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Query: PF10177.9; W5KY66_ASTMX/13-159; Uncharacterised conserved protein (DUF2371 topsan), from PfamA32U

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst RQDSLRTKNRAENKRRRKARKKRKNDIVVVKGKLNLCSVSGMAAAFGVLVLMVGIAMAVLGYWPRENLAHTVSLQRVNDATINSTKPIPPASRHVGFFEDFFSNYQYSDNLKVFGPLVMGIGIFLFICANAVLHENRDKKTKIINLRLast
1 -5.980PB023890 Q7MUU3_PORGI/1-263 PB023890; Pfam-B_23890;  ali follow..  14  1.................................................................................................................MDPPVCSFGCYLLLFACPIIFMKKEFIGRTAKSL 41
2 -5.580HGC00672 gi|162843654|dbj|BABA01001055.1|4.0 TMP00845;  ali follow..  1.....................................................................................................MAHRLNTNKQFMVGNGILAFAVIFVVVIFVYMSMRLQQQKA..... 41
3 -4.890PB053244 _HOMD.0087087_ pint_c_2_2642 Prevotella intermedia 17 [158005 - 157583] (REVERSE SENSE) ORF  ali follow..  14  6..............................................................................................IGGLLMAVGTGLYAFFIIQVACIVMLIGAICFATMQMRQYLGTNLTIRRL... 57
4 -4.360PB003645 Q65HI2_BACLD/1-230 PB003645; Pfam-B_3645;  ali follow..  69SESTVQSGEGEKEVFKPASDDKPKESIQDYEQEYENQLKDILETIIGVEDVSIVVNVDATSLKIFEKNRKTQETSTNETDKQGGKRTVSEMSSDEEIVIIKNGDKETPVVVQTKKPDIRGV---LVVAAVTRVLDVPSHRVAVAPKK 226
5 -3.250PB038151 Q8A4A5_BACTN/1-178 PB038151; Pfam-B_38151;  ali follow..  16  18.....................................................................................................IAKRTSISGL-LISCVMLLIGILSF--ASTFELEDKSSTVSMALM. 59
6 -2.870PB015879 Q5LJ14_BACFN/120-411 PB015879; Pfam-B_15879;  ali follow..  15  76.........................................................................................................YHVDDCYKVGP-TLGGGTTALMAGDTIVYPYCYATQEIL... 118
7 -2.860PB027498 Q7MTK6_PORGI/1-146 PB027498; Pfam-B_27498;  ali follow..  18  6..............................................................................................................ILIIGVLVLGLVAALTEIRHSHKRRAAEAKGE..... 37
8 -2.760PB000119 Q6KIT1_MYCMO/1-381 PB000119; Pfam-B_119;  ali follow..  13  228RINTIRPN---PNPNPNEIFNFDLNNLPIENGLLTVEAIWFLQSKMELTDTATVIIINNTAYVNINKNSVKHNNFAVNYLKSEENNWYLTGRD----LLGLFVEKFFKDDVEVFSPKIPAL--FVVIFSSVGISSLSTNNPKLI... 371
9 -2.650HGC00522 gi|163636101|dbj|BABG01000172.1|3.0 TMP00580;  ali follow..  12  3.............................................................................TNYKRQRMNIFDIAKQNQEKAWQVIKNTNIIQIWEDAGAKINLVGSLRT-----LLMKHRDIDFHIY... 65
10 -2.640HGC00711 gi|162743779|dbj|BAAZ01020484.1|1.0 TMP00907;  ali follow..  12  2..RGRIVRLRGARAPLGRGRGAASGALSDERGAGTVLVVGVIAVLLAAALGVSGLIQAQAAAGRSRAAADLAALGGATALSSIVAPGDPCEAA---------SRVARANGAEVTTCSVTGEDVVVEVSVEARV.............. 123

FFAS is supported by the NIH grant R01-GM087218-01
1 4 7 6 2 8   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Friedberg I, Godzik A. Fragnostic: walking through protein structure space. Nucleic Acids Res. 2005 Jul 1;33(Web Server issue):W249-51.