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Query: PF11944.8; Y2971_PHOPR/1-125; Protein of unknown function (DUF3461 topsan), from PfamA32U

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .
# Score Template Links and tools%idFirst MYPHLTSIGIEQPEAIERYSLRQEAANDILKVYFAKNKGELFAKSVKFKFPRQRKSVLVNSGSREYKEITEINRTLTHIIDELDIITKRKHTEVDIKKKILGDLRHLERVVSHKISEIEADLEKLLast
1 -6.870sp|Q9BVI0|PHF20_HUMAN PHD finger protein 20 OS=Homo sapiens GN=PHF20 PE=1 SV=2  ali   25  1..............................................................................................QWQFNLLTHVESLQDEVTHRMDSIEKELDVL 31
2 -6.690sp|A8MW92|P20L1_HUMAN PHD finger protein 20-like protein 1 OS=Homo sapiens GN=PHF20L1 PE=1 SV=2  ali   17  2................................................................................................QLNLLTHIENVQNEVTSRMDLIEKEVDVL 30
3 -6.400sp|Q9Y4P9|SPEF1_HUMAN Sperm flagellar protein 1 OS=Homo sapiens GN=SPEF1 PE=1 SV=3  ali   15  1.................................................................YNRALQGDPSFVLQIAEKEQELLASQETVQVLQMKVRRLEHLLQLKNVRIEDLSRRLQQ. 59
4 -6.260sp|Q12766|HMGX3_HUMAN HMG domain-containing protein 3 OS=Homo sapiens GN=HMGXB3 PE=2 SV=2  ali   15  4...........KPDMFPPYKYSCTVTLD-LGLATSRGRGKCKNPSCSYVYTNRHKP..................................................................... 47
5 -5.520sp|Q8ND30|LIPB2_HUMAN Liprin-beta-2 OS=Homo sapiens GN=PPFIBP2 PE=2 SV=3  ali   14  2....................................................................ASDASHALEAALEQMDGIIAGTKTGADLSDGTCE....................... 35
6 -5.480sp|Q6IS24|GLTL3_HUMAN Putative polypeptide N-acetylgalactosaminyltransferase-like protein 3 OS=Homo sapiens GN=WBSCR17 PE=2 SV=2  ali   23  26........................................................................................SAHSASPIQDAVLKRLSLLEDIVYRQLNGLSKSL... 59
7 -5.420sp|Q86UD1|OAF_HUMAN Out at first protein homolog OS=Homo sapiens GN=OAF PE=2 SV=1  ali   22  15..............QVTEESLQADSDADSISLELRKPDGTLVSFTADFK............................................................................ 49
8 -5.250sp|Q9Y238|DLEC1_HUMAN Deleted in lung and esophageal cancer protein 1 OS=Homo sapiens GN=DLEC1 PE=2 SV=2  ali   17  1....................................................................TQDISHLLTGVFRNLASLIKARGSENERHEEFVDQLQQIRELYKQRLDEFE...... 62
9 -5.160sp|O15344|TRI18_HUMAN Midline-1 OS=Homo sapiens GN=MID1 PE=1 SV=1  ali   10  1...........................................................................LETLLAKLIQTCQHEVNASRQEAKLTEECDLLIEIIQQRRQIIGTKIKE. 50
10 -5.010sp|Q9UPR0|PLCL2_HUMAN Inactive phospholipase C-like protein 2 OS=Homo sapiens GN=PLCL2 PE=1 SV=2  ali   1......TLWIKTVDEVFKNAQPPIRDATDLRENMQNAVVSFVSPRFLGPDNTPLVVLNLSEQYPTMELQGIVPEVLKKIVTTYDMMIQSLKALIENADAVYEKIVHCQKAAMEFHEHLHSIGTK. 136

FFAS is supported by the NIH grant R01-GM087218-01
1 3 9 5 6 0   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Ye Y, Godzik A. Comparative analysis of protein domain organization. Genome Res. 2004 Mar;14(3):343-53.