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current user: public |
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Query: PF03992.16; HMOB_BACSU/65-140; Antibiotic biosynthesis monooxygenase, from PfamA32U |
. 10 . 20 . 30 . 40 . 50 . 60 . 70 . | |||||||
# | Score | Template | Links and tools | %id | First | GFAVLNNIAVTQEGRPLFENRFKNRAGKVENEPGFEAIRVLRPLDSDTYVILTLWETESAFQDWQQSGSYKEAHKK | Last |
1 | -23.800 | sp|Q7Z6G3|NECA2_HUMAN N-terminal EF-hand calcium-binding protein 2 OS=Homo sapiens GN=NECAB2 PE=1 SV=1 | ali follow.. | 25 | 286 | .QLVRQEMAVCPEQLSEFLDSLRQYLRGTTGVRNCFHITAVRLSDGFTFVIYEFWETEEAWKRHLQSPLCKAFRHV | 360 |
2 | -23.000 | sp|Q8N987|NECA1_HUMAN N-terminal EF-hand calcium-binding protein 1 OS=Homo sapiens GN=NECAB1 PE=1 SV=1 | ali follow.. | 18 | 252 | .MLVQRQMSVIEEDLEEFQLALKHYVESASSQSGCLRISIQKLSNESRYMIYEFWENSSVWNSHLQTNYSKTFQRS | 326 |
3 | -15.700 | sp|Q96P71|NECA3_HUMAN N-terminal EF-hand calcium-binding protein 3 OS=Homo sapiens GN=NECAB3 PE=1 SV=2 | ali follow.. | 16 | 296 | .LMAQRQVQVAEEGLQDFHRALRCYVDFTGAQSHCLHVSAQKMLDGASFTLYEFWQDEASWRRHQQSPGSKAFQRI | 370 |
4 | -8.040 | sp|Q9BS92|NPS3B_HUMAN Protein NipSnap homolog 3B OS=Homo sapiens GN=NIPSNAP3B PE=2 SV=1 | ali follow.. | 6 | 36 | .FYEFRTYYLKPSNMNAFMENLKKNIHLRTSYSELVGWSVEFGGRTNKVFHIWKYDNAEVRKALANCKEWQEQSII | 115 |
5 | -7.070 | sp|Q9UFN0|NPS3A_HUMAN(removed signalp:1-18) Protein NipSnap homolog 3A OS=Homo sapiens GN=NIPSNAP3A PE=1 SV=2 | ali follow.. | 9 | 18 | .FYEFRSYYLKPSKMNEFLENFEKNAHLRTAHSELVGYSVEFGGRMNTVFHIWKYDNFAHRTEVRKA......... | 84 |
6 | -6.620 | sp|Q9BPW8|NIPS1_HUMAN Protein NipSnap homolog 1 OS=Homo sapiens GN=NIPSNAP1 PE=1 SV=1 | ali follow.. | 4 | 183 | NIYELRTYKLKPGTMIEWGNNWARAIKYRQENQEAVGGFFSQIGELYVVHHLWAYKDLQSREETRNA......... | 249 |
7 | -5.680 | sp|O75323|NIPS2_HUMAN Protein NipSnap homolog 2 OS=Homo sapiens GN=GBAS PE=1 SV=1 | ali follow.. | 5 | 185 | NIYELRSYQLRPGTMIEWGNYWARAIRFRQDGNEAVGGFFSQIGQLYMVHHLWAYRDLQT-NAAWHKHGWEELVYY | 264 |
8 | -5.450 | sp|Q9Y5L5|LENEP_HUMAN Lens epithelial cell protein LEP503 OS=Homo sapiens GN=LENEP PE=2 SV=1 | ali follow.. | 20 | 33 | .................................GTGWEGFQRTLKEVAYILLCCWCIKELLD.............. | 61 |
9 | -5.400 | sp|Q99570|PI3R4_HUMAN Phosphoinositide 3-kinase regulatory subunit 4 OS=Homo sapiens GN=PIK3R4 PE=1 SV=3 | ali | 2 | 51 | .VVKVFAIQDPTLPLTSYKQELEELKIRLNSAQNCLPFKASEKASEKAAMLFRQYVRDNLYDRISTRPFLNNIEKR | 126 |
10 | -4.770 | sp|P32927|IL3RB_HUMAN(removed signalp:1-22) Cytokine receptor common subunit beta OS=Homo sapiens GN=CSF2RB PE=1 SV=2 | ali | 15 | 222 | ..........PGPEIKNLDQAFQVKKPPGQAVPQVPVIQLFKALKQQDYLSLPPWEVNKPGE.............. | 273 |
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Friedberg I, Harder T, Kolodny R, Sitbon E, Li Z, Godzik A. Using an alignment of fragment strings for comparing protein structures. Bioinformatics. 2007 Jan 15;23(2):e219-24. |