current user: public
If you have questions about the server, please let us know.

Query: PF11695.8; Q9A5F4_CAUVC/31-168; Domain of unknown function (DUF3291 topsan), from PfamA32U

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .  130    .
# Score Template Links and tools%idFirst LAQVNVGRLKAPIDHPMIKDFADNLDRINALAEASPGFVWRLTGEGNNATDLAIDSDPLFIPNLSVWSDIPSLGAFVYRSGHVEIMRRRREWFEHMDLYMALWWVPAGHTPTVEEALEKLAHLEAHGPTPAAFTFKVPLast
1 -3.880HGC00965 gi|163282470|dbj|BABD01028218.1|2.0 TMP01310;  ali follow..  9  20...................HYLQNKNSFSGNEDGMRYLITPGKRSVPDPDGGEEAKKEEAILTVDLWPEPWTLD----KTDPALRRREIFPMTEEGRTAVAQYLNDNAEPERWSAHPSILDCEPWTPPAPE....... 129
2 -3.590PB008694 Q9F6U1_BACTN/1-190 PB008694; Pfam-B_8694;  ali follow..  20  9................................................................SIWRTPP---------------RKRRKW------RFTVW--PSGNLPKSGETRKQPTIKNEFINEKRKMRMN.. 67
3 -3.310PB035451 Q3Z7G7_DEHE1/1-135 PB035451; Pfam-B_35451;  ali follow..  20  102....................................................................................................VIFKIERIDIPENEEEREWLEKQNFKNTVDDAYT.... 135
4 -2.930PB025553 _HOMD.0078651_ pint_c_1_4510 Prevotella intermedia 17 [1755134 - 1755736] ORF  ali follow..  10  15.............................................................YLLYMWQIEDIIRVYGCSTRIRKEYIDKFDYTDEQKEEEEDWFGENGHLQINKVVMQALTELHTQ............ 92
5 -2.720PB027498 Q7MTK6_PORGI/1-146 PB027498; Pfam-B_27498;  ali follow..  16  72.................................................................VYYDDEELDRYAGVLPEEYNTEAVEEFEE------ILSTLQEEEVPSWIRSLQM................... 119
6 -2.360HGC00509 gi|162658693|dbj|BAAX01000912.1|3.0 TMP00561;  ali follow..  14  23.....................................LIGKRKDEDDMAKSTKTYEERIRALEKKEQESIEATKKLIAQRKELEKRKKAEESKKRTHRLCQIGGAVESVLPIEEEDLPKLIGFLKRQETNGKFFSKA. 124
7 -2.300PB001025 Q1QFV3_NITHX/1-288 PB001025; Pfam-B_1025;  ali follow..  7  1...............................................................MIRRSSEEVLQFSDMKSDSPDLKTAMLGRIRADEPRKVWTPSDFVDLASRDAVDKTLQRLTKAE........... 64
8 -2.120PB009510 _JGI.0345302_ 2004041369 [Human Gut Community Subject 8]  ali follow..  9  7.................TPGFYDKSYVGKWMFQVMGLEYDKALKLAEELPEQFFPET--ATWGLCWHEIKWGLPV-YHSPMTPYIMERYLENATGFTVHIA---FNGDGTLDSKKVRKLIDKLK---ESHTTYFVN.. 155
9 -1.980HGC00485 gi|163636056|dbj|BABG01000217.1|3.0 TMP00523;  ali follow..  9  28LTVMADAVSECRTAADQAAELLLRLAEVWSAIRAKEGMGGLILEGTEAKILSDVVAQFYAYLSGCMFNDPVGMAIYAELHYMMSSLM-LGEWFE............................................ 127
10 -1.960PB032818 Q5LA03_BACFN/1-211 PB032818; Pfam-B_32818;  ali follow..  8  91FKEIDTSIKKNCRTQNDVQAYLFMYQGFSSDLMMLMGNL-RMPAIFKKALRSMTEKTVHDVCTKTVWKADDVHKTAAAVRQYKERLGFSEQWMSEYVYNIVL.................................... 196
FFAS is supported by the NIH grant R01-GM087218-01
1 4 7 7 1 8   jobs submitted since Jan 1, 2011
Comments and questions to: webmaster
Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Bossy-Wetzel E, Barsoum MJ, Godzik A., Schwarzenbacher R, Lipton SA. Mitochondrial fission in apoptosis, neurodegeneration and aging. Curr Opin Cell Biol. 2003 Dec;15(6):706-16. Review.