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Query: PF03400.13; Q32H87_SHIDS/20-150; IS1 transposase, from PfamA32U

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .  130
# Score Template Links and tools%idFirst VIVCAEMDEQWGYVGAKSRQRWLFYAYDRLRKTVVAHVFGERTMATLGRLMSLLSPFDVVIWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLGRKSLSFSKSVELHDKVIGHYLNIKHYQLast
1 -6.760sp|Q9ULL1|PKHG1_HUMAN Pleckstrin homology domain-containing family G member 1 OS=Homo sapiens GN=PLEKHG1 PE=1 SV=2  ali   13  1.....EVDEIWNYIKKNEDK--------ARDRLLAAFPVSKDDDRLHAESTPELSRDVGRSVSTLSLPESQALLTPVKSRAGRASRANCPFEEDLISKEGSFMSLNRLSLASEMPLMD............. 111
2 -5.950sp|Q502W6|VWA3B_HUMAN von Willebrand factor A domain-containing protein 3B OS=Homo sapiens GN=VWA3B PE=2 SV=3  ali   1...................ENWLKTYGLVAKKLTLMDALSVAAVPHSSTYVPVLDKHVVSKVFDEVFPLAHVCNDTNKMTLINPQGAKLNIYKRKVEQAIQSYEKRLNKIVWRALSQEEKEKLDA...... 106
3 -5.490tr|B4DUT6|B4DUT6_HUMAN Uncharacterized protein OS=Homo sapiens GN=DCAF4 PE=2 SV=1  ali   12  19..LKVFMHENLYFTNRKVNSV-CWASLNHLDSHILLCLMGLAETPGCATLL................................................................................ 66
4 -5.070tr|A8MTQ3|A8MTQ3_HUMAN Uncharacterized protein OS=Homo sapiens GN=TFPT PE=4 SV=1  ali   17  6..................................................................................GRRCREIEQVNERVLNRLHQVQRITRRLQQERRFLMRVL.......... 44
5 -5.070tr|C9K020|C9K020_HUMAN Uncharacterized protein OS=Homo sapiens GN=WDR6 PE=4 SV=1  ali   1......MDALEDYVWPRATSELIVTGLECVGDRLLAESGFGFPKCPDYRREPPHPAETKDFLRFKLQDCEGPDVLVYSLDFGGHLRMIKRVQNLLGHYLIHGFRVRPEPNGDLDLEAMVAV.......... 118
6 -5.060sp|Q9C0C6|K1737_HUMAN Uncharacterized protein KIAA1737 OS=Homo sapiens GN=KIAA1737 PE=2 SV=2  ali   20  17.....................................................................................TKELIRQNQATQVELDQLKEQTQLFIEAT................. 45
7 -5.050sp|Q9P2L0|WDR35_HUMAN WD repeat-containing protein 35 OS=Homo sapiens GN=WDR35 PE=1 SV=3  ali   11  5LKIALAVDSFIYFANIRPNYKWGYCS-DRPEYCVVFWKNNEKYVKYVKGLISITTCGDFCILATKADENHPQEENEMETFGATFVLVLCNSIGTPLDPKYIDIVPLFVAMTKTHVIAASKEAFYTWQYR.. 144
8 -5.040sp|P0C1Z6|TFPT_HUMAN TCF3 fusion partner OS=Homo sapiens GN=TFPT PE=1 SV=1  ali   17  6..................................................................................GRRCREIEQVNERVLNRLHQVQRITRRLQQERRFLMRVL.......... 44
9 -4.970sp|Q9BUM1|G6PC3_HUMAN Glucose-6-phosphatase 3 OS=Homo sapiens GN=G6PC3 PE=1 SV=2  ali   18  1...TLGLDLSWSISLAFKRPEWIFASLSRDSGAALGLGIA........................................................................................... 46
10 -4.950sp|Q9ULH0|KDIS_HUMAN Kinase D-interacting substrate of 220 kDa OS=Homo sapiens GN=KIDINS220 PE=1 SV=3  ali   12  12LASWINLTEQWPY-----RTSWLILYLE-ETEGIPDQMTLKTIYERISKNIPTTKDVEPLLEIDGDIRNFEVFLSSRTPVLVARDVKVFLPCTVNLDPKLREIIADVRAAREQISI............... 121

FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 1 0 5   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Godzik A. cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences. Bioinformatics. 2006 May 26;