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Query: PF10752.9; D3FXJ5_BACPE/1-83; Protein of unknown function (DUF2533 topsan), from PfamA32U

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80
# Score Template Links and tools%idFirst MSVHLQIAEQVTNHRRAQKEFLALDEKREAAIDRVVEDAKKGLHISLNEVNAITKEMNQIAQDFYFPPRKEVTTDMVREYINKLast
1 -6.340sp|Q5THJ4|VP13D_HUMAN Vacuolar protein sorting-associated protein 13D OS=Homo sapiens GN=VPS13D PE=1 SV=1  ali   8  19.....................IKLSVFTSNKLPLDLKALKSTLGFPLIRFEDAVINLDPFTRVHPYETKEFIINDILKHFQEE 80
2 -5.220sp|Q6ZQQ6|WDR87_HUMAN WD repeat-containing protein 87 OS=Homo sapiens GN=WDR87 PE=2 SV=3  ali   9  25.........................................GEPYRSERAQQISIAHKEMEMQYFYPATRDI........... 55
3 -5.160sp|P55082|MFAP3_HUMAN Microfibril-associated glycoprotein 3 OS=Homo sapiens GN=MFAP3 PE=2 SV=1  ali   14  3......MSSHLRKTEKAINEFFRTEGQKAFEIAKRIPIITSAKTLELAKVTEFARYIEELARSVPLPPLILNCRAFVEEMFE. 87
4 -5.140sp|Q9HCX4|TRPC7_HUMAN Short transient receptor potential channel 7 OS=Homo sapiens GN=TRPC7 PE=1 SV=1  ali   7  1..................NDYRKLSMQCKDFVVGVLDLCRDTEEVEA---DHHRPSLSRIKLAIKYEVKKFVAHPNCQQQLLT 74
5 -5.070sp|Q9Y210|TRPC6_HUMAN Short transient receptor potential channel 6 OS=Homo sapiens GN=TRPC6 PE=1 SV=1  ali   4  1..................NDYKKLSMQCKDFVVGLLDLCRNTEEVEA---DHGRPNLSRLKLAIKYEVKKFVAHPNCQQQLLS 74
6 -5.070tr|E9PJN4|E9PJN4_HUMAN Uncharacterized protein OS=Homo sapiens GN=TRPC6 PE=4 SV=1  ali   4  1..................NDYKKLSMQCKDFVVGLLDLCRNTEEVEA---DHGRPNLSRLKLAIKYEVKKFVAHPNCQQQLLS 74
7 -5.040sp|Q9UBN4|TRPC4_HUMAN Short transient receptor potential channel 4 OS=Homo sapiens GN=TRPC4 PE=1 SV=1  ali   4  1..................SEYEELSRQCKQFAKDLLDQTRSSRELEI---EQSGNDLARLKLAIKYRQKEFVAQPNCQQLLAS 74
8 -4.850sp|Q7Z3V4|UBE3B_HUMAN Ubiquitin-protein ligase E3B OS=Homo sapiens GN=UBE3B PE=1 SV=3  ali   15  91.......TEESKQLLAMLMLFCDCSRHLITILDDI-EVYEEQISFKLEELVTISSFLNSFV...................... 143
9 -4.840sp|P48995|TRPC1_HUMAN Short transient receptor potential channel 1 OS=Homo sapiens GN=TRPC1 PE=1 SV=1  ali   6  1..................NDYEELARQCKMFAKDLLAQARNSRELEVRGLLEERMNLSRLKLAIKYNQKEFVSQSNCQQFLNT 78
10 -4.750sp|Q13507|TRPC3_HUMAN Short transient receptor potential channel 3 OS=Homo sapiens GN=TRPC3 PE=1 SV=3  ali   9  1..................NDYRKLSMQCKDFVVGVLDLCRDSEEVEALEVHRHKASLSRVKLAIKYEVKKFVAHPNCQQQLLT 76
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 0 9 1   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Plewczynski D, Rychlewski L, Ye Y, Jaroszewski L, Godzik A. Integrated web service for improving alignment quality based on segments comparison. BMC Bioinformatics. 2004 Jul 22;5(1):98.