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Query: PF01128.19; ISPD_ECOLI/8-229; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, from PfamA32U

Results of FFAS03 search in PDB1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst VCAVVPAAGFGRRMQTECPKQYLSIGNQTILEHSVHALLAHPRVKRVVIAISPGDSRFAQLPLANHPQITVVDGGDERADSVLAGLKAAGDAQWVLVHDAARPCLHQDDLARLLALSETSRTGGILAAPVRDTMKRAEPGKNAIAHTVDRNGLWHALTPQFFPRELLHDCLTRALNEGATITDEASALEYCGFHPQLVEGRADNIKVTRPEDLALAEFYLTRLast
1 -114.0001vgt_A mol:protein length:238 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase  ali model follow..  100  10VCAVVPAAGFGRRMQTECPKQYLSIGNQTILEHSVHALLAHPRVKRVVIAISPGDSRFAQLPLANHPQITVVDGGDERADSVLAGLKAAGDAQWVLVHDAARPCLHQDDLARLLALSETSRTGGILAAPVRDTMKRAEPGKNAIAHTVDRNGLWHALTPQFFPRELLHDCLTRALNEGATITDEASALEYCGFHPQLVEGRADNIKVTRPEDLALAEFYLTR 231
2 -105.0004ys8_A mol:protein length:241 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase  ali model follow..  40  10LFALIPCAGTGSRSGSALPKQYRTLAGRALLHYTLAAFDACSEFAQTLVVISPDDAHFDARRFAGLRFAVRRCGGASRQASVMNGLIQLADADWVLVHDAARPGITPALIRTLIGALKDDPVGGIVALPVADTLKRVPAGGDAIERTESRNGLWQAQTPQMFRIGMLRDAIQRAQLEGRDLTDEASAIEWAGHTPRVVQGSLRNFKVTYPEDFDLAEAILAH 236
3 -100.0001vgz_A mol:protein length:241 4-diphosphocytidyl-2C-methyl-D-erythritol synthase  ali model follow..  41  7NIALIPAAGIGVRFGADKPKQYVEIGSKTVLEHVLGIFERHEAVDLTVVVVSPEDTFADKVQTAFPQVRVWKNGGQTRAETVRNGVAKLAETDNILVHDAARCCLPSEALARLIEQAGNAAEGGILAVPVADTLKRAES--GQISATVDRSGLWQAQTPQLFQAGLLHRALAAENLGG--ITDEASAVEKLGVRPLLIQGDARNLKLTQPQDAYIVRLLLDA 230
4 -98.9001w77_A mol:protein length:228 2C-METHYL-D-ERYTHRITOL 4-PHOSPHATE CYTIDYLYLTRANSFERASE  ali model follow..  31  5VSVILLAGGQGKRMKMSMPKQYIPLLGQPIALYSFFTFSRMPEVKEIVVVCDPFFRDIFEEYEESDVDLRFAIPGKERQDSVYSGLQEIDNSELVCIHDSARPLVNTEDVEKVLKDGSAV-GAAVLGVPAKATIKEVNS-DSLVVKTLDRKTLWEMQTPQVIKPELLKKGFELVKSEGLEVTDDVSIVEYLKHPVYVSQGSYTNIKVTTPDDLLLAERILSE 226
5 -98.4002xwl_A mol:protein length:223 2-C-METHYL-D-ERYTHRITOL 4-PHOSPHATE CYTIDYLYLTRANSFERASE  ali model follow..  36  3TVAVVPAAGSGERLRAGRPKAFVTLGGTPLLEHALSGLRASGVIDRIVIAVPPALTDESKLVFGG-EDSVIVSGGVDRTESVALALEAAGDAEFVLVHDAARALTPPALIARVVAALKEGHSAVVPGLAPADTIKAVDA-NGAVLGTPERAGLRAVQTPQGFHADVLRRAYARATAGG--VTDDASLVEQLGTPVQIVDGDPLAFKITTPLDLVLAEAVLA. 219
6 -96.7005ddt_A mol:protein length:232 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase  ali model follow..  34  3YDVVIPAAGQGKRMKAGRNKLFIELKGDPVIIHTLRVFDSHRQCDKIILVINEQEREHFQQLLSDYTSIELVAGGDERQHSVYKGLKAVKQEKIVLVHDGARPFIKHEQIDELIAEAEQT-GAAILAVPVKDTIKRVQ--DLQVSETIERSSLWAVQTPQAFRLSLLMKAHAEAERKGFLGTDDASLVEQMGGSVRVVEGSYTNIKLTTPDDLTSAEAIMES 225
7 -96.0003q7u_A mol:protein length:231 2-C-methyl-D-erythritol 4-phosphate cytidyltransferase  ali model follow..  32  8VVAIVPAAGSGERLAVGVPKAFYQLDGQTLIERAVDGLLDSGVVDTVVVAVPADRTDEARQILG--HRAMIVAGGSNRTDTVNLALTVLSEPEFVLVHDAARALTPPALVARVVEALRDGYAAVVPVLPLSDTIKAVDA-NGVVLGTPERAGLRAVQTPQGFTTDLLLRSYQRGSLDAAEYTDDASLVEHIGGQVQVVDGDPLAFKITTKLDLLLAQAIVR. 230
