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current user: public |
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Query: PF01128.19; ISPD_ECOLI/8-229; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, from PfamA32U |
. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 . 170 . 180 . 190 . 200 . 210 . 220 | |||||||
# | Score | Template | Links and tools | %id | First | VCAVVPAAGFGRRMQTECPKQYLSIGNQTILEHSVHALLAHPRVKRVVIAISPGDSRFAQLPLANHPQITVVDGGDERADSVLAGLKAAGDAQWVLVHDAARPCLHQDDLARLLALSETSRTGGILAAPVRDTMKRAEPGKNAIAHTVDRNGLWHALTPQFFPRELLHDCLTRALNEGATITDEASALEYCGFHPQLVEGRADNIKVTRPEDLALAEFYLTR | Last |
1 | -5.690 | sp|Q9UPP5|K1107_HUMAN Uncharacterized protein KIAA1107 OS=Homo sapiens GN=KIAA1107 PE=1 SV=2 | ali | 18 | 8 | ...................................................................................................................................DTLAQTRMYDHRPSKTL--SPIYEMDVIEAFEQKV-----SETHVTDMDFEDDQHFAKQ-----QLLSEQDSNLDVTNPEDLSLAQYLINQ | 95 |
2 | -5.300 | sp|Q6ZP01|RBM44_HUMAN RNA-binding protein 44 OS=Homo sapiens GN=RBM44 PE=2 SV=2 | ali | 10 | 33 | ......................................................................................................PEVSRDHIINALQEVRIRHKGFLNGLSITTIVEMTSS................................................................................... | 69 |
3 | -5.200 | sp|Q8WTZ4|CA5BL_HUMAN Putative carbonic anhydrase 5B-like protein OS=Homo sapiens GN=CA5BP1 PE=5 SV=2 | ali | 16 | 33 | ..................................................................................................DYTRICIQREMVPARIRVLREMVPEAWRCFPNRLPLLSIRPDFSKAPLAYVKRWLWTARHPH.............................................................. | 95 |
4 | -4.710 | sp|Q69YN4|VIR_HUMAN Protein virilizer homolog OS=Homo sapiens GN=KIAA1429 PE=1 SV=2 | ali | 12 | 1 | ...............................................................................................MAVDSAMELLFLDTFKHPSAEQSSHIDVVRFPCVVYINEVRVIPPGVRAHSSLPDNRAYGETSPHTFQLDLFFNNVSKPSAPVFDRLGSLEYDENTSIIFRVLRGWYNCLTLA.............. | 123 |
5 | -4.450 | sp|Q6Q759|SPG17_HUMAN Sperm-associated antigen 17 OS=Homo sapiens GN=SPAG17 PE=1 SV=1 | ali | 11 | 2 | .............................................................................................FVMYADGS-ELLRDSDIEEYLSLAYKESNTVVLQEPVQEQPGTLT----TVLRPFHEASPWQVKKEDTIVPPNLRSRSWETFPSVEKKTPGPPFGTQIWKGLCIESKQLVSAPLKSPSVLQMRQFI... | 128 |
6 | -4.400 | sp|Q8TBZ2|MYBPP_HUMAN MYCBP-associated protein OS=Homo sapiens GN=MYCBPAP PE=1 SV=2 | ali | 9 | 26 | .........................................................................................................ERKVLESKLTAHEAVTVVREVLQELLMGVLTPERTPSPVDAYLTEEDLFRHRNPPLHYEHQVVQSLHQLWR.............................................. | 96 |
7 | -4.320 | sp|Q6ZQQ6|WDR87_HUMAN WD repeat-containing protein 87 OS=Homo sapiens GN=WDR87 PE=2 SV=3 | ali | 30 | 33 | ............................................................................................................................................DCYIPNSVIRARLWPEGTPIYLQCNL........................................................ | 58 |
8 | -4.120 | sp|Q14865|ARI5B_HUMAN AT-rich interactive domain-containing protein 5B OS=Homo sapiens GN=ARID5B PE=1 SV=3 | ali | 21 | 14 | ........GLNSRLPAGYSHSLQYLKNQTVLSPLMQPLAFHSLVMQRGIFTSPTNSQQLYRHLAAATPVGSSYGDLLHNSAAINPQAAFPSSQLSSVHPSTK........................................................................................................................ | 111 |
9 | -3.940 | sp|A0AVI2|FR1L5_HUMAN Fer-1-like protein 5 OS=Homo sapiens GN=FER1L5 PE=2 SV=2 | ali | 12 | 17 | .............................................................................................................................................................YPPIKIFNIINSLNTSNASSSILPTQDPNLKPTIDHEWKLHPGPTNHLSDIFPE........... | 70 |
10 | -3.930 | sp|Q9C0F0|ASXL3_HUMAN Putative Polycomb group protein ASXL3 OS=Homo sapiens GN=ASXL3 PE=2 SV=3 | ali | 12 | 2 | .............................................................................KDKRKKKDRTWAEAARLALEKHPNSPMTAKQILEVIQKEGLKETSGTSPLACLNAMLTNTRIGDGTFFKIPGKSGLYALK................................................................. | 82 |
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Alonso A, Rahmouni S, Williams S, van Stipdonk M, Jaroszewski L, Godzik A, Abraham RT, Schoenberger SP, Mustelin T. Tyrosine phosphorylation of VHR phosphatase by ZAP-70. Nat Immunol. 2003 Jan;4(1):44-8. Epub 2002 Nov 25. |