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current user: public |
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Query: PF15099.6; H9H1Z7_MELGA/1-128; Phosphoinositide-interacting protein family, from PfamA32U |
. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . | |||||||
# | Score | Template | Links and tools | %id | First | PPSPNGSLKSPPSKELLTSNTASTLCISSRSESVWTNTSRSKWDIYHKPIIVMSVGAAVFLFGTVITTLSCFEIKNNEVYKMCGPAFLSMGLMLLVCGLVWIPIIRKKQKQRQKSQFLQSLRSFFFNR | Last |
1 | -6.640 | IDP06415 gene: ORF67; ORF67 [Human herpesvirus 8] YP_001129424 [Human herpesvirus 8] | ali follow.. | 21 | 232 | ................................................................ILGAFQWSLGRAVALVRRSWP-WISAGIAFLCLGLVWM.......................... | 268 |
2 | -6.200 | IDP90189 gene: CPXV175 CDS; CPXV175 protein AAM13616.1 [Cowpox virus (Brighton Red)] | ali follow.. | 17 | 179 | .....SMFTLRHIIGLLMMTLPSIFLIITKVFSFWLLCKLSCAVHL---IYYQLAGYILTVLGLGLSLKECVD----------GTLLLSLGTIMVHFSLLFLVCFPSTQRD................. | 275 |
3 | -6.070 | IDP05012 cell wall surface anchor family protein [Bacillus anthracis str. Ames] BA_5070 [Bacillus anthracis str. Ames] | ali follow.. | 20 | 124 | ......................................................................................MMALSACLVGIGTLFGLKRRNKVKA................. | 148 |
4 | -5.480 | IDP06124 hypothetical protein jhp0592 [Helicobacter pylori J99] NP_223310 [Helicobacter pylori J99] | ali follow.. | 34 | 7 | ......................................................................................YAYMYLILFVCGLAW-PPLKQNIPNKSLS............. | 45 |
5 | -5.450 | IDP02050 gene: yjeT; putative inner membrane protein [Salmonella typhimurium LT2] STM4365 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] | ali follow.. | 17 | 1 | ...................................................MNSTIWLALALVLVLEGLGPMLYPGSALAQLPENVLRRFGGGLVVAGVVVYYMLRK..................... | 62 |
6 | -5.240 | IDP06539 gene: fms13; LPXTG family cell surface protein Fms13 [Enterococcus faecium DO] AFK58158 [Enterococcus faecium DO] | ali follow.. | 18 | 479 | ......ETMAPEGYVLPTGEAAFTEFIISYGSYNEEIQIVGVENPGPERVPLPATGGN----GLLA--------------------FLLIGISLMIGAYSWY--RKSKMKSE................ | 564 |
7 | -5.230 | IDP90133 CD47-like putative membrane protein [Monkeypox virus] MPXV_ZAI1979_005_159 [Monkeypox virus] | ali follow.. | 18 | 179 | .....SMFTLRHIIGLLMMTLPSIFLIITKVFSFWLLCKLSCAVHL---IYYQLAGYILTVLGLGLSLKECVD----------GTLLLSLGTIMVHFGLLFLVCFPSTQRD................. | 275 |
8 | -5.220 | IDP06486 gene: A21L; A21L [Monkeypox virus Zaire-96-I-16] NP_536558 [Monkeypox virus Zaire-96-I-16] | ali follow.. | 21 | 5 | ......................................................................................FLILCYFILIFNII-VPAISEKMRRERAA............. | 32 |
9 | -5.160 | IDP95185 gene: lmo0183; lmo0183 [Listeria monocytogenes EGD-e] CAC98398 [Listeria monocytogenes EGD-e] | ali follow.. | 20 | 463 | ....................TRAGYAGVQRYSAVWTGDNRSHWEHLEMSLPMIMNLG---LSGVAFTGADVGGFSSDCTKEML--RWTQAG--------AFLPYFRNHCVQDSIYQ............ | 546 |
10 | -4.940 | IDP02135 putative aspartate racemase [Salmonella typhimurium LT2] STM4510 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] | ali follow.. | 12 | 104 | ................ILDATLGDIPPSARHVGLLATNATLATGLYQKTLIQPEDAGQALVMQAIYTLKRGDKTAAQALLLPQIDSLIARGAQAIIMGCTEIPLIVAGHERAIACPMIDSTA...... | 216 |
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Li W, Pio F, Pawlowski K, Godzik A. Saturated BLAST: an automated multiple intermediate sequence search used to detect distant homology. Bioinformatics. 2000 Dec;16(12):1105-10. |