8 -95.4002xwn_A mol:protein length:233 2-C-METHYL-D-ERYTHRITOL 4-PHOSPHATE CYTIDYLYLTRANSFERASE  ali model follow..  32  8VVAIVPAAGSGERLAVGVPKAFYQLDGQTLIERAVDGLLDSGVVDTVVVAVPADRTDEARQILG--HRAMIVAGGSNRTDTVNLALTVLSEPEFVLVHDAARALTPPALVARVVEALRDGYAAVVPVLPLSDTIKAVDA-NGVVLGTPERAGLRAVQTPQGFTTDLLLRSYQRGSLDAAEYTDDASLVEHIGGQVQVVDGDPLAFKITTKLDLLLAQAIV.. 229
9 -94.1004myb_A mol:protein length:261 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase  ali model follow..  35  4KYVIIPAAGIGTRMQLDIPKQYYKLNGKTILDNTLVKFIDNPLFDKIFVAIAASDNFWNNSLYYNHDKIVVCNGGETRFNSVYNALNVIDNDDWVFVHDAARPCVSIDSIIDLYEQTKSSHQAGILAVRAYETVKQVT--KNIVVKTLARDNIWLAQTPQLSRLGQLEKAFDFCYSNNLKVTDEASALEMFGINPIVVECSKKNIKITTKDDLEYANWQLGK 230
10 -93.2004kt7_A mol:protein length:237 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase  ali model follow..  26  10ISAIITAAGSGLRMRSKINKPYIEVGGRKVLEITLDTVSRVKEIDEIILVIRKDDEDIIKDILEKYGNIRYVYGSTTRELSTFEGLKALDQSELVLTHDGVRPFASEELFLKTINALRKN-KAVITATKSKDTVKIIDD-DMYVDFTPNRDYVYNIQTPQAFDKKLIYAMYEKYLASEFKVTDDSQLFEFFDEKVKVVHGEYSNIKITTQEDIIFANAYLQR 233
11 -89.8001vpa_A mol:protein length:234 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase  ali model follow..  29  8NVAILLAAGKGERMSENVPKQFLEIEGRMLFEYPLSTFLKSEAIDGVVIVTRREWFEVVEKRVFHEKVLGIVEGGDTRSQSVRSALEFLESPSYVLVHDSARPFLRKKHVSEVLRRARET-GAATLALKNSDALVRVEND---RIEYIPRKGVYRILTPQAFSYEILKKAHENGGE----WADDTEPVQKLGVKIALVEGDPLCFKVTFKEDLELARIIARE 223
12 -89.1004jis_A mol:protein length:247 ribitol-5-phosphate cytidylyltransferase  ali model follow..  26  4IYAEILAGGKGSRMGNNMPKQFLPLNKRPIIIHTVEKFLLNDRFDKILIVSPKEWINHTKDILKKFDRLVVVEGGSDRNESIMSGIRYIEDNDVIITHDSVRPFLTHRIIDENIDAVLQ-YGAVDTVISAIDTIIASEDQ-EFISDIPVRDNMYQGQTPQSFRISKLVELYNKLSDEQAVLTDACKICSLAGEKVKLVRGEVFNIKVTTPYDLKVANAILQE 235
13 -89.1003f1c_A mol:protein length:246 Putative 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2  ali model follow..  23  4IYAQILAGGKGTRMGNSMPKQFLPLNGKPIIVHTVEKFILNTRFDKILISSPKEWMNHAEDNIKKYDRIVVIEGGEDRNETIMNGIRFVEDDDIIVTHDAVRPFLTHRIIEENIDAALE-TGAVDTVIEALDTIVESSNH-EVITDIPVRDHMYQGQTPQSFNMKKVFNHYQNLTPEKQILTDACKICLLAGDDVKLVKGEIFNIKITTPYDLKVANAIIQE 234
14 -88.4002px7_A mol:protein length:236 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase  ali model follow..  34  16VSVLIPAAGNGLRLGRG-PKAFLQVGGRTLLEWTLAAFRD---AAEVLVALPPGAEPPKG------LGAVFLEGGATRQASVARLLEAA-SLPLVLVHDVARPFVSRGLVARVLEAAQRS-GAAVPVLPVPDTLMAPEGE--AYGRVVPREAFRLVQTPQGFFTALLREAHAYARRKGLEASDDAQLVQALGYPVALVEGEATAFKITHPQDLVLAEALARV 223
