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Query: PF05283.11; F6ZX51_ORNAN/2-123; Multi-glycosylated core protein 24 (MGC-24), sialomucin, from PfamA32U

Results of FFAS03 search in H.sapiens
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120
# Score Template Links and tools%idFirst ICTGQNCSACLGPSVGNSSCFWLECSGKSYCSDSPSVENCTAENKTEDCSAATTTRPSPTSSSVTTQTTPNATATPVTPSPRKSSFDAASFIGGIVLVLGVQAVVFFLYKFCKSKERNYHTLLast
1 -50.700sp|Q6UWJ8|C16L2_HUMAN(removed signalp:1-29) CD164 sialomucin-like 2 protein OS=Homo sapiens GN=CD164L2 PE=1 SV=2  ali follow..  35  25.CQLEVCEHCVEGARNLSSCMWEQCRGHCVAQSEVVKEGCSIYNRSEACPAAHHHP--------TYEPKTVTTGSPPVPEAHSPGFDGASFIGGVVLVLSLQAVAFFVLHFLKAKDSTYQTL 144
2 -38.300sp|Q04900|MUC24_HUMAN(removed signalp:1-23) Sialomucin core protein 24 OS=Homo sapiens GN=CD164 PE=1 SV=2  ali follow..  59  42....NSCVSCFNVSVVNTTCFWIECKDESYCSHNSTVSDCQVGNTTDFCSVSTATPVPTANSTVTTSGTTNNTVTPTSQPVRKSTFDAASFIGGIVLVLGVQAVIFFLYKFCKSKERNYHTL 174
3 -14.300sp|O75578|ITA10_HUMAN(removed signalp:1-22) Integrin alpha-10 OS=Homo sapiens GN=ITGA10 PE=2 SV=2  ali   118.GSNTQCQRCHLGQLAKGTEVSVGLLRL-VHNEFFRRAKFKSLTVVSTFELGTEEGSVLQLTEASRWSESLLEVVQTRPILISLWILIGSVLGGLLL-LALLVFCLWKLGFFAHKKIP.... 234
4 -13.900sp|P11215|ITAM_HUMAN(removed signalp:1-16) Integrin alpha-M OS=Homo sapiens GN=ITGAM PE=1 SV=2  ali   14  106.CSIAVCQQCDIPFFGIQEEFNATLKGNLSFDWYIKTSHNHLLIVSTAEILFNDSVFTLLPGQGAFVRSQTETKVEPFEVPNPLPLIVGSSVGGLLL-LALITAALYKLGFFKRQ....... 220
5 -13.900sp|Q13349|ITAD_HUMAN(removed signalp:1-17) Integrin alpha-D OS=Homo sapiens GN=ITGAD PE=1 SV=2  ali   12  100.CSIADCLRCDVPSFSVQEELDFTLKGNLSFGWVRETLQKKVLVVSVAEITFDTSVYSQLPGQEAFMRAQMEMVLEEDEVYNAIPIIMGSSVGALLL-LALITATLYKLGFFKRH....... 214
6 -13.800sp|P20702|ITAX_HUMAN(removed signalp:1-19) Integrin alpha-X OS=Homo sapiens GN=ITGAX PE=1 SV=3  ali   15  103.CSIAGCLRCDVPSFSVQEELDFTLKGNLSFGWVRQILQKKVSVVSVAEITFDTSVYSQLPGQEAFMRAQTTTVLEKYKVHNPTPLIVGSSIGGLLL-LALITAVLYKVGFFKRQYKE.... 220
7 -13.200sp|P13612|ITA4_HUMAN(removed signalp:1-33) Integrin alpha-4 OS=Homo sapiens GN=ITGA4 PE=1 SV=3  ali   108.............IKADPHCLNFLCNFGKMESGKEASSALKFEIRATGFPEPNPRVIELNKDENVAHVLLEGLHHQRPKRYFTIVIISSSLLLGLIV-LLLISYVMWKAGFFKRQYKS.... 228
