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current user: public |
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Query: PF10177.9; W5KY66_ASTMX/13-159; Uncharacterised conserved protein (DUF2371 topsan), from PfamA32U |
. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . | |||||||
# | Score | Template | Links and tools | %id | First | RQDSLRTKNRAENKRRRKARKKRKNDIVVVKGKLNLCSVSGMAAAFGVLVLMVGIAMAVLGYWPRENLAHTVSLQRVNDATINSTKPIPPASRHVGFFEDFFSNYQYSDNLKVFGPLVMGIGIFLFICANAVLHENRDKKTKIINLR | Last |
1 | -5.980 | PB023890 Q7MUU3_PORGI/1-263 PB023890; Pfam-B_23890; | ali follow.. | 14 | 1 | .................................................................................................................MDPPVCSFGCYLLLFACPIIFMKKEFIGRTAKSL | 41 |
2 | -5.580 | HGC00672 gi|162843654|dbj|BABA01001055.1|4.0 TMP00845; | ali follow.. | 2 | 1 | .....................................................................................................MAHRLNTNKQFMVGNGILAFAVIFVVVIFVYMSMRLQQQKA..... | 41 |
3 | -4.890 | PB053244 _HOMD.0087087_ pint_c_2_2642 Prevotella intermedia 17 [158005 - 157583] (REVERSE SENSE) ORF | ali follow.. | 14 | 6 | ..............................................................................................IGGLLMAVGTGLYAFFIIQVACIVMLIGAICFATMQMRQYLGTNLTIRRL... | 57 |
4 | -4.360 | PB003645 Q65HI2_BACLD/1-230 PB003645; Pfam-B_3645; | ali follow.. | 8 | 69 | SESTVQSGEGEKEVFKPASDDKPKESIQDYEQEYENQLKDILETIIGVEDVSIVVNVDATSLKIFEKNRKTQETSTNETDKQGGKRTVSEMSSDEEIVIIKNGDKETPVVVQTKKPDIRGV---LVVAAVTRVLDVPSHRVAVAPKK | 226 |
5 | -3.250 | PB038151 Q8A4A5_BACTN/1-178 PB038151; Pfam-B_38151; | ali follow.. | 16 | 18 | .....................................................................................................IAKRTSISGL-LISCVMLLIGILSF--ASTFELEDKSSTVSMALM. | 59 |
6 | -2.870 | PB015879 Q5LJ14_BACFN/120-411 PB015879; Pfam-B_15879; | ali follow.. | 15 | 76 | .........................................................................................................YHVDDCYKVGP-TLGGGTTALMAGDTIVYPYCYATQEIL... | 118 |
7 | -2.860 | PB027498 Q7MTK6_PORGI/1-146 PB027498; Pfam-B_27498; | ali follow.. | 18 | 6 | ..............................................................................................................ILIIGVLVLGLVAALTEIRHSHKRRAAEAKGE..... | 37 |
8 | -2.760 | PB000119 Q6KIT1_MYCMO/1-381 PB000119; Pfam-B_119; | ali follow.. | 13 | 228 | RINTIRPN---PNPNPNEIFNFDLNNLPIENGLLTVEAIWFLQSKMELTDTATVIIINNTAYVNINKNSVKHNNFAVNYLKSEENNWYLTGRD----LLGLFVEKFFKDDVEVFSPKIPAL--FVVIFSSVGISSLSTNNPKLI... | 371 |
9 | -2.650 | HGC00522 gi|163636101|dbj|BABG01000172.1|3.0 TMP00580; | ali follow.. | 12 | 3 | .............................................................................TNYKRQRMNIFDIAKQNQEKAWQVIKNTNIIQIWEDAGAKINLVGSLRT-----LLMKHRDIDFHIY... | 65 |
10 | -2.640 | HGC00711 gi|162743779|dbj|BAAZ01020484.1|1.0 TMP00907; | ali follow.. | 12 | 2 | ..RGRIVRLRGARAPLGRGRGAASGALSDERGAGTVLVVGVIAVLLAAALGVSGLIQAQAAAGRSRAAADLAALGGATALSSIVAPGDPCEAA---------SRVARANGAEVTTCSVTGEDVVVEVSVEARV.............. | 123 |
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Friedberg I, Godzik A. Fragnostic: walking through protein structure space. Nucleic Acids Res. 2005 Jul 1;33(Web Server issue):W249-51. |