15 -87.8002vsh_A mol:protein length:236 2-C-METHYL-D-ERYTHRITOL 4-PHOSPHATE CYTIDYLYLTRANSFERASE  ali model follow..  23  3IYAGILAGGTGTRMGSNLPKQFLELGDRPILIHTIEKFVLEPSIEKIVVGVHGDWVSHAEDLVDKYERIIITKGGADRNTSIKNIIEAIDPEDIVVTHDSVRPFITLRMIQDNIQLAQN-HDAVDTVVEAVDTIVESTNG-QFITDIPNRAHLYQGQTPQTFRCKDFMDLYGSLSDEEEILTDACKIFVIKGKDVALAKGEYSNLKITTVTDLKIAKSMIEK 235
16 -80.7004cvh_A mol:protein length:411 ISOPRENOID SYNTHASE DOMAIN-CONTAINING PROTEIN  ali model follow..  25  7VAAVLPAGGCGERMGVPTPKQFCPILERPLISYTLQALERVCWIKDIVVAVTGENMEVMKSIIQKYKRISLVEAGVTRHRSIFNGLKALAEPEVVIIHDAVRPFVEEGVLLKVVTAAKEH-GAAGAIRPLVSTVVSPSA-DGCLDYSLERARHRASEMPQAFLFDVIYEAYQQCSDYDLEGTECLQLLKYCCTKAKLVEGSPDLWKVTYKRDLYAAESIIKE 239
17 -70.0001w55_A mol:protein length:371 ISPD/ISPF BIFUNCTIONAL ENZYME  ali model follow..  25  4MSLIMLAAGNSTRFNTKVKKQFLRLGNDPLWLYATKNLSSFYPFKKIVVTSSNITYMK-----KFTKNYEFIEGGDTRAESLKKALELI-DSEFVMVSDVARVLVSKNLFDRLIENLDKA-DCITPALKVADTTLF-------DNEALQREKIKLIQTPQISKTKLLKKALDQNLE----FTDDSTAIAAMGGKIWFVEGEENARKLTFKEDLKKLDLPTPS 207
18 -24.6001gq9_A mol:protein length:245 3-DEOXY-MANNO-OCTULOSONATE CYTIDYLYLTRANSFERASE  ali model follow..  17  3AVIVIPARYGSSRLPG---KPLLDIVGKPMIQHVYERALQVAGVAEVWVATDDPRVEQAVQAFGGKAIMT--ESGTDRLVEVMHKV----EADIYINLQGDEPMIRPRDVETLLQGMRDDPALPVTLCHAISAAEAAEPSTVKVVVNTRQDALYFSRSPYAYRRDVLQNQLPESMPEQAESLEQLRLMNA-GINIRTFEVAATGPGVDTPACLEKVRALMAQ 239
19 -22.6002mzb_A mol:protein length:196 Adenosylcobinamide-phosphate guanylyltransferase  ali model follow..  15  1MDALIMAGGKGTRMG-GVEKPLIKLCGRCLIDYVVSPLLK-SKVNNIFIATSPNTPKTKEYINSAYKDYKNIVVIDTSGKGYIEDLNECIGSEPFLVVSSDLINLKSKIINSIVDYFYCIKAKTPDVEALAVMIPKEKYPNPSIDFN-----------------GLVPAGINVVSPKHGYQKEEIMVIDEL-------------FNINTKDDLKLAEMLLKK 193
20 -22.2004evw_A mol:protein length:255 Nucleoside-diphosphate-sugar pyrophosphorylase  ali model follow..  14  2..IVIPMAGMSSRFGYTQPKYMLEAHGQTLFEHSVNSFAAYFASTPFLFIVRNVYDKATQLGIKQFYIAELHTETRGQAETVTLGLEELAKQGVDYQGSITVFNIDTFRPNFVFPDISQHSDGYLEVFQGGGDAKPEHAGSTKVIQTAEKNPISDLCSTGLYHFEYVARPSQEWERGELYIAPLYNELIQKGLNIHYHLIARHEIFCGVPDEYTDFLRQPQP 247
21 -22.2003pol_A mol:protein length:276 3-deoxy-manno-octulosonate cytidylyltransferase  ali model follow..  13  15KHIVIPARFSSSRLPG---KPLLLIHDRPMILRVVDQAKKVEGFDDLCVATDDERIAEICRAEGVDVVLT--PSGTDRLSEVARIKGW-DADDIIVNVQGDEPLLPAQLVQQVAKLLVDKPNCSMLCEPIHALDEFQRDSIVKVVMSKQNEALYFSRATYAYRVSLLQETWEMGKLEKLESLEQLRVLEN-GHRIAIAVAEANPPGVDTQADLDRLNNMPVE 263
22 -21.5003d5n_A mol:protein length:197 Q97W15_SULSO  ali model follow..  17  3IGVIILAAGEGKRFGG--DKLLAKIDNTPIIMRTIRIYGDLE-----KIIIVGKYVNEMLPLLMDQIVIYNPFWNEGISTSLKLGLRFFKDYDAVLVALGDMPFVTKEDVNKIINTFKPNCKAVIPTHK-------------------------ERGNPVLISKSLFNEIEKLRGDVGAR-----VILNKIKIEELCFIECSEGVDIDKKEDLM........ 182
23 -21.4002y6p_A mol:protein length:234 3-DEOXY-MANNO-OCTULOSONATE CYTIDYLYLTRANSFERASE  ali model follow..  16  3RAVIIPARLGSTRLKE---KPLKNLLGKPLIRWVVEGLVKT--GERVILATDSERVKEVVEDLCEVFLTP--PSGSDRVLYVVRDL----DVDLIINYQGDEPFVYEEDIKLIFRELEKGERVVTLARKDKEAYE--RPEDVKVVLDREGYALYFSRSPYGFRKETLMEAMPPSKLEQIEGLEQLRLLEN-GIKIKVLITENYYHGVDTEEDLKIVEEKLKN 233
