current user: public

If you have questions about the server, please let us know.

Query: PF16998.5; B9JAN2_AGRRK/36-151; 17 kDa outer membrane surface antigen, from PfamA32U

Results of FFAS03 search in H.sapiens
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .
# Score Template Links and tools%idFirst SGGMDILSSAKVDRSVATGTIPTAPVTADSVSDETTVRNAVTSADLHKLNGQPVPWANASTGSAGVIDTIVENSASGQVCRQFRTTRHSYQGIANFSGRTCLLGQGEWQLLSFQQALast
1 -8.310sp|Q96FE7|P3IP1_HUMAN(removed signalp:1-21) Phosphoinositide-3-kinase-interacting protein 1 OS=Homo sapiens GN=PIK3IP1 PE=1 SV=2  ali follow..  11  5.......................................................FWDNGHLYREDQ----TSPAPGLRCLNWLDAQASAPVSGAGNHSYCRNPDEDW........ 60
2 -8.250sp|Q9H6K5|YS027_HUMAN Putative uncharacterized protein FLJ22184 OS=Homo sapiens PE=1 SV=1  ali   20  125.......................................................WAEPLDESRASITSVTSFSPDD-----------------------VASPQGDWTVVEVE.. 163
3 -8.130sp|Q8WWA0|ITLN1_HUMAN(removed signalp:1-16) Intelectin-1 OS=Homo sapiens GN=ITLN1 PE=1 SV=1  ali follow..  17  1.......................................................WSTDEANTYFKEWTCSSSPSLPRSCKEIKDE-----CPSAFDGTFCTSGGGGWTLVA.... 67
4 -7.980sp|P08962|CD63_HUMAN(removed signalp:1-27) CD63 antigen OS=Homo sapiens GN=CD63 PE=1 SV=2  ali follow..  72AAAIAGYVFRDKVMSEFNNNFRQQMENYPKNNHTASILDRMQADFKCCGAANYTDWEKIPSMSKNRVPDS---------CINVTVGCGINFNEKAIHKEGCVEKIGGW........ 171
5 -7.810sp|Q01974|ROR2_HUMAN(removed signalp:1-33) Tyrosine-protein kinase transmembrane receptor ROR2 OS=Homo sapiens GN=ROR2 PE=1 SV=2  ali   13  134.......................................................YNGSGMDYRGTA----STTKSGHQCQPWALQHPHSHHLSSTD-AYCRNPGGQW........ 193
6 -7.600sp|Q01973|ROR1_HUMAN(removed signalp:1-29) Tyrosine-protein kinase transmembrane receptor ROR1 OS=Homo sapiens GN=ROR1 PE=2 SV=2  ali   11  135.......................................................YNSTGVDYRGTV----SVTKSGRQCQPWNSQYPHTHTFTALR-SYCRNPGNQW........ 194
7 -7.010sp|O43150|ASAP2_HUMAN Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 2 OS=Homo sapiens GN=ASAP2 PE=1 SV=3  ali   199....................LNLLTCQVKTNPEEKKCFDLISHHFQAEDEQECQIWMSVLQNSKEEALNNAFKGDGNDVCCD------------------CGAPDPTWLSTN.... 300
8 -6.770sp|P98088|MUC5A_HUMAN(removed signalp:1-27) Mucin-5AC (Fragments) OS=Homo sapiens GN=MUC5AC PE=1 SV=3  ali   13  1.GTATSVKKTFSTPSPPPVPATSTSSMSTTAPGTSVVSSKPTPTEPSTSSCLQTEWIDGSYPAGGDFDTFQNLRDEGYQCRAESFPNTPLADLGQDEGLICLNKN-NYEIR..... 140
9 -6.700sp|Q6ZRP7|QSOX2_HUMAN Sulfhydryl oxidase 2 OS=Homo sapiens GN=QSOX2 PE=1 SV=3  ali   11  225..............EMLQEWLASLPLDRIPYNAVLDLVNNKMRI-SGIFLTNHIKWVG---------------------CQ---------GSRSELRGYPC----SLWKLFHTLTV 291
10 -6.620sp|P22891|PROZ_HUMAN(removed signalp:1-22) Vitamin K-dependent protein Z OS=Homo sapiens GN=PROZ PE=1 SV=2  ali follow..  17  263.....................................KDFAEHLLIPRTRGLLSGWARNGTDLGNSLTTRPVTLVEGEECGQLNVTVTTRTYCERSSVAAMHWMDGSWFLTGV... 348

FFAS is supported by the NIH grant R01-GM087218-01
1 4 6 1 3 9   jobs submitted since Jan 1, 2011
Comments and questions to: webmaster

Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Pawlowski K, Jaroszewski L, Bierzynski A, Godzik A. Multiple model approach--dealing with alignment ambiguities in protein modeling. Pac Symp Biocomput. 1997;:328-39.