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Query: PF13053.6; Q81Q33_BACAN/1-89; Protein of unknown function (DUF3914 topsan), from PfamA32U

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .
# Score Template Links and tools%idFirst MQIGSNIHTLSQPTKITPSNLEHNTISSTKLESKKVNDPIKFDIRSSEKEMKQPEHKFNELDLWKMLKDKGVPLWIILEMLQKVRKEKELast
1 -3.420PB010473 Q8A4J5_BACTN/121-234 PB010473; Pfam-B_10473;  ali follow..  21  76....................................................RLNARYGEHGLMKLLSGKRHPRYLIHRRRLFRLLTKR 112
2 -2.590PB044863 Q5LB69_BACFN/1-105 PB044863; Pfam-B_44863;  ali follow..  18  24...............IEKYSLFQHLIDSNGIVDEAVLEKLKLNIRSLIASQEEDSKDLLDLDVIYHNNMKAFGLQQLIKLYLTWLSKQE 99
3 -2.470HGC00522 gi|163636101|dbj|BABG01000172.1|3.0 TMP00580;  ali follow..  13...........................................FDIAKQNQEKAWQVIKNTNIIQIWEDAGAKINLV............ 46
4 -2.380PB004718 Q5LIA4_BACFN/1-189 PB004718; Pfam-B_4718;  ali follow..  130..................AGGMGDFNGGFVYNLRNTNNPASARAYINLDASGMAIWHTKIKNYPLALRYQNLPV............... 186
5 -2.140PB035451 Q3Z7G7_DEHE1/1-135 PB035451; Pfam-B_35451;  ali follow..  19  99....................................TQPVIFKIERIDIPENEEEREWLEKQNFKNTVDDAY................. 134
6 -1.800PB000790 _Gut.Meta.Jp.0111831_ gi|163310496|dbj|BABD01000203.1||3 (- 2591:4589~0 complete)  ali follow..  293.....DTVEPTSEVMTYRDGYTNTDQIQEVVYNYPTASKTLYGKAMNDHLTKIITQKYQVLEIWNDHRRLGLP................ 366
7 -1.690PB069407 _HOMD.0084606_ pint_c_2_12 Prevotella intermedia 17 [3585 - 4295] ORF  ali follow..  26  213......................................................................IPFIFIIYEIFARMREENQ 234
8 -1.530PB038151 Q8A4A5_BACTN/1-178 PB038151; Pfam-B_38151;  ali follow..  1.............................................MATQAIDATIFASSHPDIAKRTSISGLLISCVMLLI........ 36
9 -1.530PB007011 gi|160888195|ref|ZP_02069198.1| hypothetical protein BACUNI_00603 [Bacteroides uniformis ATCC 8492]gi|156862330|gb|EDO55761.1| hypothetical protein BACUNI_00603 [Bacteroides uniformis ATCC 8492]  ali follow..  110.......................................AVFD-PARKDAFEEAEKLIDDKKVNIAFSSRSFEYYLLLHF......... 153
10 -1.500HGC00870 gi|163286116|dbj|BABD01024572.1|2.0 TMP01154;  ali follow..  33  120..........................................................................WNALQCFSEIRREHE 134

FFAS is supported by the NIH grant R01-GM087218-01
1 4 0 1 8 2   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Wooley JC, Godzik A. Probing metagenomics by rapid cluster analysis of very large datasets. PLoS ONE. 2008;3(10):e3375. Epub 2008 Oct 10.