24 -21.2001qwj_A mol:protein length:229 cytidine monophospho-N-acetylneuraminic acid synthetase  ali model follow..  11  4LAALVLARGGSKGIPL---KNIKRLAGVPLIGWVLRAALDAGVFQSVWVSTDHDEIENVAKQFGAQRSSETSKDSSTSLDAIVEFLNYHNEVDIVGNIQATSPCLHPTDLQKVAEMIREEGYDSVFSVVRRHEIQKGVREVTEPLNLNPAKRPRRQDWDGELENGSFYFAKRHLIEMGYLQGGKMAYYEM---------RAEHSVDIDVDIDWPIAEQRVLR 222
25 -21.2001hv9_A mol:protein length:456 UDP-N-ACETYLGLUCOSAMINE PYROPHOSPHORYLASE  ali model follow..  15  6MSVVILAAGKGTRMYSDLPKVLHTLAGKAMVQHVIDAANELG-AAHVHLVYGHGGDLLKQALKDDNLNWVLQAEQLGTGHAMQQAAPFFADDEDILMLYGDVPLISVETLQRLRDA-KPQGGIGLLTVKLDDPYGRITRENGKVTGIVEHKDATDEQRQLIANGADMKRWLAKLTNNNYYITDIIALAYQEGREIVAVQRLSEVEGVNNRLQLSRLERVYQS 241
26 -21.2003pnn_A mol:protein length:303 Conserved domain protein  ali model follow..  18  8..LFVLAAGMGSRYGS--LKQLDGIGGDTIMDYSVYDAIRAG-FGRLVFVIRHSFEKEFREKILTKYEGRIPVELVFQEHAVLMGRDAIREPFAVINADDF-RNGFEVLARKLMTLEGKQGEYCMVGYRVGNTLSEQVDEKHLLTGVVERTGIERTDTPDYFDYINFLNAHGQEPKSEFFIPF-NDLIRSGRASVEVLDTTARWFGVTYSDDRPGVVAKLRE 291
27 -21.0002dpw_A mol:protein length:232 Hypothetical protein TTHA0179  ali model follow..  14  3PSAIVLAGGKEAWAEGVGSKALVPYRGRPMVEWVLEALYAA-GLSPVYVGENPG---------LVPAPALTLPDRGGLLENLEQALEHVEGRVLVATGD---PHLTEEAVRFVLDKAPEA--ALVYPIVPKEAVEARFPRTKLREGTFTGGNLLLLDKSLFRKALPLARRVVALRKRPLALAREARAQRILGVEARALVTPYPEVDVDREEDLV........ 231
28 -20.9004fce_A mol:protein length:459 Bifunctional protein GlmU  ali model follow..  17  9MSVVILAAGKGTRMYSDLPKVLHPLAGKPMVQHVIDAAMKLG-AQHVHLVYGHGGELLKKTLADPSLNWVLQAEQLGTGHAMQQAAPHFADDEDILMLYGDVPLISVDTLQRLLAA-KPEGGIGLLTVKLDNPYGRIVRENGDVVGIVEHKDASDAQRELVANGRDLKRWLSLLDNNNFYITDIIALAHADGKKIATVTRLSEVEGVNNRLQLSALERVFQT 244
29 -20.9005vmk_A mol:protein length:462 Bifunctional protein GlmU  ali model follow..  17  5TTVIILAAGKGTRMRSQLPKVLQPLAGRPLLGHVIKTAKQLL-AENIITIYGHGGDHVKKTFAQENIQWVEQAEQLGTGHAVQMTLPVLPKDGISLILYGDVPLVRQTTLEQLIEV-SNKTGIGMITLHVDNPYGRIVRQDGKIQAIVEHKDATEAQRQYCVSNAKLHEWLPKLSNENYYLTDIVAMAVADGLEIASIELAFEVEGVNDRLQLAALEREFQK 240
30 -20.8002v0h_A mol:protein length:456 BIFUNCTIONAL PROTEIN GLMU  ali model follow..  14  6LSAVILAAGKGTRMYSDLPKVLHTIAGKPMVKHVIDTAHQLG-SENIHLIYGHGGDLMRTHLANEQVNWVLQTEQLGTAHAVQQAAPFFKDNENIVVLYGDAPLITKETLEKLIEA-KPENGIALLTVNLDNPYGRIIRENGNVVAIVEQKDANAEQLNMVSDGASFKKWLARVGNNNYYLTDLIALANQDNCQVVAVTDVMEVEGANNRLQLAALERYFQN 241
31 -20.4001vh1_A mol:protein length:256 3-deoxy-manno-octulosonate cytidylyltransferase  ali model follow..  14  3FVVIIPARYASTRLPG---KPLVDINGKPMIVHVLERARESG-AERIIVATDHEDVARAVEAAGGEVCMT-HQSGTERLAEVVEKCAF-SDDTVIVNVQGDEPMIPATIIRQVADNLAQRQVGATLAVPIHNAEEAFNPNAVKVVLDAEGYALYFSRATYGYRAGFIRRNWQPSPLEHIEMLEQLRVLWY-GEKIHVAVQEVPGTGVDTPEDLERVRAEMRG 249
