current user: public

If you have questions about the server, please let us know.

Query: PF16078.5; H6C9R5_EXODN/72-112; 2-oxoglutarate dehydrogenase N-terminus, from PfamA32U

Results of FFAS03 search in H.sapiens
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40
# Score Template Links and tools%idFirst DSFLSGNAANYIDEMYLAWKQDPSSVHVSWQAYFHNMEEGNLast
1 -15.900sp|Q02218|ODO1_HUMAN 2-oxoglutarate dehydrogenase, mitochondrial OS=Homo sapiens GN=OGDH PE=1 SV=3  ali   48  47EPFLSGTSSNYVEEMYCAWLENPKSVHKSWDIFFRNTNAGA 87
2 -15.500sp|Q9ULD0|OGDHL_HUMAN(removed signalp:1-15) 2-oxoglutarate dehydrogenase-like, mitochondrial OS=Homo sapiens GN=OGDHL PE=2 SV=3  ali   39  26PSSKGGGGSSYMEEMYFAWLENPQSVHKSWDSFFREASEEA 66
3 -5.350sp|Q9Y217|MTMR6_HUMAN Myotubularin-related protein 6 OS=Homo sapiens GN=MTMR6 PE=1 SV=3  ali   15  9.PFLLEDQKKYLNPLYSSESHRFTVLEPNWRNMYHQFDRT. 55
4 -5.290sp|Q96HY7|DHTK1_HUMAN Probable 2-oxoglutarate dehydrogenase E1 component DHKTD1, mitochondrial OS=Homo sapiens GN=DHTKD1 PE=2 SV=2  ali   2..........ASATAAAARRGLGRALPLFWRGYQTERGVYG 32
5 -4.880sp|A7E2V4|K0913_HUMAN Zinc finger SWIM domain-containing protein KIAA0913 OS=Homo sapiens GN=KIAA0913 PE=1 SV=1  ali   12ERFSFEDSDRFEEDSLCSFISEAESLCQNWRGW........ 44
6 -4.860sp|A6NLI3|YX015_HUMAN Putative uncharacterized protein ENSP00000362624 OS=Homo sapiens PE=5 SV=1  ali follow..  13  26EEWVAVSDATEDPSGGTGLPREPALLRGSWRSRFQR..... 61
7 -4.770sp|Q9Y216|MTMR7_HUMAN Myotubularin-related protein 7 OS=Homo sapiens GN=MTMR7 PE=1 SV=3  ali   20  11.AHLWKNRADYLNPLFRADHSQTQGT---WSGMYNRFEKG. 60
8 -4.680sp|Q7Z3U7|MON2_HUMAN Protein MON2 homolog OS=Homo sapiens GN=MON2 PE=1 SV=2  ali   11  222...LTSKNIQCMRTLLNLAHCHGAVLGTSWQLVLATLQ... 256
9 -4.680sp|Q5TH69|BIG3_HUMAN Brefeldin A-inhibited guanine nucleotide-exchange protein 3 OS=Homo sapiens GN=ARFGEF3 PE=1 SV=3  ali   14  85...LHTAHVLCMEAILSVGLEMGSHNPDCWPHVFRVCE... 119
10 -4.470sp|Q14573|ITPR3_HUMAN Inositol 1,4,5-trisphosphate receptor type 3 OS=Homo sapiens GN=ITPR3 PE=1 SV=2  ali   15  109.HLLDGGNTEIQKSFHNLMMSDKKS-----ERFFKVLH... 140

FFAS is supported by the NIH grant R01-GM087218-01
1 4 3 9 1 0   jobs submitted since Jan 1, 2011
Comments and questions to: webmaster

Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Grynberg M, Godzik A. NERD: a DNA processing-related domain present in the anthrax virulence plasmid, pXO1. Trends Biochem Sci. 2004 Mar;29(3):106-10.