  7...............................................VTSDSGIHARPATLLVNTASKFGSDINLEYNGKNVNLKSIMGVMSL----GIQQNAEIKITANGDDAAQALAAIEETMKNE 83
7 -4.890IDP95164 putative regulatory protein [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] YP_002918285 [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044]  ali follow..  12  135QRAQAVLPLVELAIRDCLQEEDDLPAILTAKEREIVGMVREGASNKLIARQLDISLSTVKTHLNIFAKTEVVNRT..................................................... 210
8 -4.700IDP00885 gene: fruF; fructose-specific PTS IIA/HPr components STM2206 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]  ali follow..  12  292...............................................VRNEHGLHARPGTMLVNTIKQFNSEITVTNLDGTGKPANGRSLMKVVAL-GVKKGHRLRFTAQGEDAEQALKAIGDAIAA. 370
9 -4.660IDP02552 gene: ptsH; phosphocarrier protein HPr [Coxiella burnetii RSA 493] CBU_0743 [Coxiella burnetii RSA 493]  ali follow..  7  8...............................................IINKLGLHARAAIKLTNLASRYQSETWVRFNDRKVNAKSLMCLMVL----AANQGAEIELTVSGEDEKEAMEAIEKLINDK 84
10 -4.640IDP01024 gene: flgM; anti-sigma28 factor FlgM STM1172 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]  ali follow..  27  61.............................ERVEALKTAIRNGELK---------TGKIADSLIREAQSY........................................................... 93
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 0 4 6   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Godzik A. cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences. Bioinformatics. 2006 May 26;