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current user: public |
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Query: PF16078.5; H6C9R5_EXODN/72-112; 2-oxoglutarate dehydrogenase N-terminus, from PfamA32U |
. 10 . 20 . 30 . 40 | |||||||
# | Score | Template | Links and tools | %id | First | DSFLSGNAANYIDEMYLAWKQDPSSVHVSWQAYFHNMEEGN | Last |
1 | -15.900 | sp|Q02218|ODO1_HUMAN 2-oxoglutarate dehydrogenase, mitochondrial OS=Homo sapiens GN=OGDH PE=1 SV=3 | ali | 48 | 47 | EPFLSGTSSNYVEEMYCAWLENPKSVHKSWDIFFRNTNAGA | 87 |
2 | -15.500 | sp|Q9ULD0|OGDHL_HUMAN(removed signalp:1-15) 2-oxoglutarate dehydrogenase-like, mitochondrial OS=Homo sapiens GN=OGDHL PE=2 SV=3 | ali | 39 | 26 | PSSKGGGGSSYMEEMYFAWLENPQSVHKSWDSFFREASEEA | 66 |
3 | -5.350 | sp|Q9Y217|MTMR6_HUMAN Myotubularin-related protein 6 OS=Homo sapiens GN=MTMR6 PE=1 SV=3 | ali | 15 | 9 | .PFLLEDQKKYLNPLYSSESHRFTVLEPNWRNMYHQFDRT. | 55 |
4 | -5.290 | sp|Q96HY7|DHTK1_HUMAN Probable 2-oxoglutarate dehydrogenase E1 component DHKTD1, mitochondrial OS=Homo sapiens GN=DHTKD1 PE=2 SV=2 | ali | 9 | 2 | ..........ASATAAAARRGLGRALPLFWRGYQTERGVYG | 32 |
5 | -4.880 | sp|A7E2V4|K0913_HUMAN Zinc finger SWIM domain-containing protein KIAA0913 OS=Homo sapiens GN=KIAA0913 PE=1 SV=1 | ali | 9 | 12 | ERFSFEDSDRFEEDSLCSFISEAESLCQNWRGW........ | 44 |
6 | -4.860 | sp|A6NLI3|YX015_HUMAN Putative uncharacterized protein ENSP00000362624 OS=Homo sapiens PE=5 SV=1 | ali follow.. | 13 | 26 | EEWVAVSDATEDPSGGTGLPREPALLRGSWRSRFQR..... | 61 |
7 | -4.770 | sp|Q9Y216|MTMR7_HUMAN Myotubularin-related protein 7 OS=Homo sapiens GN=MTMR7 PE=1 SV=3 | ali | 20 | 11 | .AHLWKNRADYLNPLFRADHSQTQGT---WSGMYNRFEKG. | 60 |
8 | -4.680 | sp|Q7Z3U7|MON2_HUMAN Protein MON2 homolog OS=Homo sapiens GN=MON2 PE=1 SV=2 | ali | 11 | 222 | ...LTSKNIQCMRTLLNLAHCHGAVLGTSWQLVLATLQ... | 256 |
9 | -4.680 | sp|Q5TH69|BIG3_HUMAN Brefeldin A-inhibited guanine nucleotide-exchange protein 3 OS=Homo sapiens GN=ARFGEF3 PE=1 SV=3 | ali | 14 | 85 | ...LHTAHVLCMEAILSVGLEMGSHNPDCWPHVFRVCE... | 119 |
10 | -4.470 | sp|Q14573|ITPR3_HUMAN Inositol 1,4,5-trisphosphate receptor type 3 OS=Homo sapiens GN=ITPR3 PE=1 SV=2 | ali | 15 | 109 | .HLLDGGNTEIQKSFHNLMMSDKKS-----ERFFKVLH... | 140 |
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Grynberg M, Godzik A. NERD: a DNA processing-related domain present in the anthrax virulence plasmid, pXO1. Trends Biochem Sci. 2004 Mar;29(3):106-10. |