Scheduled maintenance will begin on May 30th, 2025. Server will be temporarily unavailable — learn more.
current user: public
If you have questions about the server, please let us know.

Query: PF15432.6; F2I912_AERUA/17-140; Accessory Sec secretory system ASP3, from PfamA32U

Results of FFAS03 search in CSGID
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120
# Score Template Links and tools%idFirst YAYGSQIVLENPDHIHFKNTLMPSGERITSWSSRSVFQTTKDSAKLPLLTRGESYQLIFQGKTVPEGSIFFKISFFDYYGGPIEEYYLRTPSDYFTVPDTYNYYEIALHHGGCLSLDFNQIILVLast
1 -8.240IDP91533 gene: omcB; OmcB [Chlamydia muridarum Nigg] TC_0727 [Chlamydia muridarum str. Nigg]  ali follow..  12  337...CKPVEY----VISVSNPTLSPGITVVE-AAGAQISCNKLVWTLKELNPGESLQYKVLVRAQTPGQFTNNVVVKSCSDCVAATHMCVVDTCDPICVGENTVYRICVTNRGSAEDT--NVSLI 477
2 -7.800IDP05371 conserved repeat domain protein [Bacillus anthracis str. Ames] BA_3601 [Bacillus anthracis str. Ames]  ali follow..  10 1813...GDTLTY----SVQVTNDVPSPSLEFVPGSVQINGIPQVGLNSLPDLAVGDSVLITFAVNVIAMNTARVTGDFELIPGERGSLDMQKEVDNSIVGVGETVTYTVRILNTGTADAM--NVQFI 1968
3 -7.740IDP90415 gene: omcB; 60kDa Cysteine-Rich OMP [Chlamydia trachomatis D/UW-3/CX] CT_443 [Chlamydia trachomatis D/UW-3/CX]  ali follow..  11  336...CKPVEY----VISVSNDTLSPGVTVLE-AAGAQISCNKVVWTVKELNPGESLQYKVLVRAQTPGQFTNNVVVKSCSDCVAATHMCVVDTCDPVCVGENTVYRICVTNRGSAEDT--NVSLM 476
4 -7.670IDP05461 conserved repeat domain protein [Bacillus anthracis str. Ames] BA_1618 [Bacillus anthracis str. Ames]  ali follow..  15 1684...GDTITF----TSVVTNDSIPNGTTFVPNSFKINNTNPQNSINIGNLNANASVTLSFQVNITTLPNPNPIPNQSSLQYRFISVIATKTASSAFAAVGDTITYTTTLTNSGNTTAN--TPVFI 1839
5 -7.300IDP02064 putative fimbrial chaperone [Yersinia pestis CO92] YPO3878 [Yersinia pestis CO92]  ali follow..  13  31.MTGSRIIYPAAASIQLTNNDNFP-NAVQVWLDSGDEKSTPETGKAPFINSGQTLRLKYTGSGLPTDLLRNRIKVFYRPESIIGRVDQVSTALTFSLRKQGTNLVLTGKNPTGFYATIASGEI. 190
6 -6.000IDP05612 putative lipoprotein [Bacillus anthracis str. Ames] BA_5233 [Bacillus anthracis str. Ames]  ali follow..  20  57................................................VKKGESWTFTFEDKTKQGT---IKAYVLDSNDNTILEVNSGNSKNNIKVSKDD-TYKVKIITGGEFEISWK..... 126
7 -5.810IDP01648 putative pili chaperone protein [Yersinia pestis CO92] YPO2944 [Yersinia pestis CO92]  ali follow..  13  31.ISGTRVIFPAAESIRTNNKGVQP-ALVQVWVDDGKTNANINSMKLPFMGKGQTVRMIYNGMALPQNAFRTRIKVFYRPTSLESNSAAQSAQLKWTLDDNQKGRGVKVVNPTPYYISFDSGSI. 192
8 -5.450IDP93873 putative fimbrial chaperone protein [Yersinia enterocolitica subsp. enterocolitica WA-314] EKA26882 [Yersinia enterocolitica subsp. enterocolitica WA-314]  ali follow..  12  26.IGGTRVIYDGAKTLSVNNQDKNIPYLIQSWVDNIEATNHNKVPFIPLFRQESNLRILFTGGNLPQDRESVTIPSSKKTNGNQLFISIKNRIKLFYRPAGRHGKQLQVSNPTAYYVSFHTLKV. 178
9 -5.420IDP05647 hypothetical protein CD3457 [Clostridium difficile 630] CD3457 [Peptoclostridium difficile 630]  ali follow..  10  62....................................MDKYTNEERALAAKIDNKIYIIVTRGNNKYGIEMDKIESVVEEGKDVLRVKIKYKDKEDSFP-----YIVVETNMSELPDRIE..... 139
10 -5.270IDP02464 putative chaperone protein [Yersinia pestis CO92] YPO1708 [Yersinia pestis CO92]  ali follow..  9  39.ISGTRVIYEEKQVVKVSNTGDMP-VLLQAWIDKGDANARPEAIKVPFSVTPPVVRL------DPKRDQTIRLFRLAADRETLFWFNLLEVPPKPIQSAAGGENKMQLAFRTRIKMFYRPEGLT 161
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 0 6 7   jobs submitted since Jan 1, 2011
Comments and questions to: webmaster
Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Pawlowski K, Pio F, Chu Z, Reed JC, Godzik A. PAAD - a new protein domain associated with apoptosis, cancer and autoimmune diseases. Trends Biochem Sci. 2001 Feb;26(2):85-7.