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Query: PF01402.21; Q8ZX60_PYRAE/47-86; Ribbon-helix-helix protein, copG family, from PfamA32U

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40
# Score Template Links and tools%idFirst LISVHVPKKMLEELDELVRRGIFPNRSEAIRAALRDLLYKLast
1 -4.380sp|O95427|PIGN_HUMAN GPI ethanolamine phosphate transferase 1 OS=Homo sapiens GN=PIGN PE=2 SV=1  ali   10  38.LSDSKQFNILRKARSYIKHRKFDEVVSLCKELIHLAL.. 74
2 -4.090tr|E9PJ12|E9PJ12_HUMAN Uncharacterized protein OS=Homo sapiens GN=BRPF3 PE=4 SV=1  ali   12  17LTLSFTSVCLYSRLNKICSGLSFQRKNQFMQRLHNYWLLK 56
3 -4.050sp|O94985|CSTN1_HUMAN Calsyntenin-1 OS=Homo sapiens GN=CLSTN1 PE=1 SV=1  ali   18  26..VLTLEGEDLGELDKAMQHISYLNSRQFPTPGIR..... 58
4 -3.960sp|Q9BQT9|CSTN3_HUMAN Calsyntenin-3 OS=Homo sapiens GN=CLSTN3 PE=1 SV=1  ali   11  26..LLTLEGDDVETFNHALQHVAYMNTLRFATPGVRPL... 60
5 -3.710tr|D6R9T9|D6R9T9_HUMAN Uncharacterized protein OS=Homo sapiens GN=C4orf41 PE=4 SV=1  ali   14  7....DFPVELCCRPMAFVTLTGLDVVYNAVHRAVWDAFC. 41
6 -3.710sp|O15265|ATX7_HUMAN Ataxin-7 OS=Homo sapiens GN=ATXN7 PE=1 SV=1  ali   33  24......................FDSRWNRLRCALNLMVEK 41
7 -3.690sp|Q5T6C5|AT7L2_HUMAN Ataxin-7-like protein 2 OS=Homo sapiens GN=ATXN7L2 PE=2 SV=1  ali   27  39......................FSRRLDRFCSALSSMLER 56
8 -3.680tr|Q9BTQ8|Q9BTQ8_HUMAN ATXN7L1 protein OS=Homo sapiens GN=ATXN7L1 PE=2 SV=2  ali   33  39......................FDRRWDRFRFALNSMVEK 56
9 -3.550sp|Q9ULK2|AT7L1_HUMAN Ataxin-7-like protein 1 OS=Homo sapiens GN=ATXN7L1 PE=2 SV=3  ali   33  28......................FDRRWDRFRFALNSMVEK 45
10 -3.170sp|P55201|BRPF1_HUMAN Peregrin OS=Homo sapiens GN=BRPF1 PE=1 SV=2  ali   18  1...VSVPCIPPHRLSKITNRLTIQRKSQFMQRLHSYWTLK 37
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 0 9 8   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Ye Y, Jaroszewski L, Li W, Godzik A. A segment alignment approach to protein comparison. Bioinformatics. 2003 Apr 12;19(6):742-9.