Scheduled maintenance will begin on May 30th, 2025. Server will be temporarily unavailable — learn more.
current user: public
If you have questions about the server, please let us know.

Query: PF03519.14; W0HTY6_9GAMM/17-94; Invasion protein B family, from PfamA32U

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .
# Score Template Links and tools%idFirst GCDPSLLGNFDSHSTIALDFNDMPSIYISSSDDDIWLWSRIAEYQDTILEQCSYNLLKELLEGAEYIRGGHFSLAENELast
1 -4.290PB007011 gi|160888195|ref|ZP_02069198.1| hypothetical protein BACUNI_00603 [Bacteroides uniformis ATCC 8492]gi|156862330|gb|EDO55761.1| hypothetical protein BACUNI_00603 [Bacteroides uniformis ATCC 8492]  ali follow..  8  110.....AVFDKDEHPARKDAFEEAKKVNIAFSSRSFEYY-LLLHFEYLYHPFHATECGERIDGKKV............. 174
2 -4.120PB177066 Q891G9_CLOTE/1-159 PB177066; Pfam-B_177066;  ali follow..  9  3................VLSLKEVKLLMNDTQKNDLFYVCCLIEFIGRKTKNRRSIIVQKL.................. 46
3 -2.170HGC00947 gi|162844524|dbj|BABA01000185.1|4.0 TMP01280;  ali follow..  9  23SCSEEEDCSMNARPMMQCYLYKIDGETERVVNDTLDSLTITAFGTDSIILNNQKRVHGLSLP................ 84
4 -2.170HGC01213 gi|163579070|dbj|BABE01006032.1|2.0 TMP01709;  ali follow..  8  129GGSLDFTATIVHEGSGNYLVDSGRVLTITSGQETIYKSDVCPADSRLLLMAKGDKDVQKVT................. 192
5 -2.050PB062605 Q9F6T7_BACTN/1-105 PB062605; Pfam-B_62605;  ali follow..  0  63....RAAYDIGRNDGSRMETGHAGRVELPTPAETD........................................... 93
6 -1.990PB078508 A6TV41_9CLOT/1-155 PB078508; Pfam-B_78508;  ali follow..  44  147........NAKEHSEIE............................................................. 155
7 -1.970PB002776 gi|157737147|ref|YP_001489830.1| hypothetical protein Abu_0901 [Arcobacter butzleri RM4018]gi|157699001|gb|ABV67161.1| hypothetical protein Abu_0901 [Arcobacter butzleri RM4018]  ali follow..  2  166............EVIEQFTYPKYYIASFLKESYNSSVWGHYGQGHSGVC............................. 202
8 -1.920PB014120 _Gut.Meta.Jp.0147711_ gi|163636126|dbj|BABG01000147.1||5 (+ 2345:3428~0 complete)  ali follow..  12  247........DIKNFSNIDYDVDFIKCFLRDSIQQEVPYDPVEQKDFDKKILGKSQNRFVLAFNKFTIPDDKVFEIEMFE 322
9 -1.740PB001708 Q3IRP6_NATPD/1-505 PB001708; Pfam-B_1708;  ali follow..  11  4GIPEQLIRRLSDASRLVP-------ALLAVVAAVIYVWRPLFHYSPSLLILVGTTVVAGIA................. 65
10 -1.660PB021133 Q64YN4_BACFR/1-310 PB021133; Pfam-B_21133;  ali follow..  10  17GSSRQLANYLEHEDLERMEKGLYTDSFFNLTENNIYKSKVIKDIDSNILLKTDAKFYAIHVSPSE............. 83
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 0 6 6   jobs submitted since Jan 1, 2011
Comments and questions to: webmaster
Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Pawlowski K, Pio F, Chu Z, Reed JC, Godzik A. PAAD - a new protein domain associated with apoptosis, cancer and autoimmune diseases. Trends Biochem Sci. 2001 Feb;26(2):85-7.