current user: public
If you have questions about the server, please let us know.

Query: PF16311.5; H2L5R6_ORYLA/1-133; Transmembrane protein 100, from PfamA32U

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .  130
# Score Template Links and tools%idFirst MPEEVNKDAMRTPSTSDKATNSERPAATATAVNIPLVNEVQLTAATGGAELSCYRCTIPFGVVVLIAGIVVTVVAYSFNSHGSTISYFGLVLLSAGLLLLASSAICWKVKLERKKERRRESQTVLVTNQRSIFLast
1 -6.460sp|P15822|ZEP1_HUMAN Zinc finger protein 40 OS=Homo sapiens GN=HIVEP1 PE=1 SV=3  ali   31  1.............................................AGVAELSSVVPCIPIGQIRVIVGLANTNMAPQVHPPGLALNAVGLQV......................................... 70
2 -6.030sp|Q5RHP9|CA173_HUMAN Uncharacterized protein C1orf173 OS=Homo sapiens GN=C1orf173 PE=2 SV=1  ali   19  61.........................................................FPFSLTFFLNGMQVNRLSSCCEYKHRKGSRLGGKRGYFGFVCVERSSPCYKC........................ 112
3 -5.850sp|O75592|MYCB2_HUMAN Probable E3 ubiquitin-protein ligase MYCBP2 OS=Homo sapiens GN=MYCBP2 PE=1 SV=3  ali   30  1.......................................................CEHPLSDIV-IAGEAAHPLPHTFHRLLQTISDL-MMSLPSGSSLQQMALRCW.......................... 50
4 -5.440sp|Q9GZV3|SC5A7_HUMAN High affinity choline transporter 1 OS=Homo sapiens GN=SLC5A7 PE=2 SV=1  ali   15  15........................................................KFPFKTLAMVTSFLTNIC----------ISYLAKYLFESGT--LPPKLDVFDAVVARHSEENMDKTILVKNENIKL. 78
5 -5.250sp|Q96DZ1|ERLEC_HUMAN Endoplasmic reticulum lectin 1 OS=Homo sapiens GN=ERLEC1 PE=1 SV=1  ali   15  17........................TEFSLPTTGVLYKEDNYVIMTTAHKEK--YKCILP.......................................................................... 49
6 -5.140sp|Q86UP3|ZFHX4_HUMAN Zinc finger homeobox protein 4 OS=Homo sapiens GN=ZFHX4 PE=1 SV=1  ali   25  10....................................................CFLCKLSF-------GYIRSFVTHAVHDHRMTLNDEEQKLLSNK----CVSAIIQGIGKDKE................... 60
7 -4.840sp|Q8N5J2|FA63A_HUMAN Protein FAM63A OS=Homo sapiens GN=FAM63A PE=1 SV=2  ali   25  26........................................................LTYHGLCELTAAAKEGELSVFFNNHFSTMTKHKLYLLVTDQGFLQEEQVVWE......................... 80
8 -4.710sp|Q8NBR6|FA63B_HUMAN Protein FAM63B OS=Homo sapiens GN=FAM63B PE=1 SV=2  ali   23  26........................................................LTYHGLCELTSTVQEGELCVFFNNHFSTMT--QLYLLVTDQGFLTEEKVVWE......................... 80
9 -4.700tr|E9PPE3|E9PPE3_HUMAN Uncharacterized protein OS=Homo sapiens GN=ABCG4 PE=4 SV=1  ali   9  3......................................................STLTQFCILRTFLSILRDTVRRQAGGEEAGTGLTFWAVGSQQLKWEWGPSL............................ 55
10 -4.600sp|Q504Y0|S39AC_HUMAN Zinc transporter ZIP12 OS=Homo sapiens GN=SLC39A12 PE=2 SV=3  ali   17  21...................................LLEKTGCPRRRNGMQGDCNLCFEPDALLLIAGGNFEDQLR------EEVVQRVSLLLL---YYIIHQEEIC........................... 82
FFAS is supported by the NIH grant R01-GM087218-01
1 4 7 2 5 8   jobs submitted since Jan 1, 2011
Comments and questions to: webmaster
Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Pawlowski K, Pio F, Chu Z, Reed JC, Godzik A. PAAD - a new protein domain associated with apoptosis, cancer and autoimmune diseases. Trends Biochem Sci. 2001 Feb;26(2):85-7.