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Query: PF05635.11; K7WXD0_9NOST/8-110; 23S rRNA-intervening sequence protein, from PfamA32U

Results of FFAS03 search in H.sapiens
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst EDLIVWQKAHQFVLEVYQITGNFPKSEIYGLASQFRRASISIPANIAEGFKKKGDLDKVRFMNIAQASLEECRYYLILTKDLGYANTSESMLKLQEVSRLLDSLast
1 -7.000sp|Q96QP1|ALPK1_HUMAN Alpha-protein kinase 1 OS=Homo sapiens GN=ALPK1 PE=2 SV=3  ali   19  55QKLGMWYEAAELIWASIVGYLALPQPDKKGLS-----TSLGILADIFVSMSKNDYEKFKNNPQINLSLLKEFDHHLLSAAE...................... 130
2 -6.940sp|Q9ULN7|PNML2_HUMAN PNMA-like protein 2 OS=Homo sapiens GN=PNMAL2 PE=2 SV=2  ali   8  193EAEDSSDESLGIVIEEIDQGDLSGEEDQSALYATLQAAARELVRQWAPCNSEGEEDGPREFLALVTVTDKSKKEEAEKEPAGAESIRLNTKEDKNGVPDLVA. 294
3 -6.580sp|Q8TE73|DYH5_HUMAN Dynein heavy chain 5, axonemal OS=Homo sapiens GN=DNAH5 PE=1 SV=3  ali   15  74DAFRLWMTTEQFPITLLQMSIKFANDPPQGLRAGLKRTYSGVSQDLLDVSSGSQWKPMLYAVAFLHSTVQERRKFGALGWNIPYFNQADFNATVQFIQNHLD. 179
4 -6.520sp|Q8IVF4|DYH10_HUMAN Dynein heavy chain 10, axonemal OS=Homo sapiens GN=DNAH10 PE=1 SV=4  ali   15  60PDFRLWDPTKGFPIGILQKSLKVVTEPPNGLKLNMRATYFKISHEMLDQCPHPAFKPLVYVLAFFHAVVQERRKFGKIGWNVYYFNESDFQVCMEILNTYLT. 165
5 -6.480sp|Q8NCM8|DYHC2_HUMAN Cytoplasmic dynein 2 heavy chain 1 OS=Homo sapiens GN=DYNC2H1 PE=1 SV=4  ali   15  53DTFRLWEVHPNFTPILLQSSLKITYESPPGLKKNLMRTYESWTPEQISKKDNTHRAHALFSLAWFHAACQERRNYIPQGWTKFYFSLSDLRAGYNIIDRLFDG 159
6 -6.380sp|Q86XA9|HTR5A_HUMAN HEAT repeat-containing protein 5A OS=Homo sapiens GN=HEATR5A PE=1 SV=2  ali   10  1.................................QGRYEIMLSLQNILNGLGAAAAPCHRDVYKAARSCLTDRSMAVRCAA-AIFMWSTDLDSVATLCFKSFEG 73
7 -6.280sp|Q96BY2|MOAP1_HUMAN Modulator of apoptosis 1 OS=Homo sapiens GN=MOAP1 PE=1 SV=1  ali follow..  8  179EEFGRWMFHTTQMIKAWQVPDV---EKRRRLLESLRGPALDVIRVLKINNPLITVDECLQALEEVFGVTDNPRELQVKYLTTYQKDEEKLSAYVLRLEPLLQ. 277
8 -6.260sp|Q9Y620|RA54B_HUMAN DNA repair and recombination protein RAD54B OS=Homo sapiens GN=RAD54B PE=1 SV=1  ali   9  3...RVWRDGQKYPVHIYRLLTTGTIEEKI-YQRQISKQGLCVDLTKTSEHIQFSVEELKNLFTLHESSDCVTHDLL........................... 77
9 -6.220sp|Q8NI27|THOC2_HUMAN THO complex subunit 2 OS=Homo sapiens GN=THOC2 PE=1 SV=2  ali   12  195..LSLMDCNACMSEELWGMFKTFPYQHRYRLYGQWKNETYNSHPLLVKVKAQTIDRAKYIMKRLTKENVKPSGRQI-LSHSNPTILFDYILSQIQKYDNLIT. 295
10 -6.220sp|Q8ND90|PNMA1_HUMAN Paraneoplastic antigen Ma1 OS=Homo sapiens GN=PNMA1 PE=1 SV=2  ali follow..  14  175ETFDPWLEHTNEVLEEWQVSDV---EKRRRLMESLRGPAADVIRILKSNNPAITTAECLKALEQVFGSVESSRDAQIKFLNTYQNPGEKLSAYVIRLEPLLQ. 273
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 3 1 9   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Ye Y, Godzik A. Multiple flexible structure alignment using partial order graphs. Bioinformatics. 2005 Mar 3;