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Query: PF11591.8; A1YQX2_VOLCA/1-34; Ferredoxin chloroplastic transit peptide, from PfamA32U

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30
# Score Template Links and tools%idFirst MSMAVRSSFAARVAGARPAVRAARPSARTVSVNALast
1 -1.360HGC00106 gi|162841414|dbj|BABA01003295.1|1.0 TMP01000;  ali follow..  20  42..........TGYSGLDPELRDTYPTTRSFTFGV 77
2 -0.535PB012472 gi|62259485|gb|AAX77857.1| unknown protein [synthetic construct]  ali follow..  253......TELTKQNNSLKKEHKKAINFSDKANLNM 280
3 -0.504PB155142 _HOMD.0127537_ bfor_c_1_1790 Tannerella forsythia ATCC 43037 [677748 - 680894] ORF  ali follow..  19  22...ILKDAAATALYGSRGATKSGRRGKTHIAFTA 59
4 -0.350PB014033 A5ZI39_9BACE/1-158 PB014033; Pfam-B_14033;  ali follow..  15  1..MAMHTWFECKIRYEKVMENGMKKVTEPYLVDA 33
5 -0.218HGC00857 gi|162620543|dbj|BAAW01002606.1|2.0 TMP01139;  ali follow..  12  60REKTTSPNLETIIAKNLIPIRPDRHRERNLK... 90

FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Jaroszewski L, Godzik A. Clustering of highly homologous sequences to reduce the size of large protein databases. Bioinformatics. 2001 Mar;17(3):282-3.