8 -12.300sp|Q13145|BAMBI_HUMAN(removed signalp:1-20) BMP and activin membrane-bound inhibitor homolog OS=Homo sapiens GN=BAMBI PE=1 SV=1  ali follow..  18  12.CDAAHCVACFSNSPLTHGCL-DICQAKQARNHSGTTDMCNYRGLHDVLSPPRGEASGQGNRYQHDGSRNLITKVQELTSSKELWFRAAPIAGGLILVLLIM----LALRMLRSENKRLQD. 165
9 -12.300sp|P56199|ITA1_HUMAN(removed signalp:1-28) Integrin alpha-1 OS=Homo sapiens GN=ITGA1 PE=1 SV=2  ali   12  133.............DCNTCKFATITCNSLILWKPTFIKSYFSSLNLTIRGELRSENASLVLSSSNQKRELAIQISKDGLPGRVPLWVILLSAFAGLLL-LMLLILALWKIGFFKRPLKK.... 247
10 -12.000sp|Q9C0A0|CNTP4_HUMAN(removed signalp:1-25) Contactin-associated protein-like 4 OS=Homo sapiens GN=CNTNAP4 PE=1 SV=3  ali   11  84...........AGAQGFTGCL-------KAALHPSHPDPVTVTGHVTESSCMAQPGTDATSRERTHSFADHSGTIDDREPLANAIKSDSAVIGGLIVIFILLCITAIAVRIYQQK-RLYKR. 198
11 -11.600sp|Q9UKX5|ITA11_HUMAN(removed signalp:1-22) Integrin alpha-11 OS=Homo sapiens GN=ITGA11 PE=1 SV=2  ali   11  137.............NHSNSDVVSINCNLGNLWLRSLKALKYKSMKIMVNAALQRQFHSPFIFREEDPSRQIVFEISKQEDWQVPIWIIVGSTLGGLLL-LALLVLALWKLGFFRSARRR.... 253
12 -11.400sp|Q13797|ITA9_HUMAN(removed signalp:1-31) Integrin alpha-9 OS=Homo sapiens GN=ITGA9 PE=1 SV=2  ali   12  111.............EKPGISCLTAHCNFSALAKEESRTIDIYMSRAKVKVDPALRVVEIAHGNPEEVTVVFEALHNLEPRGYVVGWIIAISLLVGILIFL-LLAVLLWKMGFFRRRYKE.... 232
13 -10.900sp|Q96NU0|CNT3B_HUMAN(removed signalp:1-25) Contactin-associated protein-like 3B OS=Homo sapiens GN=CNTNAP3B PE=2 SV=2  ali   86.............TSGFTGCL-APLKAALRPSGPSRVTVRGHVAPMARCAAGAASGSPARELAPRLAGGAGRSGPVDEGEPLVNADRRSAVMGGVIAVV-LLCITAIAIRIYQQR-KLRKE. 202
14 -10.400sp|P23229|ITA6_HUMAN(removed signalp:1-23) Integrin alpha-6 OS=Homo sapiens GN=ITGA6 PE=1 SV=4  ali   14  191..........TLNCSVNVNCVNIRCPLRGLDSKASLILRSRLWNSTLMRAFIDVTAAAENIRLPNAGTQVRVTVFPSKTVAQYSGVPWWIILVAILAGILMLALLVF............... 300
15 -10.100sp|P04921|GLPC_HUMAN Glycophorin-C OS=Homo sapiens GN=GYPC PE=1 SV=1  ali follow..  15............................................SLEPDPGMASASTTMHTTTIAEPDPGMSGWPDGRMETSTPTIMDIVVIAGVIVAIVLVSLLFVMLRYMYRHKGTYHT. 93
16 -10.000sp|Q9BZ76|CNTP3_HUMAN(removed signalp:1-25) Contactin-associated protein-like 3 OS=Homo sapiens GN=CNTNAP3 PE=2 SV=3  ali   86.............TSGFTGCL-APLKAALRPSGPSRVTVRGHVAPMARCAAGAASGSPARELAPRLAGGAGRSGPADEGEPLVNADRRSAVIGGVIVIFILLCITAIAIRIYQQR-KLRKE. 202
