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current user: public |
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Query: PF08793.10; Q0E553_SFAVA/142-176; 2-cysteine adaptor domain, from PfamA32U |
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# | Score | Template | Links and tools | %id | First | YCTNFHRDESRNPLTGKKLVPTSPIRKAWHKMCSG | Last |
1 | -1.200 | PB007843 JCVI_PEP_1096682172521 /source_dna_id=JCVI_ORF_1096682172520 /offset=0 /translation_table=11 /length=152 /full_length=152 | ali follow.. | 20 | 92 | ........FDVFQDYDEERVYPSDIKKQWYNI... | 117 |
2 | -1.050 | HGC00593 gi|162858151|dbj|BABB01011554.1|1.0 TMP00709; | ali follow.. | 17 | 19 | .....NRIDVPDDGFSRRVMRRLPISRLWTAVCV. | 52 |
3 | -0.896 | PB001030 Q6D4H5_ERWCT/1-146 PB001030; Pfam-B_1030; | ali follow.. | 21 | 69 | HCYQPARREAIKAISGPRMLLRHPILAIRHLI... | 103 |
4 | -0.866 | HGC00311 gi|163635536|dbj|BABG01000737.1|2.0 TMP00178; | ali follow.. | 15 | 3 | ......KPKNLEQLRAEKEQVETQLAQEQHKL... | 28 |
5 | -0.609 | PB047496 gi|150008556|ref|YP_001303299.1| hypothetical protein BDI_1942 [Parabacteroides distasonis ATCC 8503]gi|149936980|gb|ABR43677.1| conserved hypothetical protein [Parabacteroides distasonis ATCC 8503] | ali follow.. | 21 | 36 | .......KNAVTSVTGGKAVTFENLQGTWM..... | 58 |
6 | -0.587 | PB092941 Q45777_BACTN/1-139 PB092941; Pfam-B_92941; | ali follow.. | 16 | 114 | ...DFNMADRMNELLRQGTHIYRRIKRG....... | 138 |
7 | -0.563 | PB004996 Q5NNS6_ZYMMO/1-150 PB004996; Pfam-B_4996; | ali follow.. | 20 | 57 | ......NDGKQTPCKGHPVFLAQHATGTWHRIEAG | 93 |
8 | -0.484 | PB006154 _JGI.0331794_ 2004021056 [Human Gut Community Subject 7] | ali follow.. | 21 | 14 | ......KSKVMFNLTKRQLI............... | 27 |
9 | -0.448 | HGC00928 gi|162868028|dbj|BABB01001979.1|3.0 TMP01255; | ali follow.. | 25 | 183 | ...................IHQSGMLYDWHNYWNG | 198 |
10 | -0.436 | HGC00690 gi|162868815|dbj|BABB01001192.1|3.0 TMP00870; | ali follow.. | 17 | 106 | .CIAVALAEILHPIIYKRMKLRAGLGIIVISMAIG | 141 |
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Jaroszewski L, Rychlewski L, Zhang B, Godzik A. Fold prediction by a hierarchy of sequence, threading, and modeling methods. Protein Sci. 1998 Jun;7(6):1431-40. |