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Query: PF08045.11; E9DYC2_METAQ/1-287; Cell division control protein 14, SIN component, from PfamA32U

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MEALLSLAFDNLSSYDGPKVRKGLRQVEGLLAQICLSDGRAAAQRRQSCVDGEADAPLSPPRKDLGELSQDPAFREFFKLQEGFEWNVAMRLIRTLDRLMAKGSDGQNDLLILSALDLIQGVLLLHPPSKTLFSREQNMNLLLDLLEPFNCPAIQSATLLTLVVALIDTPSNTRTFEGLDGLLTVTSLFKSRSTSREVKLKLVEFLYCYLMPETPSIPRADQRDSVPAMLQRSPSKLAGAFNAESRRKRAGSSGLVTLTTEEKQELLSRHLSSVEDLVKDLKNCAPFLast
1 -11.700sp|Q99698|LYST_HUMAN Lysosomal-trafficking regulator OS=Homo sapiens GN=LYST PE=1 SV=3  ali   13  14...............................................................................................................IQGILHEIGGTGIF-------------VFLFARVVELSSCEETQALALRVILSLIKYNQQRVHELENCNGLSMIHQVLIKQKC---VGFYILKTLLEGCCGEDIIYMNENGEFKLDVDSNAIIQDVKLLEE-----------------SKAEQGVWETLLAALEVLIRADHHQQMF 165
2 -11.500tr|D6RBC6|D6RBC6_HUMAN Uncharacterized protein OS=Homo sapiens GN=RAP1GDS1 PE=4 SV=1  ali   14  4...........................................................................................LSDTLKKLKITAVDKTEDSLEGCLDCLLQALAQNNTETSEKIQASGILQLFASLLTPQ--SSCKAKVANIIA--VAKNGEVYLKNFSAGNVFSFTSYLVYANSM............................................................................................ 104
3 -10.700tr|D6RE95|D6RE95_HUMAN Uncharacterized protein OS=Homo sapiens GN=RAP1GDS1 PE=4 SV=1  ali   12  5...........................................................................................LSDTLKKLKITAVDKTEDSLEGCLDCLLQALAQNNTETSEKIQASGILQLFASLL--TPQSSCKAKVANIIA--VAKNGEVYLKNFSAGNVFSFTSYLVYAN--SMCGCWIDFTT................................................................................. 114
4 -10.600sp|Q9UPU5|UBP24_HUMAN Ubiquitin carboxyl-terminal hydrolase 24 OS=Homo sapiens GN=USP24 PE=1 SV=3  ali   16  12........................................................................................................STKDSLIAGEALSLLVTCLQLRSQQLASFYNLPCVDFIIDILLGSPSAEIRRVACDQLYTLSQTDTSAHPDVQKP--LGVILTAQIMRGVNQRLLSQCMEYLRCQLLDDLTTSEMEQLRISPATMLEDEITWLDNFEPNRTAEC---------ETSEADNILLAGHLRLIKTLLSLCGAEKEM 198
5 -10.400sp|P50851|LRBA_HUMAN Lipopolysaccharide-responsive and beige-like anchor protein OS=Homo sapiens GN=LRBA PE=1 SV=4  ali   13  42.................................................................................................................................QSAMHSIGGVQVLFPLFADEIDLTICSTLLAFIMELLKNSIAMQEQMLACKGFLVIGYSLEKSS-KSHVSRAVLELCLAFS............................................................................. 130
6 -10.300sp|Q99698|LYST_HUMAN Lysosomal-trafficking regulator OS=Homo sapiens GN=LYST PE=1 SV=3  ali   19  10..................................................................................................................LYELLSGVLLILPDVLDVMDKLIQADTLLVLVN-HPSPAIQQGVIKLLDAYFARASKEQKKFLKNRGFSLLANQLYLHRGTQELLECFIEMFF................................................................................ 104
7 -9.790sp|Q99698|LYST_HUMAN Lysosomal-trafficking regulator OS=Homo sapiens GN=LYST PE=1 SV=3  ali   13  16.............................................................................................DALKAYQNFVFEEDRLHSIQIANHICNLIQKGNIVVQWKLYNYIFNPVLQRGVELAHHCQVLQIYVKTLPILL-KSRVIRDLFLSCNGVSQIIELNCLNGIRSHS-LKAFETLIISL............................................................................. 152
8 -9.740sp|Q69YN4|VIR_HUMAN Protein virilizer homolog OS=Homo sapiens GN=KIAA1429 PE=1 SV=2  ali   15  71...............................................................................................................LKAGTKLVSSLAECGAQGVTGLLQAGVISGLFELLFADHSSSLKLNAFKALDSVI-SMTEGMEAFNEKSGYQKLLELILLDQTVRVVKCHFYEVLSEI.............................................................................. 181
9 -9.290sp|Q6PJG6|BRAT1_HUMAN BRCA1-associated ATM activator 1 OS=Homo sapiens GN=BRAT1 PE=1 SV=2  ali   16  25.................................................................DDTCLEKLLDWFKTVTEGESSVVLLQEHPCLVELLSHVLKVQDLSSGVLSFSLLAGTFAAQENCFQYLQQGELLPGLFGEPGPLAVPTVRSGWIQGLRSLA-QHPSALRFLADHGAVDTIFSLQGDSSL---VASAASQLLVHVL............................................................................. 172
10 -8.910sp|A5D8W1|CG063_HUMAN Uncharacterized protein C7orf63 OS=Homo sapiens GN=C7orf63 PE=2 SV=3  ali   25  5...........................................................................................................YNVLLFSTLDSIWCCILGCYPSEDYFLEKEGIFLLLDLLALNQ-KKFCNLILGIMV--FCDNPKTAAHVNAWQGASLLIKLWRKEEKELGVK........................................................................................ 100

FFAS is supported by the NIH grant R01-GM087218-01
1 4 7 6 0 7   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Pio F, Pawlowski K, Godzik A. Saturated BLAST: an automated multiple intermediate sequence search used to detect distant homology. Bioinformatics. 2000 Dec;16(12):1105-10.