|
current user: public |
|
Query: PF15432.6; F2I912_AERUA/17-140; Accessory Sec secretory system ASP3, from PfamA32U |
. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 | |||||||
# | Score | Template | Links and tools | %id | First | YAYGSQIVLENPDHIHFKNTLMPSGERITSWSSRSVFQTTKDSAKLPLLTRGESYQLIFQGKTVPEGSIFFKISFFDYYGGPIEEYYLRTPSDYFTVPDTYNYYEIALHHGGCLSLDFNQIILV | Last |
1 | -5.530 | PB040621 Q8A865_BACTN/1-132 PB040621; Pfam-B_40621; | ali follow.. | 14 | 31 | YAFGIAASF--TDTVVYFTDIQILDSA---KVSKEGFLTHR---------DLYSYQLKNYVEDNGLQQNSTCMIYFSENRKKLEKEATKILS------KRNRNTTVTRIDT--DKFHFIKPE.. | 132 |
2 | -5.390 | PB038401 Q8RFH0_FUSNN/1-210 PB038401; Pfam-B_38401; | ali follow.. | 9 | 1 | ..............MDIGPCSIPTGEFLVG-DPLVYLGSKYEKEYFQKIPTG-EFRTEICVVKASDGDAAVRLKFNDNEISYFEEAMKGIEDLKDINEGDFFGFNVD................. | 95 |
3 | -5.360 | PB035451 Q3Z7G7_DEHE1/1-135 PB035451; Pfam-B_35451; | ali follow.. | 14 | 34 | FKAGDEFILKRTPEQDDFYHLMDGKFCGEAWDA--------ISRYVYTALQGGSIRMMIACCNDGTQPVIFKIERIDIPENEEEREWLEKQNFK---NTVDDAYT................... | 135 |
4 | -4.160 | PB029229 gi|150007903|ref|YP_001302646.1| hypothetical protein BDI_1263 [Parabacteroides distasonis ATCC 8503]gi|149936327|gb|ABR43024.1| conserved hypothetical protein [Parabacteroides distasonis ATCC 8503] | ali follow.. | 14 | 34 | .....................................................TLRVDFDWKNAPQADP-MCVYFYPEEGESPIRFDFAGKDGSVEIKEG--RYRILCYNNDTESLLFRG.... | 100 |
5 | -3.930 | HGC00044 gi|162658718|dbj|BAAX01000887.1|1.0 TMP00920; | ali follow.. | 13 | 39 | YGFGYGLSYTT--NVKVTNTGKVPGKTSVQIYGQAPYTEGGLEEKSSELAPGASEIVSVKVDLQ-------YIASYDMEHD-------NGDGTTGTYVLDPGTYYFAAGNGAHDALNNILVLQ. | 182 |
6 | -3.800 | PB032818 Q5LA03_BACFN/1-211 PB032818; Pfam-B_32818; | ali follow.. | 10 | 20 | ...GNVEDFVSLTRVYFQ-SVIAVNLGITNIRFLPDVANFKRLFKVATQGGKLGLAEKSASRKMLMQDYGISESFFKEIDTSIKKNCRTQNDVQYLFMYQGFSSDLMMLMGNLMQWKFR..... | 135 |
7 | -3.300 | PB064361 Q64PJ4_BACFR/1-580 PB064361; Pfam-B_64361; | ali follow.. | 12 | 97 | ...GKPTTSTSNIPAYWQST---ASQTVYGWYVSSKQYSYKENVQLNLEHQLVKFRVKLNGDVPNLSDAKVFFYGYPTCKNEYGTVIPQGDKTYLATRKVGDYYTAMLAPDTKTSNNFVKIEV. | 237 |
8 | -3.300 | PB009671 Q5LCM2_BACFN/1-111 PB009671; Pfam-B_9671; | ali follow.. | 17 | 77 | ...................................................GKVYKIIVTAIKEDQSTEEITV-LLNEKGEPVNEK...................................... | 110 |
9 | -3.120 | HGC01213 gi|163579070|dbj|BABE01006032.1|2.0 TMP01709; | ali follow.. | 15 | 155 | ....RVLTITSGQETIYKSDLMAKGDKDVTWNTNANATLAKCTDE-AKVNAG-TYVAQLSLKDHPSDPVTFTVQ.................................................. | 240 |
10 | -3.100 | PB034180 _Gut.Meta.Jp.0112129_ gi|163310377|dbj|BABD01000320.1||2 (+ 509:1679~0 complete) | ali follow.. | 7 | 79 | .LYGKYLPFYPTNSNYVADEINEEDIRFIIWNTWQKAASNPNEHAIKEQAGIFYGILEEAYENAPENESLNHYFDHPGTAVEADRKLTWLFGHSYLTEPSMLPYIEQIAP.............. | 194 |
FFAS is supported by the NIH grant R01-GM087218-01
|
![]() ![]() ![]() ![]() ![]() ![]() |
Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Pawlowski K, Pio F, Chu Z, Reed JC, Godzik A. PAAD - a new protein domain associated with apoptosis, cancer and autoimmune diseases. Trends Biochem Sci. 2001 Feb;26(2):85-7. |