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current user: public |
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| Query: PF10752.9; D3FXJ5_BACPE/1-83; Protein of unknown function (DUF2533 topsan), from PfamA32U |
| . 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 | |||||||
| # | Score | Template | Links and tools | %id | First | MSVHLQIAEQVTNHRRAQKEFLALDEKREAAIDRVVEDAKKGLHISLNEVNAITKEMNQIAQDFYFPPRKEVTTDMVREYINK | Last |
| 1 | -4.740 | PB045072 _Gut.Meta.Jp.0111663_ gi|163310555|dbj|BABD01000145.1||3 (+ 1662:2028~0 complete) | ali follow.. | 6 | 33 | ........WDGTINKAKLTKYLQLSSQQNEQVASICDYFQEQMKVANSSKKNSDQKVRNAVYGNLKLMKNTLTEKQYSDYLR. | 106 |
| 2 | -3.230 | HGC00803 gi|163280588|dbj|BABD01030100.1|2.0 TMP01051; | ali follow.. | 12 | 33 | ..........VDKVKDELQKVIDLLESGETDTEVIQETLDE----AVCGINDLQEEFDENDSEIETVARDCIGVTV....... | 94 |
| 3 | -3.160 | PB001025 Q1QFV3_NITHX/1-288 PB001025; Pfam-B_1025; | ali follow.. | 5 | 1 | ......MIRRSSEEVLQFSDMKSDSPDLKTAMLGRIRADEPRKVWTPSDFDAVDKTLQRLTKAEAL................. | 66 |
| 4 | -2.810 | PB011130 gi|88806557|ref|ZP_01122074.1| hypothetical protein RB2501_00756 [Robiginitalea biformata HTCC2501]gi|88783389|gb|EAR14561.1| hypothetical protein RB2501_00756 [Robiginitalea biformata HTCC2501] | ali follow.. | 20 | 16 | .......................IDENAYQKLLRYLEAVKRGTAGSDEIIADIEARIAELFYEKMENERQVITQKEVDAVIAI | 78 |
| 5 | -2.780 | PB017124 _Gut.Meta.Jp.0039711_ gi|162659581|dbj|BAAX01000024.1||2 (+ 385:1498~0 complete) | ali follow.. | 20 | 254 | ...............................LDWAVD--SDGNPKHLDHADFIRIQSGVLQQCGWT----ETSTEV....... | 293 |
| 6 | -2.720 | HGC00374 gi|162831834|dbj|BABA01012875.1|1.0 TMP00304; | ali follow.. | 9 | 98 | ..........VAKNYMTHEEISTLNLIVNMYLDYAELQAKGHIPMHMADWESKLGDFLRFNGREVLENFGTVKREVAEKLALE | 170 |
| 7 | -2.580 | PB009661 _Gut.Meta.Jp.0000785_ gi|162567239|dbj|BAAU01000237.1||2 (- 3549:4008~0 complete) | ali follow.. | 16 | 4 | ..........................REGELLDEAVDFCRK-RGLEFYAVNS--NMPEEEADMSALRSRKVSADMYIDD.... | 53 |
| 8 | -2.300 | HGC00878 gi|162869432|dbj|BABB01000575.1|7.0 TMP01167; | ali follow.. | 14 | 50 | ...........................................VYPEEEIKKLVESLEDKDKVYI----KILTYEFEDEYVS. | 84 |
| 9 | -2.200 | PB034180 _Gut.Meta.Jp.0112129_ gi|163310377|dbj|BABD01000320.1||2 (+ 509:1679~0 complete) | ali follow.. | 7 | 50 | .KLGMYIAAYLEDQISELGLWQSFTAEHKRLYGKYLPFYPTNSNYVADEINE............................... | 100 |
| 10 | -2.200 | HGC00106 gi|162841414|dbj|BABA01003295.1|1.0 TMP01000; | ali follow.. | 14 | 8 | .......................................................KLSNLTIGYTLPIRNNKYMKSLRVYVS. | 34 |
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Li W, Godzik A. cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences. Bioinformatics. 2006 May 26; |