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Query: PF08856.11; Q605G4_METCA/25-225; Protein of unknown function (DUF1826 topsan), from PfamA32U

Results of FFAS03 search in H.sapiens
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst SDDIADLACIYQPDVNLCLIRREPEPAIERFVGELLKRGEAIESSQALSFEHFDFSSLLPEYRALEGHDPWWRDVARLTVAFCDLFETGSVGLRLRTLNQAMCPRFHVDFVPCRLVCTYGGLGTEWLADDEVDRSKLGLAGSKGLADEDSGLILGRVRAMPAHAVALMKGATWAGRDYPGVVHRSPRPTSEQPRRLLLTLDLast
1 -10.700sp|O00469|PLOD2_HUMAN(removed signalp:1-25) Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 OS=Homo sapiens GN=PLOD2 PE=1 SV=2  ali   7  95..................IFSEKACDELVEEMEHYGKWSGGKHHDSRISGGYENVPTDDIHMKQVDLENVWLHFIREFIAPVTLKV-ALLNFVVKYSPERQRSLRPHHDASTFTINIAFQGGGCKFLRYN------------------------CSIESPRKGWSFMHPGRL---------LHEGLPVKNGTRYIAVSFID 261
2 -9.980sp|Q02809|PLOD1_HUMAN(removed signalp:1-18) Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 OS=Homo sapiens GN=PLOD1 PE=1 SV=2  ali   8  92..................IFTEVACDELVEEMEHFGQWSLGNNKDNRIQGGYENVPTIDIHMNQIGFEREWHKFLLEIAPMTEKLYPGYYTRAQFDLADEQPSLMPHHDASTFTINIAYEGGGCRFLRYN------------------------CSIRAPRKGWTLMHPGRL---------YHEGLPTTRGTRYIAVSFVD 258
3 -9.820sp|Q6N063|OGFD2_HUMAN 2-oxoglutarate and iron-dependent oxygenase domain-containing protein 2 OS=Homo sapiens GN=OGFOD2 PE=2 SV=2  ali follow..  10  123LKGLLQRLETVSEEKRIYRVPVFTAPFCQALLEELEHFEQSDMPKGRPNTMNNYGVLLHELGLDEPLMTPLRERLQPLMALLYPDCGGGRLDSHRAFVGQDLELGCHYDNAELTLNVAFTGGALYF----------------GGLFQAPTALTEPLEVEHVVGQGVLHRGG---------QLHGARPLGTG--ERWNLVV. 305
4 -9.700sp|O60568|PLOD3_HUMAN(removed signalp:1-24) Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3 OS=Homo sapiens GN=PLOD3 PE=1 SV=1  ali   11  97..................LLSEQMCDELVAEMEHYGQWSGGRHEDSRLAGGYENVPTVDIHMKQVGYEDQWLQLLRTYVGPMTESLRAVMNFVVRYRPDEQPSLRPHHDSSTFTLNVAYEGGGCRFLRYDCVI-------------------------SPRKGWALLHPGRL---------YHEGLPTTWGTRYIMVSFVD 263
5 -9.630sp|Q9H6W3|NO66_HUMAN Lysine-specific demethylase NO66 OS=Homo sapiens GN=NO66 PE=1 SV=2  ali   11  2....................................................................QAFSTTVWQFLAVLQEQFGSMAGSNVYLTPPNSQGFAPHYDDIEA-FVLQLEGR-KLWRVYRPRVPTEELALTSSPNFSQDDLGEPVLQTVLEPGDLLYF----------RGFIHQAECQDGVHSLHLTLST. 122
6 -9.220sp|Q9H6W3|NO66_HUMAN Lysine-specific demethylase NO66 OS=Homo sapiens GN=NO66 PE=1 SV=2  ali   11  152....................................................................QAFSTTVWQFLAVLQEQFGSMAGSNVYLTPPNSQGFAPHYDDIEA-FVLQLEGR-KLWRVYRPRVPTEELALTSSPNFSQDDLGEPVLQTVLEPGDLLYFP---------RGFIHQAECQDGVHSLHLTLST. 272
7 -8.360sp|Q5SRE7|PHYD1_HUMAN Phytanoyl-CoA dioxygenase domain-containing protein 1 OS=Homo sapiens GN=PHYHD1 PE=1 SV=2  ali follow..  13  122............................................................................KVQTLARSLGLQMPVVVQSMYIFKQP--SPHQDAIAVEDATLENGPGSH-SRRMVRAPVGSAPGTSFLGSEPARDNSLFVPTPVQRGALVLIHGE---------VVHKSKQ-NLSDRSRQAYTF. 262
8 -8.250sp|Q8N543|OGFD1_HUMAN 2-oxoglutarate and iron-dependent oxygenase domain-containing protein 1 OS=Homo sapiens GN=OGFOD1 PE=1 SV=1  ali follow..  11  116...................................................................RKILFEDFRSWLSDISKIDLESTIDMSCAKYEFTDALLCHDDELEGRRIAFILYLVPPWDRSMGGTLDLYSIDEHFQPKQIVKSLIPS-------NKLVFFE-------VSPVSFHQVSEVLSEEKSRLSIS.. 234
9 -8.100sp|O14832|PAHX_HUMAN Phytanoyl-CoA dioxygenase, peroxisomal OS=Homo sapiens GN=PHYH PE=1 SV=1  ali follow..  7  54..TLEQRKFYEENGFLVILVPDADIQRFRNEFEKICRKEVDVTISKSEYAPSEKMITKVQDFQEDKELFRYCTL-PEILKYVECFTGPNHTMLINKPPDSGKKTSRHPLHTAMEHISRNNGPGTH-LKPHDYPKWEGGVNKMFHGIQDYEENKARVHLVMEKGDTVFFHPL---------LIHGSGQ-NKTQGFRKAISC. 280
10 -7.840sp|Q13686|ALKB1_HUMAN Alkylated DNA repair protein alkB homolog 1 OS=Homo sapiens GN=ALKBH1 PE=1 SV=2  ali follow..  14  192......................................................................FPSDLGFLSEQVAAACGFEDFRAELNYYRLDSTLGIHVDRSEL-LLSFSFGQSAIFLLGGLQRDEAPTA-------------------FMHSGDIMIMSG------FSRLLNHAVPRVLPNPEGEGLPH.. 303
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 3 4 1   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Jaroszewski L, Slabinski L, Wooley J, Deacon AM, Lesley SA, Wilson IA, Godzik A. Genome pool strategy for structural coverage of protein families. Structure. 2008 Nov 12;16(11):1659-67.