17 -10.000sp|Q5VU97|CAHD1_HUMAN(removed signalp:1-37) VWFA and cache domain-containing protein 1 OS=Homo sapiens GN=CACHD1 PE=1 SV=2  ali   16  82.CVNSRCSDCFG----VLDCEW--C---------MVDSDGKTHLDKPYCAPQKECFGGIVGAKSPYVDDMGAIGDEVITLNMIKSAPVGPVAGGIMGCIMVLVLAVYAYRHQIHRRSHQHMS 193
18 -10.000sp|Q9UHC6|CNTP2_HUMAN(removed signalp:1-27) Contactin-associated protein-like 2 OS=Homo sapiens GN=CNTNAP2 PE=1 SV=1  ali   14  128..........IQGELVESNCGASPLTLSPMSSATDPWHLDHLDSASADFPYNPGQGQAIRNGVNRNS----------------------AIIGGVVVIFTILCTLVFLIRYMFRHKGTYHT. 218
19 -9.970sp|P17301|ITA2_HUMAN(removed signalp:1-29) Integrin alpha-2 OS=Homo sapiens GN=ITGA2 PE=1 SV=1  ali   18  131.CWLKDVHMKGEYFVNVTTRIWNGTFASSTFQTVQLTAAAEI----------NTYNPEIYVIEDNTVTIPLMIMKPDEKAEVPTGVIIGSIIAGILLLLALVAILW--LGFFKRKYEK.... 236
20 -9.740sp|Q8WYK1|CNTP5_HUMAN(removed signalp:1-24) Contactin-associated protein-like 5 OS=Homo sapiens GN=CNTNAP5 PE=2 SV=1  ali   10  82...........ANAMGFAGCM-------KAALRHATVAPVTVHGTLTESSCGFMVDSDVNAVTTVHSSSDPFGKTDEREPLTNAVRSDSAVIGGVIAVVIFIIFCIIGIRFLYQHKQSHRT. 197
21 -9.600sp|P53708|ITA8_HUMAN(removed signalp:1-38) Integrin alpha-8 OS=Homo sapiens GN=ITGA8 PE=1 SV=3  ali   11  136.CTNIECLSCAVGRLEGGESAVLKVRSRLWAHTFLQRKNDPYALASLVSFEVKKMPYTDQPAKLPEGSIVIKTSVIWATPNVSFSIPLWVIILAILLVLAILTLALWKCGFFDRARPPQED. 260
22 -9.420sp|P38570|ITAE_HUMAN(removed signalp:1-18) Integrin alpha-E OS=Homo sapiens GN=ITGAE PE=1 SV=3  ali   15  130...............HVEEWHSVSCVIASDKENVTVAAEISWDHSEELLKDVTELQILGEISNAENHRTKITVVFLKDEKYHSLPIIIKGSVGGLLV-LIVILVILFKCGFFKRK---YQQL 241
23 -9.400sp|Q5T2D2|TRML2_HUMAN(removed signalp:1-18) Trem-like transcript 2 protein OS=Homo sapiens GN=TREML2 PE=1 SV=2  ali follow..  19  194.................................TASPSNARDSSAGPESISTKSGDLSTRSPTTGLCLTSRSLLNRLPSMPSIRHQDVYSTVLGVVLTLLVLMLIMV-YGFWKKRHASYS.. 280
24 -9.370sp|P26006|ITA3_HUMAN(removed signalp:1-32) Integrin alpha-3 OS=Homo sapiens GN=ITGA3 PE=1 SV=4  ali   16  120..........LTCATGRAHCVWLECPIPDAPVVTNVTVKARVWNSTATLFLRTSIPTINMENKTTWFSVDIDSELVEELPAEIELWLVLVAVGAGLLLLGLIILLLWKCDFFKRTR...... 241
25 -9.280sp|P06756|ITAV_HUMAN(removed signalp:1-30) Integrin alpha-V OS=Homo sapiens GN=ITGAV PE=1 SV=2  ali   13  124.CGVAQCLVCQVGRLDRGKSAILYVKSLLWTETFMNKENQNHSYSLKSSASFNVIEFPYKNLPIEDITNSTLVTTNVTWGIQPAPMPVPVWVIILAVLAGLLVLVFVMYRFFKRVR...... 245
