current user: public |
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Query: PF02826.19; Q98GE4_RHILO/107-283; D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain, from PfamA32U |
. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 . 170 . | |||||||
# | Score | Template | Links and tools | %id | First | MFTALALLRQFRRVDRDLRAKGWLAGREHANANIELAGKTIGIVGLGAVGQAVGHIAAHGFDLKVVATTRSMQPAPEKVGFLSIDALVEQSDIIVLCCPLTPETRGLISRERIARMKPNALLINVSRGPVVDDDALIEALREGRIGGAALDVFSTQPLSYNHPYFGFDNVIITPHMA | Last |
1 | -3.490 | PB033130 gi|160880323|ref|YP_001559291.1| transglutaminase domain protein [Clostridium phytofermentans ISDg]gi|160428989|gb|ABX42552.1| transglutaminase domain protein [Clostridium phytofermentans ISDg] | ali follow.. | 9 | 2 | ..........VCGAKVSLEILNYAEFASVTELYTDEKGCVSITIGLGDIHIRAVKDGFFAEAM-TLILNDNLLSKDWVTDSWEMCEVEAPKDSVKYQFNLTREQQSYYDEALAENVPDAKEILHLAKGRFLTVDGLLKTLKVKDYKDVTASVLEDH..................... | 191 |
2 | -2.670 | HGC00933 gi|162753228|dbj|BAAZ01012194.1|2.0 TMP01261; | ali follow.. | 13 | 112 | .................................................................................QSIEKSLVSKNPLVRILALLDRR---LGKRRLLALEES----------MEQELDWVRAFYVIRMQAEGLMEKE....................... | 171 |
3 | -2.380 | PB000119 Q6KIT1_MYCMO/1-381 PB000119; Pfam-B_119; | ali follow.. | 9 | 227 | ..............................................................VRINTIRPNPNPNPNEIFNFDLNNLPIENGLLTVEAIWFLQSKMELTDTATVIIINNTAYVNINKNSVKHNNFAVNYLKSEELLGLFVEKFFKDDVEVFSPKIPALYFVVN.... | 348 |
4 | -2.230 | PB155142 _HOMD.0127537_ bfor_c_1_1790 Tannerella forsythia ATCC 43037 [677748 - 680894] ORF | ali follow.. | 16 | 12 | .......................................................................................INPEDIESQTILKDAAATALYGSRG----ANGVVLITTKSG................................................. | 48 |
5 | -2.210 | HGC00166 gi|163579340|dbj|BABE01005762.1|1.0 TMP00473; | ali follow.. | 7 | 123 | .......................................................................................INRIPTRKHNILLTTPARTLLDCAVFPFPQALPIYDSALRKSLTTIEEVQSLMIQSV-EVSVTKLLKYANPLSENGGESLMRGQI..... | 209 |
6 | -1.880 | HGC00106 gi|162841414|dbj|BABA01003295.1|1.0 TMP01000; | ali follow.. | 12 | 1 | .......................................................................................LEDGDFVKLSNLTIGYTLPIRNNKYMKSLRVYVSGNNL---CITGYSGLDPELDISNVQAPGVEYRDTYPTTRSFTF............. | 75 |
7 | -1.710 | PB202086 Q8G498_BIFLO/2-200 PB202086; Pfam-B_202086; | ali follow.. | 15 | 146 | ..................................................................................WYETHEKSLSKAVRAVVESKAAKRLDDAKT-AKLDEASKLLADSDGKVADNA........................................... | 199 |
8 | -1.690 | PB083081 gi|160890648|ref|ZP_02071651.1| hypothetical protein BACUNI_03093 [Bacteroides uniformis ATCC 8492]gi|156859647|gb|EDO53078.1| hypothetical protein BACUNI_03093 [Bacteroides uniformis ATCC 8492] | ali follow.. | 15 | 1 | ...................................................................................................................MKKTIFYSLFSALFMLTSCSMFEI-PSETIWGEVVDEATGKRVLTD................ | 50 |
9 | -1.590 | PB015954 Q6WBB3_BIFBR/1-225 PB015954; Pfam-B_15954; | ali follow.. | 8 | 120 | .............................................VGYRADDSYFSFARTFVNNAISLD-------------QLADAMRLGELGKQIVLISSRAFAALQFQDCEIARASTYHVLRNERDVTAREAYRRKSAEADIDGLFMRDIIREKVTNDDP.............. | 224 |
10 | -1.590 | PB003645 Q65HI2_BACLD/1-230 PB003645; Pfam-B_3645; | ali follow.. | 10 | 105 | ..................................QLKDILETIIGVEDVSIVVNATSLKIFEKNRKTQETSTNETDKQGGKRTVSEMSSDEEIVIIK---GDKETPVVVQTKKPDIRGVLVVAQGVDNVQI-KKTIIEAVTR-DVPSHRVAVAPKK..................... | 226 |
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Zmasek CM, Zhang Q, Ye Y, Godzik A. Surprising complexity of the ancestral apoptosis network. Genome Biol. 2007 Oct 24;8(10):R226 [Epub ahead of print] |