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Query: PF15935.5; I5B0B2_9DELT/91-316; RNase LS, bacterial toxin, from PfamA32U

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst HNNCITYRKIKQDDFELLLEYLDTEEAVKSESLEPYKTNNNHTIFKISSIYKDETTLTQYANQTILLQGRPLYIYNVIKSFINELIDFDQVVEIESDLYKIDLKPDVVREELESRLFAVYGRFDEKILKVMTPALSLMKIDVELEDYSCCIYPALRGLEGYIRMLLSEFSKEYKTVGRLGSLFDENKSYETMLFLKDDIKNDVVCKSLQNAYFMYVKHRHPLFHTDLast
1 -3.200HGC00928 gi|162868028|dbj|BABB01001979.1|3.0 TMP01255;  ali follow..  9  13............................................................ATEKLEMRGQSVTVENIGKTVTDGFEKVSNNVNDFISSDKPRNFFQKLADVFVLVIGFILKFFIILAGIFLLPPLVLVVFILVVVTFAFIGIPIFSLIYAICSQLFKIRPLPTQARWILLALW--------LISFILCGVYIHQSGMLYDWHNYWNGNRNAVW... 208
2 -3.100PB000821 Q82P27_STRAW/1-209 PB000821; Pfam-B_821;  ali follow..  14  64...........................................................FTEPKYIARRGDGQVVQLVASSVDGSRDIETIAHRVSGRFGREVSADNVRYLIEQKL.............................................................................................................. 126
3 -2.870PB007843 JCVI_PEP_1096682172521 /source_dna_id=JCVI_ORF_1096682172520 /offset=0 /translation_table=11 /length=152 /full_length=152  ali follow..  15  2.............................................................EKIISISGRP--LFEVHTQVATSLVDGKRINANARNQVSLLSEINIYGLEKEVPLQEVLTMIHTKEEG--QCSVKPKSPADELEAYFFDVFQDYRVYPSDIKKIIQWYNILAEK................................................... 121
4 -2.830PB062763 Q9F6U5_BACTN/1-245 PB062763; Pfam-B_62763;  ali follow..  5  152.......SGSAFEDIDMAVRTIKKDSPSEAEMR---------------------------HAGKVMTELDGTELYSRITERLTDEPMSERLAKAMAVFVDTVNTTVAQPKTKVFVVLDNIEEFE...................................................................................................... 241
5 -2.780PB044380 A7LRP7_BACOV/1-223 PB044380; Pfam-B_44380;  ali follow..  12  134.......RVVTPDDLDNAGNVLFKLNDADKDEEKSL------------------------RAALTLHTIRETDLFEIFSSQVENKNVIDSLMGKYLDGNGNPLSVRKTKSV................................................................................................................... 213
6 -2.770PB003564 gi|46242789|gb|AAS83494.1| TraD [Bacteroides fragilis]  ali follow..  7  152.......SGSSFEDIDMAVHTIWKESPSDEEMR---------------------------HAGKVMTELDGTELFTRITERLTDEAMSERLAKAMAVFVDTVNMTVTQQKEKVFVIPDNIEEFD...................................................................................................... 241
7 -2.740HGC00878 gi|162869432|dbj|BABB01000575.1|7.0 TMP01167;  ali follow..  7  9....FHARTENKTDLDKIEDFLDDTFSEFTNRYGDSVDAEFSSRWVYPEEEIKKLVESLEDKDKVYIKILTYEFEDEYVSF................................................................................................................................................. 85
8 -2.730HGC01024 gi|162869036|dbj|BABB01000971.1|4.0 TMP01399;  ali follow..  9  30.........IQPDRMENILYDYHLSISMGNNLSYSDNYQKEAYKNYVFEKHH--ITEAEFDSSMVWYTRHTASLYKKLGERFRSEKKMQELLALRENKPAVSLPGDTVD..................................................................................................................... 131
9 -2.700PB011130 gi|88806557|ref|ZP_01122074.1| hypothetical protein RB2501_00756 [Robiginitalea biformata HTCC2501]gi|88783389|gb|EAR14561.1| hypothetical protein RB2501_00756 [Robiginitalea biformata HTCC2501]  ali follow..  13  3............................................................KTVNINLANMLFHIDENAYQKLLRYLE------AVKRSFAGTAGSDEIIADIEARIAELFYEKMENERQVITQK............................................................................................ 70
10 -2.650PB001572 gi|163816107|ref|ZP_02207475.1| hypothetical protein COPEUT_02291 [Coprococcus eutactus ATCC 27759]gi|158448527|gb|EDP25522.1| hypothetical protein COPEUT_02291 [Coprococcus eutactus ATCC 27759]  ali follow..  12  112......................................................VQIKLAPVNAPYFDGAKLLIAADCTAYAYASFHEKFIKGHVTLIGCPKLDSVDYSEKLTEIIRRN------------IQSVTIVRMEV----------PCCGGLEMAAKKALQDSG........................................................ 206
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Plewczynski D, Rychlewski L, Ye Y, Jaroszewski L, Godzik A. Integrated web service for improving alignment quality based on segments comparison. BMC Bioinformatics. 2004 Jul 22;5(1):98.