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Query: PF01810.18; RHTC_ECOLI/13-206; LysE type translocator, from PfamA32U

Results of FFAS03 search in H.sapiens
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst IVALMSPGPDFFFVSQTAVSRSRKEAMMGVLGITCGVMVWAGIALLGLHLIIEKMAWLHTLIMVGGGLYLCWMGYQMLRGALKKEAVSAPAPQVELAKSGRSFLKGLLTNLANPKAIIYFGSVFSLFVGDNVGTTARWGIFALIIVETLAWFTVVASLFALPQMRRGYQRLAKWIDGFAGALFAGFGIHLIISRLast
1 -11.600sp|Q9HC07|TM165_HUMAN(removed signalp:1-33) Transmembrane protein 165 OS=Homo sapiens GN=TMEM165 PE=1 SV=1  ali follow..  11  70VIIVSELGDKTFFIA--AIMAMRYNRLTVLAGAMLALGLMTCLSVL-FGYATTVIP---VYTYYVSTVLFAIFGIRMLREGLKMSPDEGQEELEEVQAELKKKDEEFQRTKLLNGPTLTFLAEWSQLTTIVLAAREDPYGVAVGGTVGHCLCTGLAVIGGRMIAQK-----VRTVTIIGGIVFLAFAFSALFI. 285
2 -8.100sp|P55087|AQP4_HUMAN Aquaporin-4 OS=Homo sapiens GN=AQP4 PE=1 SV=2  ali follow..  13  47IFVLLSLGSTINWGGTEKPLPVDMVLISLCFGLSIATMVQCFGHISGVAMVCTRKSVFYIAAQCLGAI----IGAGILYLVTPPSVVGGLGVTMVHGNLTAG--HGLLVELI---TFQLVFTIFASCDSKRTDVTGSIALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMWVGPIIGAVLAGGLYEYVF.. 252
3 -7.590sp|Q8WUU8|TM174_HUMAN Transmembrane protein 174 OS=Homo sapiens GN=TMEM174 PE=2 SV=1  ali follow..  18  15.VFSVTPYTP----ADIQVSDDDKAGATLLFGIFLG-LVGITFTVMG-VSHFEWTQLLGPVLLSVGVTFILIAVCKFMLSCQLCKESEERVPDSEQTPGGPSF---VFTGINQP--ITFHGATVVQYIPPPYGSPEPMGI...................................................... 152
4 -7.340sp|Q9H2E6|SEM6A_HUMAN(removed signalp:1-18) Semaphorin-6A OS=Homo sapiens GN=SEMA6A PE=1 SV=2  ali   11  1..................LGAVSSHNHQDKKGVIRESYLKGHDQLVPVTLLAIAVILAFVMAVFSGITVYCVCDHRRKDVAVVQRKEKELTHSRRGSMSSVTKLSGLFGD--DPKPEAILTPLMHN.................................................................... 111
5 -7.260sp|Q01118|SCN7A_HUMAN Sodium channel protein type 7 subunit alpha OS=Homo sapiens GN=SCN7A PE=2 SV=2  ali   5......................KLGKYWPTFQILMWSLSNSWVALKDLVLLLFTFIFFSAA-----------FGMKLFGKNYEEFVCHIDKDCQLPRWHMHDFFHSFLN--------VFWVETLWDCMEVAGQSWCIPFYLMVILIGNLLVLYLFLALVSS................................. 130
6 -7.250sp|Q9HC58|NCKX3_HUMAN Sodium/potassium/calcium exchanger 3 OS=Homo sapiens GN=SLC24A3 PE=2 SV=4  ali   13  4FMAAGSSAPELFTSVIGVFITKGDVGV----GTIVGSAVFNILCIIGVCGLFAGQVVIYYTLSVI-LMYLIYIVIMKYNACIHQ.............................................................................................................. 113
7 -7.240sp|O95873|CF047_HUMAN Uncharacterized protein C6orf47 OS=Homo sapiens GN=C6orf47 PE=1 SV=2  ali follow..  18  194LLALCSRPLRAALDT---------LGLRGPLGLWLHGLLSFLAALHGLHAVLLLTAHPLHFACLFGLLQALVLAVSLREPNGDEAATDWESEGLEREGEEQR--KGL....................................................................................... 294
8 -7.210sp|Q9UJA3|MCM8_HUMAN DNA replication licensing factor MCM8 OS=Homo sapiens GN=MCM8 PE=1 SV=2  ali   14  1.LVVGDPGLGKSQMLQAACNVAPRGVYVCGNT----------TTTSGLTVTLSKDSSSGDFALEAGALVLGDQGICGIDEFDKMGNQHQALLEAMEQQSISLAKAGVVCSL-PARTSIIAAA........................................................................ 110
9 -7.180sp|Q9UJA3|MCM8_HUMAN DNA replication licensing factor MCM8 OS=Homo sapiens GN=MCM8 PE=1 SV=2  ali   15  150ILVVGDPGLGKSQMLQAACNVAPRGVYVCGNT----------TTTSGLTVTLSKDSSSGDFALEAGALVLGDQGICGIDEFDKMGNQHQALLEAMEQQSISLAKAGVVCSL-PARTSIIAAA........................................................................ 260
10 -7.110sp|Q15061|WDR43_HUMAN WD repeat-containing protein 43 OS=Homo sapiens GN=WDR43 PE=1 SV=3  ali   12  7.....LQTNSFPVLLTQGLESNDFEMLNKVLQTRNVNLIKKTVLRMPLHTIIPLLQELTKRLQ--AVLMVQWLKCVLTVHASYLSTLPDLVPQLGTLYQLMESRVKTFQKLSHLHGKLILLI........................................................................ 126

FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 0 9 7   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Ye Y, Jaroszewski L, Li W, Godzik A. A segment alignment approach to protein comparison. Bioinformatics. 2003 Apr 12;19(6):742-9.