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Query: PF15029.6; H0VXD9_CAVPO/9-242; Transmembrane protein 174, from PfamA32U

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst DDFSLNVFSLTPYTPSTADIQVSDDDKAGATLLFSGIFLGLVGITFTVMGWIKYQSVSHFEWTQLLGPILLSVGVTFILIAVCKFKMLSCQLCKESEERVPDSEQTSGGQSFVFTGINQPITFHGATVVQYIPPPYGSQEPMAMNTAYLQSMVNPCGLLPSGGAAGAMPSPPQYCTICPQDNAAFVESEDYSSITDGRNSRSSLGADRLGEMQLEEEDYARFSSPPPYEEIYALLast
1 -43.700sp|Q8WUU8|TM174_HUMAN Transmembrane protein 174 OS=Homo sapiens GN=TMEM174 PE=2 SV=1  ali   80  1..............................................................................................................SFVFTGINQPITFHGATVVQYIPPPYGSPEPMGINTSYLQSVVSPCGLITSGGAAAAMSSPPQYYTIYPQDNSAFVVDEG............................................ 80
2 -6.180sp|Q5T1H1|EYS_HUMAN Protein eyes shut homolog OS=Homo sapiens GN=EYS PE=1 SV=5  ali   16  11.............................LMVFHSSFINGKTCRRQLVEEWHPQPSSYVVNWT--ICPLQIQLGDILVISSVSETSFVGCVQNTTTEDQLLFGCRLKG.............................................................................................................................. 132
3 -5.100sp|Q9Y561|LRP12_HUMAN Low-density lipoprotein receptor-related protein 12 OS=Homo sapiens GN=LRP12 PE=1 SV=1  ali   13  1..............................................................AAVIG---LICGLLLVIALGCTCKLYSL---RMFERRSFETQLSRVEAELLRR--EAPPSYGQLIAQGLIPPVEDFPVCSPNQASVLENLRLAVRSQLGFTS...................................................................... 95
4 -5.040sp|Q5W0Q7|USPL1_HUMAN Ubiquitin-specific peptidase-like protein 1 OS=Homo sapiens GN=USPL1 PE=2 SV=1  ali   18  1.....................MMDSPKIGNGLPVIGPGTDIGISSLHMVGYLGKNFDSAKVPSDEYCPACREKGKLKALIFLCE----QC................................................................................................................................................ 77
5 -5.020sp|A7E2V4|K0913_HUMAN Zinc finger SWIM domain-containing protein KIAA0913 OS=Homo sapiens GN=KIAA0913 PE=1 SV=1  ali   15  1......................GGHQGPHRNLHLCAFEIGLYALGLHSPNWLSRTYSSHVSWMEIGSAALTILVECW-MVRAAAELALSCLPCKEQDNLMLEKACMAVEEAAKGGGVYPEVLFEVAHQWFWL...................................................................................................... 156
6 -5.010sp|Q15303|ERBB4_HUMAN Receptor tyrosine-protein kinase erbB-4 OS=Homo sapiens GN=ERBB4 PE=1 SV=1  ali   52...................................................................................................................................................................................LQHPDYLQEYSTKYFYKQNGRIRPIVAENPEYLSEFSLKPGTVLPPPPYRH.... 102
7 -4.940sp|Q8WVM7|STAG1_HUMAN Cohesin subunit SA-1 OS=Homo sapiens GN=STAG1 PE=1 SV=3  ali   15  1..................NGHPQQNGEGEPVTLFEVVKLGKSAMQSVVDDWIEYKQDRDIALLDLINFFIQCSGCRGTVRI......................................................................................................................................................... 64
8 -4.850sp|Q15042|RB3GP_HUMAN Rab3 GTPase-activating protein catalytic subunit OS=Homo sapiens GN=RAB3GAP1 PE=1 SV=3  ali   18  3..............................ALCLCMINFYHGGLKGVAHLWQEFVLEMRFRWEN--NFLIPGLASGPPDLRCCKLQMLNC................................................................................................................................................ 64
9 -4.850sp|Q4ADV7|RIC1_HUMAN Protein RIC1 homolog OS=Homo sapiens GN=KIAA1432 PE=1 SV=2  ali   7.....................................................FMEAGCLDWCIVIGLILRESSIINQILVITQSSEVDGEMLQNIKTGLHAVDRWASTDCPGYKPFLNIIKPQLQKLSEIT...................................................................................................... 85
10 -4.790tr|E9PEZ4|E9PEZ4_HUMAN Uncharacterized protein OS=Homo sapiens PE=4 SV=1  ali   23  6................................ALSCTATPLFSWCFTATGQTRVTVVGPPMAKQWLLLMFHCVGSQ-------------------------DSKCHARGLKMLERVRSQPLTNDDLVTSVSLPP.................................................................................................... 82

FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Schwarzenbacher R, Godzik A, Jaroszewski L. The JCSG MR pipeline: optimized alignments, multiple models and parallel searches. Acta Crystallogr D Biol Crystallogr. 2008 Jan;64(Pt 1):133-40. Epub 2007 Dec 5.