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current user: public |
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Query: PF08975.10; B9JYZ4_AGRVS/31-145; Domain of unknown function (DUF1868 topsan), from PfamA32U |
. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . | |||||||
# | Score | Template | Links and tools | %id | First | RFDAEGNFLPEPGNTIVCHLRAGSESQKAIVALQERYKQMPEADHLAVTPASSLHMTLFQGIIEYRRTAVFWPKDLPLDAPIDDMTEILAQRLTYFAPGPDFRMKIARMLPTGLR | Last |
1 | -12.400 | sp|Q9P0M2|AKA7G_HUMAN A-kinase anchor protein 7 isoform gamma OS=Homo sapiens GN=AKAP7 PE=2 SV=1 | ali follow.. | 18 | 64 | .............NYFLSIPITNKEIIKGIKILQNAIIQQDERLAKAMVSDGSFHITLLVMQLLNEDEVN----------IGIDALLELKPFIEELLQGKHLTLPFQGIGTFGNQ | 155 |
2 | -12.000 | sp|Q96B70|LENG9_HUMAN Leukocyte receptor cluster member 9 OS=Homo sapiens GN=LENG9 PE=2 SV=2 | ali follow.. | 15 | 321 | .............THFVALMVTEPGLQAEVTKAQEYLVHVAPHCANFLVPSQNLHLTLA---------------RLAGAGEEAAAIGALRRALLAPGLNAPPRLSFRKLVLLGPH | 409 |
3 | -7.700 | sp|Q8N9N2|ASCC1_HUMAN Activating signal cointegrator 1 complex subunit 1 OS=Homo sapiens GN=ASCC1 PE=1 SV=1 | ali follow.. | 12 | 164 | ...............FLAFFLNEVEVQEGFLRFQEEVLAKCSMDH-IFQNPKKLHLTIGMLVLLSEEE---------IQQTCEMLQQCKEEFINDISGGKPLEVEMAGI...... | 252 |
4 | -6.360 | sp|Q9UBT6|POLK_HUMAN DNA polymerase kappa OS=Homo sapiens GN=POLK PE=1 SV=1 | ali | 9 | 106 | HLTRDGERKSMSVERTFSEINKAEEQYSLCQELCSELAQDLQKERLK----RTVTIKLKNVNFEVKTRASTVSSVVSTAEEIFAIAKELLKTEIDADFPHPLRLRLMGVRISSF. | 216 |
5 | -6.280 | sp|Q5JX71|CT106_HUMAN(removed signalp:1-19) Uncharacterized protein C20orf106 OS=Homo sapiens GN=C20orf106 PE=2 SV=1 | ali follow.. | 11 | 82 | KKRNASPNKDCAFNTLMELEVELMKFVSKVRNLKRAMATGSGSNL-SEMPADPYHVTICEIWGEESSS............................................... | 152 |
6 | -5.880 | sp|Q5JX69|CT107_HUMAN(removed signalp:1-19) Uncharacterized protein C20orf107 OS=Homo sapiens GN=C20orf107 PE=1 SV=1 | ali follow.. | 11 | 82 | KNQNASLYKDCVFNTLNELEVELLKFVSEVQNLKGAMATGSGSNL-SEMPADPYHVTICKIWGEESSS............................................... | 152 |
7 | -5.860 | sp|A1L390|PKHG3_HUMAN Pleckstrin homology domain-containing family G member 3 OS=Homo sapiens GN=PLEKHG3 PE=1 SV=1 | ali | 6 | 40 | ............SVAALTECMRDKQQAKFFRDRQELLQHSLPLGSYLLKPVQKYHLLLQEIAKHFDEEEDGFEVVEDAIDTMTCVAWYINDMKRRHEHAVRLQ............ | 133 |
8 | -5.820 | sp|Q9H7P9|PKHG2_HUMAN Pleckstrin homology domain-containing family G member 2 OS=Homo sapiens GN=PLEKHG2 PE=1 SV=3 | ali | 6 | 49 | ............SLALLRELSLSPPAALWLQERQAQLRHSLPLQSFLLKPVQKYHLLLQELGKHWAEGPEMVEEAIVSMTAVAWYINDMKRKQEHAARLQEVQRRLGGWTGPELS | 159 |
9 | -5.590 | sp|Q6Q759|SPG17_HUMAN Sperm-associated antigen 17 OS=Homo sapiens GN=SPAG17 PE=1 SV=1 | ali | 18 | 194 | .............................LQVLQEAHKQYRCVDSYYHTQDNSLLLVFHNPMNRQRLHCEYWNIALHSNVGFRNYLELVAKSIQDWITKEEAIYQ.......... | 269 |
10 | -5.570 | sp|Q8IVF5|TIAM2_HUMAN T-lymphoma invasion and metastasis-inducing protein 2 OS=Homo sapiens GN=TIAM2 PE=2 SV=4 | ali | 3 | 11 | ............VQKVLERAKTDKAFKAFLDARNPTKQHSSTLESYLIKPVQKYPLLLKELVSLTDQESEEHYHLTEALKAMEKVASHINEMQKIYEDYGTV............. | 103 |
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Grynberg M, Godzik A. NERD: a DNA processing-related domain present in the anthrax virulence plasmid, pXO1. Trends Biochem Sci. 2004 Mar;29(3):106-10. |