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Query: PF15919.5; E1VAV2_HALED/3-129; HicB_like antitoxin of bacterial toxin-antitoxin system, from PfamA32U

Results of FFAS03 search in CSGID
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst YPIAIEIADEQHAYSVVVPDLPGCFSAGDTFDEAVANAREAIEGHLESLSDHGDPIPKTTTIEQHLENPDYKGWVWATVEVDITPYLGKSHKINVTLPELLIKRIDTAVAKQGDVYQSRSGFLSRAALast
1 -7.060IDP04078 gene: YPCD1.09c; hypothetical protein YPCD1.09c [Yersinia pestis CO92] YPCD1.09c [Yersinia pestis CO92]  ali follow..  28  13.........................................................................................AHVTSVTLGEHLTGFVGEMIQS---RYGNISEVLRDA. 47
2 -6.140IDP02136 gene: metJ; transcriptional repressor protein MetJ [Yersinia pestis CO92] YPO0114 [Yersinia pestis CO92]  ali follow..  17  13................................................................................AEHGKKSKQVKKITVSIPLKVLKILTDERTRRQVNHATNSELLCEA. 61
3 -6.080IDP06052 hypothetical protein jhp0557 [Helicobacter pylori J99] NP_223275 [Helicobacter pylori J99]  ali follow..  16  6...........................AHTTIQALQAKRKRL---LTELAELEAEIKVSSERRSSFNVSLSPSLLAEIEEIEYEEKMSKERRINLLLSPSFMAKVDEYMKEKG--FPNRSLLFEKA. 101
4 -5.810IDP01310 outer membrane protein OmpH VC2251 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  7  57............................KDKAAELQAIQADAKTKIEKLKRDGQLMGQDEVEKLRIEIGQLDSKYKIKAQALEQASARREAEEKQKLFKVIQDAVKKVAEKEGYDIVLDTSSMQYGK 155
5 -5.650IDP06472 gene: E10R; E10R [Monkeypox virus Zaire-96-I-16] NP_536534 [Monkeypox virus Zaire-96-I-16]  ali follow..  11  110..DPATADNDRINA--IYPG--GIPKRGENVPECLREIKEEVNIDNSFVF............................................................................. 154
6 -5.620IDP01880 gene: yfaO; putative NTP pyrophosphohydrolase [Salmonella typhimurium LT2] STM2295 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]  ali follow..  17  17..YLLCKMADNRGVFPGQWALSG-VEPGERIEEALREIREELGEQLI................................................................................ 63
7 -5.510IDP02240 gene: ompH; outer membrane protein OmpH [Francisella tularensis subsp. tularensis SCHU S4] FTT1572c [Francisella tularensis subsp. tularensis SCHU S4]  ali follow..  8  51............................KPDATKLKQEQDNIMQQIKTLQDNSATMTKSELDKKQQQIQQEQQNFAEKARILQQKEYTAKDKLSKKFQASFDKAVQTIAKQKNYNVVLTTQALAYVN 149
8 -5.500IDP04253 gene: prs; phosphoribosylpyrophosphate synthetase [Clostridium perfringens ATCC 13124] CPF_1800 [Clostridium perfringens ATCC 13124]  ali follow..  7  245........DVDGKDVLIVDDM---IASGESVLDIAKELKGRNARNVYVATTFSFFTEGLEKFNKFFNDGIIKSVYSTNLTYIPEELKAAPWFKAVDLSDFIARIINRLNYDKSVA............ 348
9 -5.370IDP06467 gene: E9R; E9R [Monkeypox virus Zaire-96-I-16] NP_536533 [Monkeypox virus Zaire-96-I-16]  ali follow..  10  107................ILLG--GKLDKKESIKDCLRELKEESDEHIT................................................................................ 136
10 -5.100IDP02585 lipoprotein [Francisella tularensis subsp. tularensis SCHU S4] FTT1416c [Francisella tularensis subsp. tularensis SCHU S4]  ali follow..  11  20....................ISGCATDGYYITTLNYNFNTVYNATLQAIQNGQTFDYKSNPYDISVNKNNGTDAEIV-LQVAMKKLPNNATRISIKYSSALIGIIEGNIRYANT............. 137
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 0 9 7   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Ye Y, Jaroszewski L, Li W, Godzik A. A segment alignment approach to protein comparison. Bioinformatics. 2003 Apr 12;19(6):742-9.