32 -20.1003oam_A mol:protein length:252 3-deoxy-manno-octulosonate cytidylyltransferase  ali model follow..  15  3FTVVIPARYQSTRLPG---KPLADIGGKPMIQWVYEQAMQAG-ADRVIIATDDERVEQAVQAFGGVVCMT--QSGTERLAEVVAKMA-IPADHIVVNVQGDEPLIPPAIIRQVADNLAACSAPATLAVEIEDEAEVFNPNAVKVITDKSGYALYFSRATYAYRAGFINTDWQPSQLEKIECLEQLRVLWHGEKIHVAVALEAPPAGVDTPEDLEVVRRIVAE 249
33 -20.1001e5k_A mol:protein length:201 MOLYBDOPTERIN-GUANINE DINUCLEOTIDE BIOSYNTHESIS PROTEIN A  ali model follow..  18  7ITGVVLAGGKARRMGGV-DKGLLELNGKPLWQHVADALM--TQLSHVVVNANRHQEIYQASGLKVIEDSLADYPGP--LAGMLSVMQQE-AGEWFLFCPCDTPYIPPDLAARLNHQRKDAPV----------VWVHDGERDHPTIALVNRAIEPLLLEYLQAGERRVMVFMRLAGGHAVDFSDHKDAF----------------VNVNTPEELARWQEKRS. 195
34 -20.0003foq_A mol:protein length:503 Bifunctional protein glmU  ali model follow..  22  9TAVLVLAAGPGTRMRSDTPKVLHTLAGRSMLSHVLHAIAKLAPQRLIVVLGHDHQRLVGELADTLGRTIDVALQDRPLGHAVLCGLSALPDAGNVVVTSGDTPLLDADTLADLIATHRAVSAAVTVLTTTLDD-RILRTQDHEVMAIVEQTDATPSQREYAFDIAALRSALSRLSSNNLYLTDVIAILRSDGQTVHHVDDSALVAGVNNRVQLAELASELNR 255
35 -20.0003ngw_A mol:protein length:208 Molybdopterin-guanine dinucleotide biosynthesis protein A (MobA)  ali model follow..  12  1MKVAVLVGGVGRRIGME--KTEVMLCGKKLIEWVLEKYS--PFQTVFVCRDEKQAEKLSSRY-----EAEFIWDLHKGVGSIAGIHAALRHFGSCVVAAIDMPFVKPEVLEHLYKEGEKAGCDALIPKHADELERAILQGIRKILVPLERLNVVYYPVEKLRKFDKELISF---------------------------------FNINTPDDLKRAEEICSK 194
36 -20.0003jtj_A mol:protein length:253 3-deoxy-manno-octulosonate cytidylyltransferase  ali model follow..  16  6FIAIIPARYASTRLPG---KPLADIAGKPMVVHVMERALASG-ADRVIVATDHPDVVKAVEAAGGEVCLT--QSGTERLAEVIEHYGFADDDIIVNV-QGDEPLVPPVIIRQVADNLAACSAGATLAVPIASSEEAFNPNAVKVVMDAQGYALYFSRATYAYRAGFIRRNWAPSQLEQIELLEQLRVLWY-GEKIHVAVKAVPAVGVDTQSDLDRVRAIMLN 252
37 -19.9003tqd_A mol:protein length:256 3-deoxy-manno-octulosonate cytidylyltransferase  ali model follow..  15  10FRVIIPARFDSTRLPG---KALVDIAGKPMIQHVYESAIKSG-AEEVVIATDDKRIRQVAEDFGAVVCMT--QSGTERIAEAAVALG-FEDDEIIVCLQGDEPLIPPDAIRKLAEDLDEHDNVKVLCTPITEVDELFNPHSTKVVLNRRNYALYFSHAPYAYRVGFLEESWDACPAEKMEALEQLRILWH-GGRIHMVVAKSKPPGVDTEEDLERVRAYF.. 256
38 -19.9001vh3_A mol:protein length:262 3-deoxy-manno-octulosonate cytidylyltransferase  ali model follow..  14  3FTVIIPARFASSRLPG---KPLADIKGKPMIQHVFEKALQSG-ASRVIIATDNENVADVAKSFGAEVCMT--NSGTERLAEVVEKLA-IPDNEIIVNIQGDEPLIPPVIVRQVADNLAKFNVNASLAVKIHDAEELFNPNAVKVLTDKDGYVLYFSRSVYAYRAGFIKQQWAPTQLENLEKLEQLRVLYN-GERIHVELKEVPAVGVDTAEDLEKVRAILAA 253
39 -19.6003k8d_A mol:protein length:264 3-deoxy-manno-octulosonate cytidylyltransferase  ali model follow..  14  13FVVIIPARYASTRLPG---KPLVDINGKPMIVHVLERARESG-AERIIVATDHEDVARAVEAAGGEVCMT--QSGTERLAEVVEKCAF-SDDTVIVNVQGDEPMIPATIIRQVADNLAQRQVGATLAVPIHNAEEAFNPNAVKVVLDAEGYALYFSRATYGYRAGFIRRNWQPSPLEHIEMLEQLRVLWY-GEKIHVAVQEVPGTGVDTPEDLERVRAEMR. 258
