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Query: PF11166.8; Q2FYD6_STAA8/2-99; Protein of unknown function (DUF2951 topsan), from PfamA32U

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .
# Score Template Links and tools%idFirst FGFTKRHEQDWRLTRLEENDKTMFEKFDRIEDSLRTQEKIYDKLDRNFEELRRDKEEDEKNKEKNAKNIRDIKMWILGLIGTILSTFVIALLKTIFGILast
1 -5.290HGC00762 gi|162641591|dbj|BAAX01018014.1|1.0 TMP00997;  ali follow..  14  1......................................MTPYKVSHQLKKLNNSSSLTKKNMTMEENTVHPARKLLLGQLIAYLLQAVAVVV...... 54
2 -4.310PB003142 Q8DVS6_STRMU/1-162 PB003142; Pfam-B_3142;  ali follow..  9  103....................RVLNKSKKQSAVSTKAQAEMQKLHEALKKEKKSQSKEKRQALKQYKYQLKQEK......................... 155
3 -3.910PB019278 gi|154508461|ref|ZP_02044103.1| hypothetical protein ACTODO_00960 [Actinomyces odontolyticus ATCC 17982]gi|153798095|gb|EDN80515.1| hypothetical protein ACTODO_00960 [Actinomyces odontolyticus ATCC 17982]  ali follow..  3  1............MDTIDNFLDAMFAPYPASTRLTDAKVELRAMMEDAYADAIASGMTHNEAVGRVITDFGNLQEIA...................... 64
4 -3.820PB030138 Q7MX14_PORGI/1-113 PB030138; Pfam-B_30138;  ali follow..  15  22........YDQRRDELEKRIERIRREVEQEEQAELDGQSSSHDYSGYRPRIRHLKERQLQGETQSTRSGRTLRTLALLIAVCLLSWLVFKVI...... 113
5 -3.490HGC00803 gi|163280588|dbj|BABD01030100.1|2.0 TMP01051;  ali follow..  19  33...............VDKVKDELQKVIDLLESGETDTEVIQETLDEAVCGINDLQEEFDENDSEIETVARD........................... 88
6 -3.490PB000520 Q9RVX4_DEIRA/1-194 PB000520; Pfam-B_520;  ali follow..  10  58...........RVGRATDRVRGLTSRFKQLVSAEGQNEPLAREEKRLI-----IRQLPRLSRRTRFLM-RALQAFYTSVALLVLTSILLGL....... 131
7 -3.450PB001708 Q3IRP6_NATPD/1-505 PB001708; Pfam-B_1708;  ali follow..  9  1........................................................MNEGIPEQLIRRLSDASRLVPLALLAVVAAVIYVWRPLFHGL 42
8 -3.400HGC00870 gi|163286116|dbj|BABD01024572.1|2.0 TMP01154;  ali follow..  16  88..................SDNRLNQALAALRKAILTPTNQNWNALQCFSEIRREHETIQKQLKGNKEQAEE........................... 149
9 -2.980PB000795 Q74Z21_ASHGO/1-280 PB000795; Pfam-B_795;  ali follow..  6  210.........NWQARALYIDFWMLGDAARELPDNSWQKHRARELGNLVMNMFDPEDVSTVDKCRKFLQKE............................. 269
10 -2.960PB007733 A3U921_9FLAO/1-209 PB007733; Pfam-B_7733;  ali follow..  11  48...FTSDLERRRYLILRRKTRKVWPYAKLASERLSELNARLASIKSKSERRKYTKIVQKYIEEQFAAELKKLTRILVKLIHRQTGVTTFQLIKNLRS. 145
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 0 9 1   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Plewczynski D, Rychlewski L, Ye Y, Jaroszewski L, Godzik A. Integrated web service for improving alignment quality based on segments comparison. BMC Bioinformatics. 2004 Jul 22;5(1):98.