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Query: PF02737.18; Q2YR99_BRUA2/5-183; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain, from PfamA32U

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst TVGIIGAGQMGSGIAHVCALAGYNVLLHDAAPDRLEKGIATINGNMARQVASGKLQEEQRADAMKLIRPANSMEDLAGVDLAIEAATEDETIKRKIFAQLCPVLNPEAILATNTSSISITRLASTTDRPERFIGIHFMNPVPVMKLVELVRGIATEEDTFRKSNDFVTALGKTVTVAEDLast
1 -6.160sp|Q6MZT1|R7BP_HUMAN Regulator of G-protein signaling 7-binding protein OS=Homo sapiens GN=RGS7BP PE=2 SV=3  ali   18  9..................................................................................IENTERDMREMKNLLSKLRETMPLPLKNQDDSSLLNLTPYPLVRRRKRRFFGL............................................ 61
2 -5.950tr|A6NI76|A6NI76_HUMAN Uncharacterized protein OS=Homo sapiens GN=MRPS24 PE=4 SV=1  ali   13  18.....................................................................SLHTGNLDGEDHAAERTVEDVFLRKFMWGTFPGCLADQLVLKRRGNQLEICAVVLRQLSPHKYYFLVGYSETLLSYFYK............................... 96
3 -5.730sp|Q96EL2|RT24_HUMAN 28S ribosomal protein S24, mitochondrial OS=Homo sapiens GN=MRPS24 PE=1 SV=1  ali   13  16.....................................................................SLHTGNLDGEDHAAERTVEDVFLRKFMWGTFPGCLADQLVLKRRGNQLEICAVVLRQLSPHKYYFLVGYSETLLSYFYK............................... 94
4 -5.390sp|Q68CZ6|HAUS3_HUMAN HAUS augmin-like complex subunit 3 OS=Homo sapiens GN=HAUS3 PE=1 SV=1  ali   15  60................................SKRNKDVDMLCDTLYQGGNQLLLSDQELTEQFHKVE-----SQLNKLNHLLTDILADVKTKRKTLAN------------------------NKLHQMEREFYVYFLDEDYLKDIVE----------------NLETQSKIKAVSLED 162
5 -5.100tr|B7Z293|B7Z293_HUMAN Uncharacterized protein OS=Homo sapiens GN=ZMYND11 PE=2 SV=1  ali   15  1.............................................MARLTKRRQADTKAIQHLWAAIEIIRNQKQIANIDRITKYMSRVHGMPKETTRQLSLAVKDGLIVETLTVG............................................................... 72
6 -4.980sp|A6NFE2|CL070_HUMAN Uncharacterized protein C12orf70 OS=Homo sapiens GN=C12orf70 PE=2 SV=2  ali   11  33...........................................EKIDNIIKKINVTENTVKSLLKDMLTLKGLDLDQGTSTEVNTCNEVYELKKKVIERLEDLCKNVELLSAK.................................................................. 111
7 -4.960sp|Q9H9B1|EHMT1_HUMAN Histone-lysine N-methyltransferase EHMT1 OS=Homo sapiens GN=EHMT1 PE=1 SV=4  ali   15  28..............................................................................................................KSQTACLPFVLAAAVSRKKKRRMGTYSLVPKKKTKVLK............................... 65
8 -4.920sp|Q9H2F5|EPC1_HUMAN Enhancer of polycomb homolog 1 OS=Homo sapiens GN=EPC1 PE=1 SV=1  ali   15  6.........................................................................RDLSRAVTILEMIKRREKSKRELLHLTLEIMEKRYNLGDYNGEIMSEVMAQRQPMKP-----TYAIPII..................................... 69
9 -4.900sp|Q96F45|ZN503_HUMAN Zinc finger protein 503 OS=Homo sapiens GN=ZNF503 PE=1 SV=1  ali   13  16................................................................................................................QANRLPIKVLKMLTARTGHILHPEYLQPLPSTPVSPIELDAKKSP--LALLAQTCSQIGK....... 73
10 -4.850sp|P42704|LPPRC_HUMAN Leucine-rich PPR motif-containing protein, mitochondrial OS=Homo sapiens GN=LRPPRC PE=1 SV=3  ali   13  17........................................................................LQHCVTMNTPVEKLTD--KLKEVQMHSFPLQFTLHCALLANKTDLAK-ALMKAVKEEGFPIRPHYFWPL...................................... 85
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 0 4 6   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Godzik A. cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences. Bioinformatics. 2006 May 26;