26 -9.280sp|Q9HDB5|NRX3B_HUMAN(removed signalp:1-35) Neurexin-3-beta OS=Homo sapiens GN=NRXN3 PE=1 SV=4  ali   20  42.....................................................ITSPMFRNVPTANPTEPGIRRVPGASEVIRESSSTTGMVVGIVAALCILILLYAMYKYRNRDEGSYQV. 111
27 -9.170sp|Q16617|NKG7_HUMAN(removed signalp:1-24) Protein NKG7 OS=Homo sapiens GN=NKG7 PE=1 SV=1  ali follow..  14  22.GHGDIISGYIHVTQTFSIMAVLWA---SVSFLVLSCFPSLFPPGHGPLVSTTAAFAAAISMVVAMAVYTSERWDQPPHPQIQTFFSWSFYLGWVSAILLLCTGALSLGAHCGGPRPGYETL 141
28 -9.110sp|P08648|ITA5_HUMAN(removed signalp:1-41) Integrin alpha-5 OS=Homo sapiens GN=ITGA5 PE=1 SV=2  ali   11  119.............KCPEAECFRLRCELGPLHQQESQSQREHQPFSLQCEAVYKALKMPYRILPRQLPQKERQVATAVQWTKAEGSYGVPLWIIILAILFGLLLLGLYKLGFFKRSL...... 239
29 -9.100sp|P20701|ITAL_HUMAN(removed signalp:1-25) Integrin alpha-L OS=Homo sapiens GN=ITGAL PE=1 SV=3  ali   12  91.GALFRCPVVFRQEILVQ---------IGTLELVGEIEASSMFSLCSSLSISFNSSKHFHLYGSNASLAQVVMKVDVVYEKQMLYLYVLSGIGGLLL-LLLIFIVLYKVGFFKRN....... 195
30 -9.070sp|Q3ZCQ3|F174B_HUMAN(removed signalp:1-26) Membrane protein FAM174B OS=Homo sapiens GN=FAM174B PE=2 SV=1  ali follow..  1............................SRAESVSAPRPEPERESRPPPGPGPGNTTRFGSGAAGGSGSSNSSGDALVTRISILLRDLPTLKAAVIVAFAFTTIACLLLRVFRKKTRKYDII 101
31 -9.060sp|Q86UP6|CUZD1_HUMAN(removed signalp:1-24) CUB and zona pellucida-like domain-containing protein 1 OS=Homo sapiens GN=CUZD1 PE=2 SV=1  ali follow..  13  474.CKVLICDSSDHQSRCNQGCV----------------SRSKRDISSYKWKTDSIIGPIRLKRDRSASGNSGFQHETHAEETPNQPFNSVHLFSFMVLALNVVTVATITVRHFVNQRAKYQKL 580
32 -9.050sp|P31431|SDC4_HUMAN(removed signalp:1-18) Syndecan-4 OS=Homo sapiens GN=SDC4 PE=1 SV=2  ali follow..  12  69...............................NHIPERAGSGSQVPTEPKKLEENEVIPKRISPVEESEDVSNKVSMSSTVQGSNIFERTEVLAALIILFAVFLILLLMYRMKKKDEGSY... 162
33 -9.000sp|Q9HCM2|PLXA4_HUMAN(removed signalp:1-23) Plexin-A4 OS=Homo sapiens GN=PLXNA4 PE=1 SV=4  ali   16  33.CVHNSCLSCVESP---YRCHWCKYRHVCTHDPKTCSFQEGRVKLPEDCPQLLRVDKILVPVEVIKPITLKAKNLPQPQSGQRG...................................... 113

FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 3 1 3   jobs submitted since Jan 1, 2011
Comments and questions to: webmaster

Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Zhang Y, Stec B, Godzik A. Between order and disorder in protein structures: analysis of "dual personality" fragments in proteins. Structure. 2007 Sep;15(9):1141-7.