40 -19.6004jd0_A mol:protein length:251 Nucleotidyl transferase  ali model follow..  15  8..AIVLASGAGKRLRGDVPKVFYRFDGCELVKYPMISLMKNG-VERFVLVVSEGYRDLGEKVLNDLGVEGIVVENKKNAYSFFLSEPYVESEKFFLSCGDS--LFPPSALKSAFSEDEFHIKLGVSKRS-PEKASKVLVNENRIVKIGKRIDQYNYFDTGVFTKKVYSLKESFSWTEDISLYHVLQKAVDTGMIVKVFDGNALWTEIDSPADLNSKVYEL.. 235
41 -19.5004xwi_A mol:protein length:262 3-deoxy-manno-octulosonate cytidylyltransferase  ali model follow..  19  7FTVVIPARYASTRLPG---KPLQDIAGQPMIQRVWNQARKSA-ASRVVVATDDERILAACQGFGAEALLT--NSGTDRLEEVASRLGL-ASDAIVVNVQGDEPLIPPALIDQVAANLAAHPEAAILAEPIHEVSALFNPNVVKVATDIDGLALTFSRAPYAYRVGFLADAWGPCWLENAESLEQLRALWH-GVRIHVADARENLPGVDTPEDLERVRRVLGG 256
42 -19.5001hm0_A mol:protein length:468 N-ACETYLGLUCOSAMINE 1-PHOSPHATE URIDYLTRANSFERASE  ali model follow..  17  6NFAIILAAGKGTRMKSDLPKVLHKVAGISMLEHVFRSVGAIQPEKTVTVVGHKAEL--VEEVLAGQTEFVTQSEQLGTGHAVMMTEPILEGSGHTLVIAGDTPLITGESLKNLIDFHINHKNVATILTAETDN-RIVRNDNAEVLRIVEQKDATDFEKQYVFDNERLFEALKNINTNNYYITDVIGIFRETGEKVGAYKDFDESLGVNDRVALATAESVMRR 244
43 -19.5002waw_A mol:protein length:199 MOBA RELATE PROTEIN  ali model follow..  20  6VTGVVLAAGYSRRLGT--PKQLLPLGDTTLLGATLAMARRCPFDQLIVTLGGAADEVLEKVELDGLDIVLVDDAGLGCSSSLKSALTWVDPTEGIVLMLGDQPGITASAVASLIAGGRGAT----IAVCEYANGI----------------------HPFWVSRGVFGDLAELHGDKGVW-----RLIESGRHGVRRIRVDAD-LDVDTWDDYERLLASVVR 197
44 -19.3001g95_A mol:protein length:459 N-ACETYLGLUCOSAMINE-1-PHOSPHATE URIDYLTRANSFERASE  ali model follow..  17  3NFAIILAAGKGTRMKSDLPKVLHKVAGISMLEHVFRSVGAIQPEKTVTVVGHKAEL--VEEVLAGQTEFVTQSEQLGTGHAVMMTEPILEGSGHTLVIAGDTPLITGESLKNLIDFHINHKNVATILTAETDN-RIVRNDNAEVLRIVEQKDATDFEKQYVFDNERLFEALKNINTNNYYITDVIGIFRETGEKVGAYKDFDESLGVNDRVALATAESVMRR 241
45 -19.2001eyr_A mol:protein length:228 CMP-N-ACETYLNEURAMINIC ACID SYNTHETASE  ali model follow..  13  5NIAVILARQNSKGLPL---KNLRKMNGISLLGHTINAAISSKCFDRIIVSTDGGLIAEEAKNFGVERPAELASDTASSISGVIHALETIGSNGTVTLLQPTSPLRTGAHIREAFSLFDEKIKGSVVSACPMETLLQINNGEYAPMRHLSDLEQPRQQLPQAFRPNIYINDTASLIANNCFFIAPTKLY---------IMSHQDSIDIDTELDLQQAENILNH 225
46 -18.9002we9_A mol:protein length:197 MOBA-RELATED PROTEIN  ali model follow..  17  6ITGVVLAAGRSNRLGT--PKQLLPYRDTTVLGATLDVARQAGFDQLILTLGGAASAVRAAMALDGTDVVVVEDVERGCAASLRVALARVHPRTGIVLMLGDQPQVAPATLRRIIDVGPATEHPFWFSRTVFGELARLHGDKGVRELAVDGCVPLDVDTWDDYR........................................................... 189
47 -18.3002e8b_A mol:protein length:201 Probable molybdopterin-guanine dinucleotide biosynthesis protein A  ali model follow..  13  15NTCYVLAGGKSKRFGED--KLLYEIKGKKVIERVYETAK--SVFKEVYIVAKDRE----KFSFLNAPVVLDEFEESASIIGLYTALKHA-KEENVFVLSGDLPLMKKETVLYVLENFKEP------------VSVAKTEKLHTLVGVYSKKLLEKIEERIKKGDYRIWALLKDVGYNEVEIPEELRYT----------------LNMNTKEDLKRILAIENH 200
