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Query: PF16134.5; E9CUD7_COCPS/133-865; THO complex subunit 2 N-terminus, from PfamA32U

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst LTDDRIKNWSSTGKQQVVEVGKEACSNVDTITLASLFQEVIQSAFECRIPPVEGGAVVKQIIGERSDSNDGDRTAPYLAFDSHSIFLDTLSILTDADSSRENLRPLAFATGISPSLMRLQLDTPLLQALGLIRDTFGRMGIRKQTNILYRQSNYNLLREESEGYSKLLTELFTTSNNEPPSSEVVEDTFERVKAMIGAFDMDVGRVLDVTLDVFAAVLVKQYRFCVKFLRASSWWPKEDNAPEGGIGLGLPKWALPGSPGWSTTDEEREEALRLNEHRDRLFWDRAKQVGIKAFFEIGRSLASDSDNHMLVSDIDVETRDETQKWIEQTGTLPPKGNRVAAQLLGFKLRFYSSDARNATDVLPDNLIYLAALLIKVGFISLRDLYPHLWRPDEEMEVLKEEKMKEKAEREKAGRRGAGMMNALMTAGALADDTLTLPARSRGLETRSATPAKEQEQDKDKTAPQKTEEKEQLPEPADQKVLLLKSLLAIGALPESLYILGRFPWLLDGYPELPEYIHRILHYCLHKVYQSVQPLPSRSELRDRKKIVGSEQGAVSQGRVRLSDAAPQRVLRWALLDKQDNDGTDYRFYWDDWTDSIPVCQSIDDVFALCSSFLNLSGVKIGQDPSLLTKLARIGKHSLKEDVSESNRTRWMDLCRRLLVPALSLTKNNPGVVNEVFELLNYFPQHVRFSIYAEWYFGQTSRLPDIKSAFDQARFETKDALKRLSKTNVRPMARLast
1 -3.470PB008694 Q9F6U1_BACTN/1-190 PB008694; Pfam-B_8694;  ali follow..  13  5.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................SVPKSIWRT----PRKRRKWRFTVWRRSAATSKPPSGNLPKSGETRKQPTIKNEFINEKRKM.. 64
2 -3.080PB002589 gi|91201099|emb|CAJ74158.1| hypothetical protein [Candidatus Kuenenia stuttgartiensis]  ali follow..  8  10.........................................................................................................................................................................................................................................................................................................................................................WFGQHIEKKNLRTDDGLRLEIFKHAEFFLERGSVEIHDWIHHKHENQKTYDAVCLHVVMWNDLKGRCVKNFSGKVPQITLSLYLEAELDEIIETIDVGSYIGNKQVIPGYCNLEMRKQKITQQDYAGDERILQKAKKYEKWIENKPFERVLYIMESLGYKNNKKPMLASLV-TIQSFVPEYTPAQEKKIIAQSLLLGMAGLLPLNEEETKRTGIRPANFPDRRIVAIANILSEHLDNGLFRYILRIFQKRDDTKKNTRGFKSFVNEFLSPFLETHD---AYWSYRYTPGGKKLNKPQKLLGKERTSNIFVNVIIPVYARKHNDKALEERLHYIYRNYTPHPS-TSVTKFMGTRIFGTSMVSNKVIHSARRQQGLYQ............ 454
3 -2.910PB007147 Q11UU2_CYTH3/1-245 PB007147; Pfam-B_7147;  ali follow..  14  21..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................IQKIVDWILTIEDREQRTRYANTCVELMRQ-LNPGV---RDTEEHTTKLWDIMSNFKLDVKYKHYGKNINLLIEQAILKEAEKEDAIIYLGRLMKRLNKENVDD... 155
4 -2.800PB010473 Q8A4J5_BACTN/121-234 PB010473; Pfam-B_10473;  ali follow..  10  5...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................LPLEAMEYEINKGAGNPLEFKGLKFIFAGGLVAVLLVVVILYIAG-------------VNQWICIPFGLLSGSLL-------VWLTFRLNARYGEHGLMKLLSGKRHPRYLIHRRRLFRLLTKRRK............ 114
5 -2.790HGC00024 gi|162813637|dbj|BABA01031072.1|2.0 TMP01508;  ali follow..  10  102...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................VATNSNLRWYWGNAYTNTFLENITDCPMEESKKEQW-KCLRAYFFLNLAFYYTD-DEANSISQTPQTEVYSQVEKDLKTAIDLLPVHYLRGIWR 212
6 -2.790PB000520 Q9RVX4_DEIRA/1-194 PB000520; Pfam-B_520;  ali follow..  9  24..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................LKRMPQPVTALLAAMITPAV-LISGAGTLIMSTSTRVGRATDRVR-GLTSRFKQAEGQNEPLAREEKRLIIRQLPRLSRRTR......... 106
7 -2.540PB044863 Q5LB69_BACFN/1-105 PB044863; Pfam-B_44863;  ali follow..  16  11...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TRSMEISEENLVTIEKYSLFQHLIDVLEKLKLNIRSLIASQEEDSKDLLDLMKAFGLQQLIKLYLTWLSKQEAEEEE............................. 104
8 -2.530HGC00928 gi|162868028|dbj|BABB01001979.1|3.0 TMP01255;  ali follow..  9  2......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................FVWIIVPMARTATEKLEMRGQSVTVENIGKTVTDGFEKVSNNVNDFISSDKPRNFFQKLADVFVLVIGFILKFFIILAGIF--LPPLVLVVFILVVVTFALLMGGAGFIYNLSPFGADLINGAPLSMAIMGCIGTILFIGIPIFSLI----AICSQLFKI-RPLPTQARWILLALW....................................... 172
9 -2.430PB014998 gi|86133284|ref|ZP_01051866.1| hypothetical protein MED152_01230 [Tenacibaculum sp. MED152]gi|85820147|gb|EAQ41294.1| hypothetical protein MED152_01230 [Polaribacter dokdonensis MED152]  ali follow..  5  92..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAKICEHLANAYYSKRDNEFKSKLKNEHIQEII-GFDWLITPQKIAVRAYTMNTLYLFGLENELKHLIETKIIHESKGTK-------ARGKHILNLIEKHQ...... 191
10 -2.380PB030138 Q7MX14_PORGI/1-113 PB030138; Pfam-B_30138;  ali follow..  14  21..................................................................................................................................................................................................................................................................................................................................................................................................YYDQRRDELEKRIERIRREVEQEEQA-------------------ELDGQSSSHDYSGYRPRIRGTFVEGTQHLKERQLQGETQSTRSGRTLRTLALLIAVCL.................................................................................................................................................................................................................................................... 104
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 3 4 1   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Jaroszewski L, Slabinski L, Wooley J, Deacon AM, Lesley SA, Wilson IA, Godzik A. Genome pool strategy for structural coverage of protein families. Structure. 2008 Nov 12;16(11):1659-67.