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Query: PF00389.30; Q9KCG9_BACHD/20-325; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain, from PfamA32U

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst ILVSDAMSEQGLSPLLNDPRVECVQQNVADADDLHEYDALLVRSATTVTEELMEKMSSLKIIARAGVGVDNIDIDAATKHGIVVVNAPDGNTISTAEHTFAMICSLLRKIPQANASIKAGEWKRKAFQGTELRGKTLGIIGFGRIGSQIAKRAKAFEMTPYVFDPFLTKARAEKLGVTVASLDDVLQVADIITVHTPLTKETKGLLGMKNIGKTKKGVFLINCARGGIIDEEALKHYLREGHIAGAALDVFEEEPVADEELLAFDNVIATPHIAASTKEAQLNVAEQVSQEVLHFLEGNPVSNSINLast
1 -5.010sp|Q9UBI9|HDC_HUMAN Headcase protein homolog OS=Homo sapiens GN=HECA PE=1 SV=1  ali   11  24.....................................................................DYQKVVCNNEHCPCSTWMHLQCFYEWESSILVQFNCIGRARSWNEKQCRQNMWTKK---GYDLAFRFCSCCGQGHLKKDT............................................................................................................................................................. 101
2 -4.900sp|A4D1E1|Z804B_HUMAN Zinc finger protein 804B OS=Homo sapiens GN=ZNF804B PE=1 SV=2  ali   10  1......................................................................................................................................................................................QAHFSPISFSTLTPTIIPAHPTFLAGHPLHLVAATPFHPSHITLQPLPPTAFIPTLFGPHLNPATTSIIHLNPLI-QPVFQGQDFCHHSCSSQMQQLNEVKEALNVSTHL.............. 109
3 -4.630sp|Q8IYH5|ZZZ3_HUMAN ZZ-type zinc finger-containing protein 3 OS=Homo sapiens GN=ZZZ3 PE=1 SV=1  ali   13  4.....................................................................................................................................................................................................FESDHVALKHNKDYQRLLQTIAVLEAQRSQAVQDLESLGRHQREALKNPIGFVEKLQKKADIGLPYPQRVVQLPEI................................. 79
4 -4.480sp|Q9HCC9|LST2_HUMAN Lateral signaling target protein 2 homolog OS=Homo sapiens GN=ZFYVE28 PE=1 SV=3  ali   12  14..........................................RSDPQLLARFYYADEELNQVAAE---LDSLDGRKDPQRCTLLVS----QFRSCQDNVLNIINQIMDECIPQDRAPRDDNLAGQLWFGAECLAAGSIIMNRELESMAMRPLAKELTRSLEDVRGALRDQALRDLNTYTEKMREALRHFDFAEFELSYVSAMVPVKSPREYYVQQEVIVLFC---------ETVERALDFGYLTQDMIDDY--EPAL---------MFSIPRLA................................ 231
5 -4.450sp|Q15413|RYR3_HUMAN Ryanodine receptor 3 OS=Homo sapiens GN=RYR3 PE=1 SV=3  ali   11  1.........................................................................................................LKNAMPLSAAIFRSEEKNPVPQCPPRLDVQTIQPVLWSRMPNSTERVSERHGWVVQCLEPLQMMALHIPEENRCVDILELCEQEDLMRFHY----HTLRLYSAVCALGNSRVAYAL-------VDLSQLFYAIDNKYLPGLLRSGF--------------DLLISIHLASAKERKLMMKNEYII................. 168
6 -4.390sp|Q8WV92|MITD1_HUMAN MIT domain-containing protein 1 OS=Homo sapiens GN=MITD1 PE=1 SV=1  ali   12  12..............................................................................................................................................................EVWIEDPYIRHTHQLYNFLRFCEM-KRPCKVKTIHLLTSLDEGIEQVQQSRGLQEIEE-----SLRSHGVLLEVQYSSSIHDREIRGRGLDYFKKPQ................................................... 113
7 -4.250sp|P21817|RYR1_HUMAN Ryanodine receptor 1 OS=Homo sapiens GN=RYR1 PE=1 SV=3  ali   12  27................................................................................................................................................LQVETRRAGERLGWAVQCQEPLTMMALHIPEENRCMDILELSERLDLQRFHS----HTLRLYR----AVCALGNNRVAHALCSHVDQAQLLHALEDAHLPGPLRAGY--------------DLLISIHLESACRSRRSMLSEYIV................. 150
8 -4.210tr|Q0PRL4|Q0PRL4_HUMAN Forkhead box P2 variant 3 OS=Homo sapiens GN=FOXP2 PE=2 SV=1  ali   11......................................................................................................................................................................................ESICEDFGQFLKHL----NNEHALDDRSTAQCRVQMQVVQQLEIQLSKERERLQAMMTHLHMRPSEPKPSPKP................................................... 79
9 -4.210sp|Q9Y4D8|K0614_HUMAN Probable E3 ubiquitin-protein ligase C12orf51 OS=Homo sapiens GN=C12orf51 PE=1 SV=5  ali   11  10........................................................................................GHVANSMAAEVIALL----HSLLMAPESNAAQIWTTEKVLSRALM-AALCALG--KIGSEVQVLGRGIGIATVRFPPIDCRKTSQASDTLTIPLSRLCVPRSELSITEKVVQAVQSMLLPQEGSLSIHTSLPATGDGSAPVMAVVRLLAEIRTRACLVMAQLLEDSLFCEEFIQQCPAAVEVLNLVAQECSAGERLAVVEVQ................ 266
10 -4.050sp|Q8N6M6|AMPO_HUMAN Aminopeptidase O OS=Homo sapiens GN=AOPEP PE=1 SV=2  ali   12  16....................................................................LDCCDLSVLKVEEVDVAAVPGLEKFTRSPELTVVSEEFRNQIVRELVTLPANRWREQL----DYYARCSQAPGCGEL................................................................................................................................................................. 88

FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Friedberg I. and Godzik A Connecting the Protein Structure Universe by Using Sparse Recurring Fragments. Structure (Camb.) (2005) Aug;13(8):1213-24