48 -18.0005esz_C mol:protein length:222 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase,Envelope glycoprotein gp160  ali model follow..  5  2..........................................................................................................................................................LIRIGHGFDVHAFGCVTLHCANLTKANLTNVNNRTNVSNIIGNITDEVRNCSFNMTTELRDKKQKVHA 71
49 -17.4006b5e_A mol:protein length:296 Glucose-1-phosphate thymidylyltransferase  ali model follow..  13  1MRGIILAGGSGTRLYMGISKQLLPVYDKPMIYYPLTTLMMAG-IRDIQLITTPHDAPGFHRLLGDGAHLGVNISYATQDQAFVIGANHIGADSVALVLGD---IFYGPGLGTSLKRFQSISGGAIFAYWVANPSAVEFGAEGMALSLEEKPV--YFYDNDVIE---IARGLKKSARGEYEITEVNQVYLNQGRLAVEVLARGT-LDTGTFDSLLDAADFVRT 238
50 -17.4004mnd_A mol:protein length:479 CTP L-myo-inositol-1-phosphate cytidylyltransferase/CDP-L-myo-inositol myo-inositolphosphotransferase  ali model follow..  14  41MKAVILAAGLGTRLG-GVPKPLVRVGGCEIILRTMKLLSP--HVSEFIIVASRYADDIDAFLKDKGFNYKIVRHDRPEKGSLLVAKNHVEDRFILTMGD----HVYSQQFIEKAVRGEGVIADREPRFVDIGEATKIRVEDGRVAKIGKDLREFDCVDTGFFVLD--DSIFEHAEKLRDREEIPLSEIVKLARLPVTYVDGELWMDVDTKEDVRRANRALVS 256
51 -16.8002pa4_A mol:protein length:323 UTP-GLUCOSE-1-PHOSPHATE URIDYLYLTRANSFERASE  ali model follow..  15  15..VVVPAAGLGTRFTKTVPKELLPVVDTPGIELIAAEAAELG-ATRLAIITAPNKAGVLAHFERSSELEETLMERGKTDHAVGLAESVLDDDEDVVAVMLPDDLVLPTGVMERMAQVRAEFGGSVLCAVEVSE-DTKDSDVKKVKGMVEKPAIEDAPSRKIFD---ALRRITPGAGGELQLTDAIDLLIDEGHPVHIVIHQGKRHDLGNPGGYIPACVDF.. 280
52 -16.3004ho0_A mol:protein length:297 Glucose-1-phosphate thymidylyltransferase  ali model follow..  14  1MKGIILSGGSGTRLYKVVSKQLLPVYDKPMVYYPLSVLMLAG-IKDILIISTPEDTPRFEQLLGGGSELGISLSYAVQSSAFIIGEEFIGDDNVALVLGD---IFYGHGFTELLQRAANRKSGATIFGYNVKDPQRFGDEKGKVISIEEKPE--YFYDNRVVD---IAKNITPSARGELEITD-KAYLELGELHVELLGRGFAWLDTGTHESLLQASQFIET 239
53 -16.3002e3d_A mol:protein length:302 UTP--glucose-1-phosphate uridylyltransferase  ali model follow..  18  11..AVIPVAGLGTRMTKAIPKEMLPLVDKPLIQYVVNECIAAG-ITEIVLVTHSSKNSIENHFDTSFELEAMLEKRVKRQHAVLCAHPVVGDEPVAVI-DEYESDLSQDNLAEMIRRFDETGHSQIMVEPVADVVELAPGESVPMVGVVEKPKADVAPSADIWP---LLAKTPPGAGDEIQLTD-DMLIEKETVEAYHMKGKSHDC................. 266
54 -16.0003zlk_A mol:protein length:303 GLUCOSE-1-PHOSPHATE THYMIDYLYLTRANSFERASE  ali model follow..  15  7RKGIILAGGSGTRLHLAISKQLLPVYDKPMIYYPLSTLMLAG-IREILIISTPQDTPRFQQLLGDGSNWGLDLQYAVQPSAFLIGESFIGNDLSALVLGD---LYYGHDFHELLGSASQRQTGASVFAYHVLDPERYGDQGGKAISLEEKPL--YFYDQQVVD---IARDLKPSPRGELEITD-RAYLERGQLSVEIMGRGYAWLDTGTHDSLLEAGQFIAT 245
55 -16.0005ify_A mol:protein length:305 Glucose-1-phosphate thymidylyltransferase  ali model follow..  14  5RKGIILAGGSGTRLYHAVSKQLLPVYDKPMIYYPLSTLMIAG-IRDVLIISTPQDTPRFESMLGDGSQWGMNIQYATQPSAFVIGRDFVGNEPSALILGD---IFYGHDLAKQLERASAKDTGATVFAYHVQDPERYGDREFRAISIEEKPA--YFYDRQVCD---IAADIKPSARGELEITD-SRYLAAGQLDVELMGRGYAWLDTGTHDSLIEAGTFIAT 243
