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Query: PF12574.8; A0A0F3MK43_9RICK/404-636; 120 KDa Rickettsia surface antigen, from PfamA32U

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst ILEDESFKKWQEQNQNKTLDDFKHSAAQMDNLTPETKELISKLGAAGYANILGSGANIEQAQEMSFAASFCTLDWATQSNAVGNTTRKTITNEAGEKVVDLVSHSHSVQLSASVNGATKTITKCRTIDIPSTVEKGPLDLALVAQDSTGKNMPESKAVYFTVHYDQDGKIVEMTHPEPLKFFSETPSSPAYTVINGEIFTLPITKEKYEQLHKEISQNMEEQYAKDHQLAADKLast
1 -6.640sp|O15230|LAMA5_HUMAN Laminin subunit alpha-5 OS=Homo sapiens GN=LAMA5 PE=1 SV=8  ali   7.....................................................................................................SDVDVQLQVAVPQPGRYALVVEYAN-------EDARQEVGVAVHTPQRAPQQGLLSLHPGTARDTQDHLAVFHLDSEASVRLTAEQARFFLHG---VTLVPIEEFSPEFVEPRV.................. 118
2 -6.090sp|Q13425|SNTB2_HUMAN Beta-2-syntrophin OS=Homo sapiens GN=SNTB2 PE=1 SV=1  ali   16  19.............................................................................................NGQEVRLTIHYENGFTISRENGGSSSILYRYPFERLKMSADDGIRNLYLDFGGPEGELHSCPKPIVFVLHTFLSAKVTRMG........................................................... 103
3 -5.620sp|Q16787|LAMA3_HUMAN Laminin subunit alpha-3 OS=Homo sapiens GN=LAMA3 PE=1 SV=2  ali   9.....................................................................................................REVELHLRLRIPQVGHYVVVVEYST-------AAQLFVVDVNVKSSGSVLAGQVNIYSCSAVIDHMSRIAMYELLADADIQLKGHMARFLLHQ---VCIIPIEEFSAEYVRPQV.................. 120
4 -5.230sp|Q16787|LAMA3_HUMAN Laminin subunit alpha-3 OS=Homo sapiens GN=LAMA3 PE=1 SV=2  ali   10  1......................................................................................................QNQVTLRGRVPHLGRYVFVIHFYQ-------AHPTFPAQVSV---DGGWPRAGSFHASFCPHVLGCRDQVIAEGQIEFDISEPEVAATVKVPEGKVLVVPAENYDYQILHKK................... 109
5 -5.100sp|Q96MK3|FA20A_HUMAN Protein FAM20A OS=Homo sapiens GN=FAM20A PE=2 SV=4  ali   15  13....................................................................................INRHGLYSRSSPVVSKLLQDMRHFPT-ISADYSQDEKALLGACDCTQIVKPSGVHLKLVLRFSDFGK-----AMFKPMRQQRD----EETPVDFFYFIDFQRHNAEIAAFH-DFRRVPPTVGRIVNVTKEILEVTKNEI.......... 145
6 -5.030sp|Q13424|SNTA1_HUMAN Alpha-1-syntrophin OS=Homo sapiens GN=SNTA1 PE=1 SV=1  ali   12  19.................................................................................NGRPCSLSVHIDKGFTLWAAEPGAARAVL------------RQPFEKLQMSSDDGASLLFLDFGGAEGELHSCPKTIVFIIHSFLSAKVTRLG........................................................... 104
7 -5.030sp|O15230|LAMA5_HUMAN Laminin subunit alpha-5 OS=Homo sapiens GN=LAMA5 PE=1 SV=8  ali   13  8.............................................RGYAQMAPVQPRIVARLNLTSPDLFWLV-YVNRGAMSVSGRVSVREEGRSATCANCTAQSQPVAFPPSTEPAFITVPQ-RGFGEPFVLNPGTWALRV-----EAEGVLLDYVVLLPSAYYEAALLQLVTEA......................................................... 134
8 -4.990sp|Q13884|SNTB1_HUMAN Beta-1-syntrophin OS=Homo sapiens GN=SNTB1 PE=1 SV=3  ali   19  36..................................................................................................................GAFPKTIIQSPYEKLKMSSDDGIRMLYLDFGGKDGELHSCPKPIVFIIHSFLSAKITRLGL.......................................................... 100
9 -4.760sp|Q15048|LRC14_HUMAN Leucine-rich repeat-containing protein 14 OS=Homo sapiens GN=LRRC14 PE=2 SV=1  ali   22  5........................................................................................................................................................................ELRTVVHPFPVDCYEGLPWPPP----ASVLLEASINEEKFARVEAELHQ................ 49
10 -4.630tr|D6RB01|D6RB01_HUMAN Uncharacterized protein OS=Homo sapiens GN=FAM169A PE=4 SV=1  ali   13  10...................................................................................NCSHEELENSAEDYMSDLRCGDPENPECFSLLNITIPISLSNVGFVPLYGGDQTQKILALFAPEDSLTA----ALYLADQWWAIDDIVKTSVPSREGLKQ--------VSTLGERVVLYV----LNRIIYRKQEMERNEIPFLCHSSTD. 143

FFAS is supported by the NIH grant R01-GM087218-01
1 4 6 4 7 1   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Wooley JC, Godzik A. Probing metagenomics by rapid cluster analysis of very large datasets. PLoS ONE. 2008;3(10):e3375. Epub 2008 Oct 10.