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current user: public |
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Query: PF04210.13; Q12VV0_METBU/7-70; Tetrahydromethanopterin S-methyltransferase, subunit G, from PfamA32U |
. 10 . 20 . 30 . 40 . 50 . 60 | |||||||
# | Score | Template | Links and tools | %id | First | TTPSVVTDPVDFNEVLEKLNLIDEKIEFVNSEIAQRIGKKLGRDIGIMYGAVAGILIFLIYISL | Last |
1 | -4.840 | PB000716 Q60CS7_METCA/1-294 PB000716; Pfam-B_716; | ali follow.. | 15 | 249 | TLPEDIPAAEHIKEVEKRLKSATPRLTLDERDAGGLTGGKPDKN.................... | 292 |
2 | -3.290 | PB000790 _Gut.Meta.Jp.0111831_ gi|163310496|dbj|BABD01000203.1||3 (- 2591:4589~0 complete) | ali follow.. | 20 | 232 | .......................WESYFLLAEAAEY-GWISNITPKEAYGIRSSFEYF...... | 267 |
3 | -3.140 | HGC00579 gi|163284429|dbj|BABD01026259.1|2.0 TMP00679; | ali follow.. | 13 | 125 | .......TSYQYVNETSRMLLVKVTYGMDFGRKRKTAAKRIQNDTGILKG.............. | 170 |
4 | -2.820 | PB002104 Q72PH8_LEPIC/1-220 PB002104; Pfam-B_2104; | ali follow.. | 8 | 1 | ..................MHNFKEKIQFSKIRSRSCPFMQQNKFRKAIVAILMPMILVVSFGN. | 45 |
5 | -2.780 | PB044822 Q89ZL7_BACTN/1-147 PB044822; Pfam-B_44822; | ali follow.. | 21 | 100 | ..PYSFVLVDEDKETVAELLLIDDDTLLVDDELLKGLDKELDEFLKNLL............... | 146 |
6 | -2.770 | PB006154 _JGI.0331794_ 2004021056 [Human Gut Community Subject 7] | ali follow.. | 15 | 5 | .............SVPRDLTKVKSKV-----------NLTKRQLICFGMAVLIGVPSFFLM... | 43 |
7 | -2.600 | HGC00803 gi|163280588|dbj|BABD01030100.1|2.0 TMP01051; | ali follow.. | 20 | 61 | ...........LDEAVCGINDLQEEFDENDSEIETVARDCIGVTVAYIFGIPIDI......... | 107 |
8 | -2.550 | PB030138 Q7MX14_PORGI/1-113 PB030138; Pfam-B_30138; | ali follow.. | 12 | 11 | .......KPRSFDHKPIYYDQRRDELEKRIERIRREVEQE........................ | 43 |
9 | -2.180 | PB006791 A6TXD6_9CLOT/1-181 PB006791; Pfam-B_6791; | ali follow.. | 12 | 79 | .........KRLDIINNRMSFCIQKVGMVRYNAFADMGSDLSYSYALLDENNNGMII....... | 126 |
10 | -2.130 | PB062605 Q9F6T7_BACTN/1-105 PB062605; Pfam-B_62605; | ali follow.. | 10 | 2 | ........KRKVKSIRKTMWGVYWKLHDKRKRLVERLKGYLDG-VLGMLAAFAVLALYTFGRAA | 65 |
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Ye Y, Jaroszewski L, Li W, Godzik A. A segment alignment approach to protein comparison. Bioinformatics. 2003 Apr 12;19(6):742-9. |