current user: public |
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Query: PF16311.5; H2L5R6_ORYLA/1-133; Transmembrane protein 100, from PfamA32U |
. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 | |||||||
# | Score | Template | Links and tools | %id | First | MPEEVNKDAMRTPSTSDKATNSERPAATATAVNIPLVNEVQLTAATGGAELSCYRCTIPFGVVVLIAGIVVTVVAYSFNSHGSTISYFGLVLLSAGLLLLASSAICWKVKLERKKERRRESQTVLVTNQRSIF | Last |
1 | -90.900 | sp|Q9NV29|TM100_HUMAN Transmembrane protein 100 OS=Homo sapiens GN=TMEM100 PE=2 SV=2 | ali follow.. | 63 | 1 | MTEEPIKEILGAPKAHMAATMEKSPKSEVVITTVPLVSEIQLMAATGGTELSCYRCIIPFAVVVFIAGIVVTAVAYSFNSHGSIISIFGLVVLSSGLFLLASSALCWKVRQRSKKAKRRESQTALVANQRSLF | 133 |
2 | -11.200 | sp|P0C851|PIRT_HUMAN Phosphoinositide-interacting protein OS=Homo sapiens GN=PIRT PE=2 SV=2 | ali follow.. | 18 | 1 | MTMETLPKVLEVDEKSPEAKDLLPSQTASSLCISSRSESVWTTTPRSNWEIYRKPIIMSVGGAILLFGVVITCLAYTLKLSDKSLSILKMVFLSLGLMMLVCGLVWVPIIKKKQKHRQKSN---FLRSLKSFF | 134 |
3 | -10.200 | sp|Q8WVE6|TM171_HUMAN Transmembrane protein 171 OS=Homo sapiens GN=TMEM171 PE=2 SV=3 | ali follow.. | 14 | 2 | .................................SPAAAAEPDGDQQDRHVSKLIFCFFVFGAVLLCVGVLLSIFGFPLPDCPMVLKVAGPACAVVGLGILARSRAQLQLRAGLQRGQQMDPDRAFICGESRQF | 109 |
4 | -9.870 | sp|Q9H7V2|TM90B_HUMAN Transmembrane protein 90B OS=Homo sapiens GN=TMEM90B PE=2 SV=1 | ali follow.. | 7 | 153 | ............EEEFQELESDYSSDTESEDNFLMMPPRDHLGLSV----FSMLCCFWPLGIAAFYLSHETNKAVAKGDTSSRRALFLAVLSITIGTGVYVGVAVALIAYLSKNNH................. | 257 |
5 | -9.810 | sp|Q8IZ57|NRSN1_HUMAN Neurensin-1 OS=Homo sapiens GN=NRSN1 PE=2 SV=1 | ali follow.. | 20 | 46 | .....................................DDFQIQRSPNRWSSVFWKVGLISGTVFVILGLTVLAVGFLFNSALDMYKLAGAVLFCIGGTSMAGCLLMSVFVKSYSKEEKFLQQKF......... | 154 |
6 | -9.610 | sp|Q9NX00|TM160_HUMAN(removed signalp:1-22) Transmembrane protein 160 OS=Homo sapiens GN=TMEM160 PE=2 SV=1 | ali follow.. | 12 | 10 | ..........GARGSFAPGHGPRAGASPPPVSELDRADAWLLRKAHETAFLSWFR-----GLLASGIGVISFMQSDMGREAAYGFFLLGGLCVVWGSASYAVGLAALR......................... | 103 |
7 | -9.480 | sp|Q8IXB3|TUSC5_HUMAN Tumor suppressor candidate 5 OS=Homo sapiens GN=TUSC5 PE=2 SV=2 | ali follow.. | 14 | 111 | ...................................................ACFCPVWPLNLIPLIISIMSRSSMQQGNRLGRLARLLSITLIIMGIVIIMVAVTVNFTVQKK.................... | 177 |
8 | -9.200 | sp|Q6ZNR0|TMM91_HUMAN Transmembrane protein 91 OS=Homo sapiens GN=TMEM91 PE=2 SV=1 | ali follow.. | 12 | 67 | ............PDVEDMSSSDSDSDWDGGSRLSPFLPHDHLGLAV----FSMLCCFWPVGIAAFCLAQKTNKAWAKGDAASRRAFLLGVLAVGLGVCTYAAALVTLAAYLASR................... | 169 |
9 | -8.990 | sp|B4DJY2|TM233_HUMAN Transmembrane protein 233 OS=Homo sapiens GN=TMEM233 PE=3 SV=1 | ali follow.. | 20 | 44 | ...................................................SCFCPAYPINIVALVFSIMSLNSYNDGDRLGRNAKWVAIASIIIGLLIIGISCA............................ | 102 |
10 | -8.960 | sp|Q01629|IFM2_HUMAN Interferon-induced transmembrane protein 2 OS=Homo sapiens GN=IFITM2 PE=1 SV=2 | ali follow.. | 10 | 64 | ...................................................TLFMNTCCLGFIAFAYSVKSRDRKMVGDAYASTAKCLNIWALILGIFMTILLIIIPVLVVQAQR.................. | 132 |
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Pawlowski K, Pio F, Chu Z, Reed JC, Godzik A. PAAD - a new protein domain associated with apoptosis, cancer and autoimmune diseases. Trends Biochem Sci. 2001 Feb;26(2):85-7. |