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current user: public |
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Query: PF15919.5; E1VAV2_HALED/3-129; HicB_like antitoxin of bacterial toxin-antitoxin system, from PfamA32U |
. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . | |||||||
# | Score | Template | Links and tools | %id | First | YPIAIEIADEQHAYSVVVPDLPGCFSAGDTFDEAVANAREAIEGHLESLSDHGDPIPKTTTIEQHLENPDYKGWVWATVEVDITPYLGKSHKINVTLPELLIKRIDTAVAKQGDVYQSRSGFLSRAA | Last |
1 | -6.950 | sp|Q9NRV9|HEBP1_HUMAN Heme-binding protein 1 OS=Homo sapiens GN=HEBP1 PE=1 SV=1 | ali follow.. | 13 | 18 | WQVLSKGDKEEVAYEEACEGGKFATVTDKPVDEALREAMPKVAKYAGGTNDKGIGMGMTVPISFAVFPNEDGSKVWFRIPNQFQSDPPAPSDKSVKIEGITVYSMQFGGYAKEADYVAQATRLRAAL | 155 |
2 | -6.630 | sp|Q8WX93|PALLD_HUMAN Palladin OS=Homo sapiens GN=PALLD PE=1 SV=3 | ali | 21 | 14 | ....LSDMQEESKNTDFFPGLSAFLSQ-EEINKSLDLARRAIA.................................................................................... | 51 |
3 | -6.590 | sp|Q71RC2|LARP4_HUMAN La-related protein 4 OS=Homo sapiens GN=LARP4 PE=1 SV=3 | ali | 14 | 183 | ................NFPPLPGSSSRMPGELVLENRMSDVVKGVYKEKDNEELTISCPVPADE............................................................... | 230 |
4 | -6.090 | sp|O14880|MGST3_HUMAN(removed signalp:1-25) Microsomal glutathione S-transferase 3 OS=Homo sapiens GN=MGST3 PE=1 SV=1 | ali follow.. | 20 | 1 | ...AINVSKARKKYKVEYPIMYSTDPENNCIQRAHQNTLEVYPPFLFFLAVGGVYHPRIASG................................................................. | 63 |
5 | -6.000 | sp|Q12888|TP53B_HUMAN Tumor suppressor p53-binding protein 1 OS=Homo sapiens GN=TP53BP1 PE=1 SV=2 | ali | 20 | 2 | YSGKITRDVGAGKYKLLFDD........................................................................................................... | 21 |
6 | -5.970 | sp|O43166|SI1L1_HUMAN Signal-induced proliferation-associated 1-like protein 1 OS=Homo sapiens GN=SIPA1L1 PE=1 SV=4 | ali | 16 | 1 | YSVAVTRSRDVPSFGPPIPK-GVTFPKSNVFRDFL-NAENAA--------------------------------------HKSEKFRAMATR---TRQEYLKDLAEKNVTNTPIDPSGKFPFISLAS | 89 |
7 | -5.830 | sp|Q9Y4W2|LAS1L_HUMAN Protein LAS1 homolog OS=Homo sapiens GN=LAS1L PE=1 SV=2 | ali | 12 | 1 | ...........................SPRVECVLAELKGVTEAVLDAFLDDGFLVPTFEQLAALQIEYEDGQTEVQRGEGTDPKSHKNVDLNDVLVPKPFSQFLLRGLHSQNFTQALLERMLSELP | 107 |
8 | -5.800 | sp|Q8WZA1|PMGT1_HUMAN Protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1 OS=Homo sapiens GN=POMGNT1 PE=1 SV=2 | ali | 8 | 25 | WDMWMRMPEQRRGRECIIPDVSRSYHFGIVGLNMNGYFHEAYFKKHKFNTVPGVQLRNVDSLKKEAYEVEVHRLLSEAEVLDHSKNPCEDSFLPDTEGHTYVAFIRMEKDDDFTTWTQLAKCLH... | 148 |
9 | -5.800 | sp|Q9UHW9|S12A6_HUMAN Solute carrier family 12 member 6 OS=Homo sapiens GN=SLC12A6 PE=1 SV=2 | ali | 11 | 189 | .............VGIFFPSVTGIMAGSNRSGD---------------LKDAQKSIPIGTILAILTTSFVYLSNVVLFGACIEGVVLRDKFGDAVKGNLVVGTLSWSTCGAGLQSLTGAPRLLQAIA | 299 |
10 | -5.730 | sp|Q96MT3|PRIC1_HUMAN Prickle-like protein 1 OS=Homo sapiens GN=PRICKLE1 PE=1 SV=2 | ali | 19 | 166 | .......................SSSSSDSEEEGY-----------------GQPIPQPRPQRFAYYTDDLSSPPSALPTPQFGQRTTKSKKKNCIIS............................. | 231 |
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Ye Y, Jaroszewski L, Li W, Godzik A. A segment alignment approach to protein comparison. Bioinformatics. 2003 Apr 12;19(6):742-9. |