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current user: public |
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Query: PF17319.2; D1ARU2_SEBTE/23-116; Family of unknown function (DUF5362 topsan), from PfamA32U |
. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 | |||||||
# | Score | Template | Links and tools | %id | First | LKFIGLVQQIMGVLTIISGAIMCLTIIGAAAGVPYIIGALNIFKSGGAFGDTSRNESGESLREAIAGLAKGMKLMLIGFVIWIVLYILLMVVIM | Last |
1 | -12.000 | sp|Q96JQ2|CLMN_HUMAN Calmin OS=Homo sapiens GN=CLMN PE=1 SV=1 | ali | 16 | 197 | ...........................................RKANSSGEAMSLGSHSPQSDSLTQLVQQPDMMYFILFLWLLVYCLLLF... | 244 |
2 | -10.200 | sp|P11836|CD20_HUMAN B-lymphocyte antigen CD20 OS=Homo sapiens GN=MS4A1 PE=1 SV=1 | ali follow.. | 20 | 50 | .KTLGAVQIMNGLFHIALGGLLMIPAICVTVWYPLWGGIM--YIISGSLLAATEKNSRKCL------VKGKMIMNSLSLFAAISGMILSIMDIL | 139 |
3 | -9.360 | sp|Q96PG2|M4A10_HUMAN Membrane-spanning 4-domains subfamily A member 10 OS=Homo sapiens GN=MS4A10 PE=2 SV=3 | ali follow.. | 14 | 57 | LKELGAFHITIALLHLVFGGYLASIVVVLKSWYPF--GAASFLISGILAITMKTFSKTYLKMLCLMTNLISLFCVLSGLFVISK.......... | 144 |
4 | -9.180 | sp|Q96JQ5|M4A4A_HUMAN Membrane-spanning 4-domains subfamily A member 4A OS=Homo sapiens GN=MS4A4A PE=2 SV=1 | ali follow.. | 18 | 64 | .KVLGVVQILTALMSLSMGITMMCMPISVYIGYTI--GSVMFIISGSLSIAAGIRTTKGLVRGSLGMNITSSVLAASGILINTF.......... | 153 |
5 | -8.720 | sp|Q9H2W1|M4A6A_HUMAN Membrane-spanning 4-domains subfamily A member 6A OS=Homo sapiens GN=MS4A6A PE=2 SV=1 | ali follow.. | 21 | 45 | IKVIGTIQILCGMMVLSLGIILASASTLLNSAYPF--GPFFFIISGSLSIATEKRLTKLLVHSSLVGSILSALSALVGFIILSV.......... | 137 |
6 | -8.680 | sp|Q01362|FCERB_HUMAN High affinity immunoglobulin epsilon receptor subunit beta OS=Homo sapiens GN=MS4A2 PE=2 SV=1 | ali follow.. | 20 | 58 | QEFLGVTQILTAMICLCFGTVVCSVLSSFKAGYPF--GAIFFSISGMLSIISERRNATYLVRGSLGANTASSIAGGTGITILII.......... | 150 |
7 | -8.470 | sp|Q3C1V0|M4A18_HUMAN Membrane-spanning 4-domains subfamily A member 18 OS=Homo sapiens GN=MS4A18 PE=2 SV=2 | ali follow.. | 19 | 154 | .RTLGAIQILIGLTHIFSAINPVLYFVTWLSGYPL--GGLSYIVSGSLSVWAAKDPSPCVVNSSISFNIISALFAFAGIFIILLPFALLEFIL. | 266 |
8 | -8.460 | sp|Q3YBM2|T176B_HUMAN Transmembrane protein 176B OS=Homo sapiens GN=TMEM176B PE=2 SV=2 | ali follow.. | 18 | 65 | .LALGVTQILLGVVSCVLGVCLSLGPWTVLSGCAFWAGSV--VIAAGAGAIVHEKHPGKLA------GYISSLLTLAGFATAMAAVVLCVNSFI | 151 |
9 | -8.270 | sp|Q96JA4|M4A14_HUMAN Membrane-spanning 4-domains subfamily A member 14 OS=Homo sapiens GN=MS4A14 PE=2 SV=2 | ali | 14 | 43 | .RVLGATQILLALIIVGFGTIFALNYLVVLTGYPFWGALI--FILTGYLTVTDKKSKLLGQGVTGMNVISSL-VAITGITFTIL.......... | 130 |
10 | -8.250 | sp|Q9NXJ0|M4A12_HUMAN Membrane-spanning 4-domains subfamily A member 12 OS=Homo sapiens GN=MS4A12 PE=2 SV=2 | ali follow.. | 24 | 89 | .KALGVIQIMVGLMHIGFGIVLCLISTAVIGGYPF--GGLSFIISGSLSVSASKELSRCLVKGSLGMNIVSSILAFIGVILLLV.......... | 181 |
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Pawlowski K, Pio F, Chu Z, Reed JC, Godzik A. PAAD - a new protein domain associated with apoptosis, cancer and autoimmune diseases. Trends Biochem Sci. 2001 Feb;26(2):85-7. |