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Query: PF03224.14; VATH_ORYSJ/2-323; V-ATPase subunit H, from PfamA32U

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst DHAELTTEQVLKRDIPWESYMANKLISGTCLQLLRRYDHKPESQRGPLLDEDGPSYVRVFLNILRNISKEDTVEYVLALIDEMLAVNPKRAALFYDNSLSGEDIYDPFLRLLLKGNWFVQEKSCKILTQIISARPKMQNGIVPNGEASNSKSKLTSTQDVLRGLVDWLCSQLRNPTHPNCSVPTAMHCLATLLREQYVRALFVQADGVKLLIPLISPASTQQSIQLLYETCLCIWLLSFYDAAVDYLSTTRVMPRLVEVVKGSTKEKVVRVVIMSIRNLLAKGAFAAQMIDLGLPHIVQNLKAQAWTDEDLLDALNQLEIGLLast
1 -16.400tr|D6RBC6|D6RBC6_HUMAN Uncharacterized protein OS=Homo sapiens GN=RAP1GDS1 PE=4 SV=1  ali   1............................................................................................................................................................................................................MDNLSDTLKKLKITAVDKTEDSLEGCLDCL-LAQNNTETSEKIQASGILQLFASLLTP--QSSCKAKVANIIAEVAKNGEVYLKNFSAGNVFSFTSYLVY--ANSMCGCWIDFTTGAA 116
2 -14.800tr|D6RE95|D6RE95_HUMAN Uncharacterized protein OS=Homo sapiens GN=RAP1GDS1 PE=4 SV=1  ali   2............................................................................................................................................................................................................ADNLSDTLKKLKITAVDKTEDSLEGCLDCL-LAQNNTETSEKIQASGILQLFASLLTP--QSSCKAKVANIIAEVAKNGEVYLKNFSAGNVFSFTSYLVY--ANSMCGCWIDFTTGAA 117
3 -13.600tr|E9PL53|E9PL53_HUMAN Uncharacterized protein OS=Homo sapiens GN=SAAL1 PE=4 SV=1  ali   1..................................................................................................................................................................................................................................MENEICRVWDMSMDEDVALFLQEFNAPDIFMGVLAKSKCPRLREICVGILGNMACFQEICVSISSDKNLGCYCTVC.................... 76
4 -11.500sp|Q6R327|RICTR_HUMAN Rapamycin-insensitive companion of mTOR OS=Homo sapiens GN=RICTOR PE=1 SV=1  ali   8...........................................................................................................................................................................................LYGQLVHHKTGCHLLEVQNIITELCRNVRTPDLDKWEEIKKASLWALGNIGSSNWGLNLLQEENVIPDILKLAKQCEVLSIRGTCVYVLGLIAKTKQGCDILKCHN............................. 115
5 -10.200sp|Q7Z6Z7|HUWE1_HUMAN E3 ubiquitin-protein ligase HUWE1 OS=Homo sapiens GN=HUWE1 PE=1 SV=3  ali   19................................................................................................................................................................................................................VLIRACVSMLGVPVDPDTLHATLRLCLRLTRDHKYAMMFAELKSTRMILNLTQSSGFNGFTPLVTLLLRHIIEDPCTLRHTMEKVV............................ 104
6 -9.270sp|Q96C12|ARMC5_HUMAN Armadillo repeat-containing protein 5 OS=Homo sapiens GN=ARMC5 PE=2 SV=2  ali   13  4..................................................................................................................................................................................................................................EGPALLLLSRFSQAPDPSGALVTGPALYGLLTYVTGAPGPPSPR-ALRILSRLTCNPACLEAFVRSYGAALLRAWL.................... 78
7 -8.920sp|Q96M89|CC138_HUMAN Coiled-coil domain-containing protein 138 OS=Homo sapiens GN=CCDC138 PE=1 SV=1  ali   10  22................................................................................................................................................................................TQADYLAQAFDSLCLDLKTEEGKTLFLEYQAVPVILSHLR----ISSKGLLSNVIDSLLQMTVESKSLQPFLEALFFRTCSVLLRAPKLDQILEKLSIILQKLSKIKSNKKLFELFTIHLMLQEIQRTTNPEHALCINLNSTLFNL 169
8 -8.450sp|O75165|DJC13_HUMAN DnaJ homolog subfamily C member 13 OS=Homo sapiens GN=DNAJC13 PE=1 SV=5  ali   77............................................................................................................................................................................................LRLLLEEDENEESGSIKRSYEFFNELYHRFLLTPKVNMKCLCLQALAIV---GRCHEEIGPFTDTRYIIGMLERCTDKLERDRLILFLNKLILNKKNVKDLMDSNGIRILVDLLT................... 189
9 -8.160sp|Q8NFP9|NBEA_HUMAN Neurobeachin OS=Homo sapiens GN=NBEA PE=1 SV=3  ali   12  2...................................................................................................................................................................................................NPSVPIRNIRMKFAVLIGLIQV-GEVSNRDIVETVLNLLVGGEFDLEMNFIIQDAESITCMTELLEHCDVTCQAEIWSMFTAILRKSVRNLQTSTEVGLIEQV--LLKMSAVDDMIADLLVDMLGVL 125
10 -8.110sp|Q8IZQ1|WDFY3_HUMAN WD repeat and FYVE domain-containing protein 3 OS=Homo sapiens GN=WDFY3 PE=1 SV=2  ali   16  1....................................................................................................................................................................................................................................................AVIIHPGAMLAMLDLLASVGSVDLQLAVANILQSLVHTERNQQVMCEAGLHARLLQRCSAALADEDLHPPLQRMFERL 87

FFAS is supported by the NIH grant R01-GM087218-01
1 4 6 4 7 1   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Wooley JC, Godzik A. Probing metagenomics by rapid cluster analysis of very large datasets. PLoS ONE. 2008;3(10):e3375. Epub 2008 Oct 10.