current user: public |
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Query: PF02826.19; Q98GE4_RHILO/107-283; D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain, from PfamA32U |
. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 . 170 . | |||||||
# | Score | Template | Links and tools | %id | First | MFTALALLRQFRRVDRDLRAKGWLAGREHANANIELAGKTIGIVGLGAVGQAVGHIAAHGFDLKVVATTRSMQPAPEKVGFLSIDALVEQSDIIVLCCPLTPETRGLISRERIARMKPNALLINVSRGPVVDDDALIEALREGRIGGAALDVFSTQPLSYNHPYFGFDNVIITPHMA | Last |
1 | -6.160 | sp|A6NHR9|SMHD1_HUMAN Structural maintenance of chromosomes flexible hinge domain-containing protein 1 OS=Homo sapiens GN=SMCHD1 PE=1 SV=2 | ali | 10 | 2 | ................................................................VYLFDRREKESELGDRPLQVGERSDYAGFRAC-------------CQTLGISPEEKFVITTTSRKEITCDNFDETVKDGVT------LYLLQSVNQLLLTATKERIDFLPH.. | 94 |
2 | -5.850 | sp|A4D1E1|Z804B_HUMAN Zinc finger protein 804B OS=Homo sapiens GN=ZNF804B PE=1 SV=2 | ali | 12 | 1 | ....................................................................................QAHFSPISFSTLTPTIIPAHPTFLAGHPLHLVAATPFHPSHITLQPLPPTAFIPTLFGPHLNPATTSIIHLNPL---QPVFQGQDFCHHS... | 88 |
3 | -5.150 | sp|Q8NCM8|DYHC2_HUMAN Cytoplasmic dynein 2 heavy chain 1 OS=Homo sapiens GN=DYNC2H1 PE=1 SV=4 | ali | 10 | 13 | ....................................................IFTTTQNYFGLMSELWDQPLLCNCL-----EINNFLDDGNQMLLRVQRSDAGISFSNTIEFGDTKDKVLVFFKLRPEVITDENLHDNILVSSMLESPIS-----------SLYQAVRQVFAPMLL | 121 |
4 | -5.070 | sp|Q9NX45|SOLH2_HUMAN Spermatogenesis- and oogenesis-specific basic helix-loop-helix-containing protein 2 OS=Homo sapiens GN=SOHLH2 PE=2 SV=2 | ali | 19 | 15 | ..................................GQAKIDILLVGDVTVGYDTVQKLFANIAEVTITISDTKEA-----------ALLDDCNMVLLKVPSSLSAEELEAIKLIRFGKKKN-----THSLFV---FIIPENFKGCISGHGMDIALTEPLTMEK............... | 128 |
5 | -4.600 | sp|Q8IYH5|ZZZ3_HUMAN ZZ-type zinc finger-containing protein 3 OS=Homo sapiens GN=ZZZ3 PE=1 SV=1 | ali | 15 | 10 | .....................................................................................ALKHNKDYQRLLQTIA-----VLEAQRSQAVQDLESLGRHQREALKNPIGFVEKLQKKA----------------DIGLPYPQRVVQLPEI. | 79 |
6 | -4.420 | sp|Q8NHU2|CT026_HUMAN Uncharacterized protein C20orf26 OS=Homo sapiens GN=C20orf26 PE=2 SV=3 | ali | 11 | 4 | ..................................................RPIYRGASAAFCIQLFCIDEKYEARSLDF-MNFVFSLFSDKNFCVISLPHLTPEFFLIQNFVKMVPFNTCTLEQD----VFHRAGLLK....................................... | 88 |
7 | -4.250 | sp|Q9P225|DYH2_HUMAN Dynein heavy chain 2, axonemal OS=Homo sapiens GN=DNAH2 PE=1 SV=3 | ali | 6 | 40 | ...................................................................................LEHFAQDPTESILTIFIDPCFGLKLELGMPVQTQNQLVYFIRQAPVPITWENFEATVQFGTVRGPYIP-----------ALLRLLGGVFAPQIF | 122 |
8 | -4.180 | sp|A6NHS7|MANS4_HUMAN MANSC domain-containing protein 4 OS=Homo sapiens GN=MANSC4 PE=4 SV=2 | ali | 40 | 2 | .....................................................................................................................TSAILYNITDG--IDPDLL---------------VFEQSPTYLN................ | 28 |
9 | -4.170 | sp|Q96DT5|DYH11_HUMAN Dynein heavy chain 11, axonemal OS=Homo sapiens GN=DNAH11 PE=1 SV=3 | ali | 11 | 12 | ....................................................LGGRLAMMLGFTEEKWSQYLESED---NRQVLGEFLESTSPACLVFSFAASGRLAASQEIPRDANHKLVFISKKITESIGVNDFSQVVLFGELPALSLG------------VSAFLDEILVPVLS | 122 |
10 | -4.140 | tr|E9PIN2|E9PIN2_HUMAN Uncharacterized protein OS=Homo sapiens GN=PDE4DIP PE=4 SV=1 | ali | 19 | 14 | ............................................................................................................DGEMVPRTSHTAAFLSDTRGPPVQSQIWRSGEKVPFVQTYSLRAFEKPPQVQTQALRDFEKV---SHVS | 81 |
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Lukasz Jaroszewski, Zhanwen Li, S. Sri Krishna, Constantina Bakolitsa, John Wooley, Ashley M. Deacon, Ian A. Wilson, Adam Godzik, Exploration of Uncharted Regions of the Protein Universe. Plos Biology. 2009 Sep. 7(9):e1000205 |