56 -16.0001lvw_A mol:protein length:295 glucose-1-phosphate thymidylyltransferase  ali model follow..  13  4MKGIVLAGGSGTRLYRAVSKQLLPIYDKPMIYYPLSVLMLAG-IRDILIISTPRDLPLYRDLLGDGSQFGVRFSYRVQEEAFIVGKDFIGDSKVALVLGD---VFYGHRFSEILRRAASLEDGAVIFGYYVRDPRPFGDSEGRVISIEEKPS--YFYDNQVVE---IARRIEPSDRGELEITS-EEYLRMGKLRVELMGRGMAWLDTGTHDGLLEASSFIET 242
57 -15.9001mc3_A mol:protein length:296 GLUCOSE-1-PHOSPHATE THYMIDYLYLTRANSFERASE  ali model follow..  12  4MKGIILAGGSGTRLHRGVSKQLLPIYDKPMIYYPLSVLMLAG-IREILIITTPEDKGYFQRLLGDGSEFGIQLEYAEQPSAFIIGETFLNGEPSCLVLGD---IFFGQGFSPKLRHVAARTEGATVFGYQVMDPERFGDDNFRAISLEEKPK--YFYDSKVVE---YAKQVKPSERGELEITS-QMYLEAGNLTVELLGRGFAWLDTGTHDSLIEASTFVQT 242
58 -15.7001h5r_A mol:protein length:293 GLUCOSE-1-PHOSPHATE THYMIDYLYLTRANSFERASE  ali model follow..  14  4RKGIILAGGSGTRLYMAVSKQLLPIYDKPMIYYPLSTLMLAG-IRDILIISTPQDTPRFQQLLGDGSQWGLNLQYKVQPSAFIIGEEFIGGDDCALVLGD---IFYGHDLPKLMEAAVNKESGATVFAYHVNDPERYGDKNGTAISLEEKPL--YFYDNDVVQ---MAKNLKPSARGELEITD-RIYLEQGRLSVAMMGRGYAWLDTGTHQSLIEASNFIAT 242
59 -15.5001iim_A mol:protein length:292 glucose-1-phosphate thymidylyltransferase  ali model follow..  14  4RKGIILAGGSGTRLYMAVSQQLLPIYDKPMIYYPLSTLMLAG-IRDILIISTPQDTPRFQQLLGDGSQWGLNLQYKVQPSAFIIGEEFIGHDDCALVLGDN--IFYGHDLPKLMEAAVNKESGATVFAYHVNDPERYGDQKGTAVSLEEKPL--YFYDNSVVE---MAKNLKPSARGELEITD-RIYMEQGRLSVAMMGRGYAWLDTGTHQSLIEASNFIAT 242
60 -15.5003hl3_A mol:protein length:269 Glucose-1-phosphate thymidylyltransferase  ali model follow..  13  19MKGIILAGGTGSRLYKVTNKHLLPVGRYPMIYHAVYKLKQCD-ITDIMIITGKEHMGDVVSFLGSGQEFGVSFTYRVQDKALGLCEDFVGNDRMVVILGDN---IFSDDIRPYVEEFTNQKEGAKVLLQSVDDPERANIQNRKIIEIEEKPK--YLYDSKVFS---YIKELKPSARGELEITDINNWYLKRGVLTYNEMSGW--TDAGTHVSLQRANALARD 253
61 -15.4004y7t_A mol:protein length:231 Nucleotidyl transferase  ali model follow..  22  1MKAMILAAGKGERMRLHTPKPLVPVAGQPLIEYHLRALAAAG-VTEVVINHAGDGSRFGLSIRYSPEGEPLETGG-----GIFKALPLLGDAPFLLVNGDV---WTDYDFARLQAPLQGLAHLVLVDNPGHHGRGDFRLVGEQVVDGDDAPGTLTFSGISVLHPALFEGCQAGAFKLAPLLRQAMAAGKVSGEHYR--------VDVGTLERLAEAESLIGE 221
62 -15.3004d48_A mol:protein length:302 GLUCOSE-1-PHOSPHATE URIDYLYLTRANSFERASE  ali model follow..  17  11..AVIPVAGLGTRMTKAIPKEMLPLVDKPLIQYVVNECIAAG-INEIVLVTHSSKNSIENHFDTSFELEAMLEKRVKRQHAVMCAWPVIGNEPVAVI-DEYESDLSKDNLAEMIRRFDETGHSQIMVEPVADVTALNPGDSAPMVGVVEKPKADQAPSADIWP---LLAKTPPGAGDEIQLTD-AMLMEKETVEAYHLKGVSHDC................. 266
63 -15.3002ggo_A mol:protein length:401 401aa long hypothetical glucose-1-phosphate thymidylyltransferase  ali model follow..  12  1MKAFILAAGSGERLEPTRPKAFVPILSKPLIEYQIEYLRKCG-IRDITVIVSSKNKEYFEKKLKEISIVT-----KDDIKGTGAAILSAKFNDEALIIYGDLFFSNEKEICNIITL----KENAIIGVKVSNPKDLVLDNQNNLSKIIEKPE--YKLNSDIFT---YLDKISISERGELELTDAINLMAK-DHRVKVIEYEGYWMDIGKPWNIIDVNKWALD 224
64 -15.1002ux8_A mol:protein length:297 GLUCOSE-1-PHOSPHATE URIDYLYLTRANSFERASE  ali model follow..  14  11..AVFPVAGLGTRFTKAMPKEMLPVVDRPLIQYAVDEAVEAG-IEQMIFVTGRGKSALEDHFDIAYELEATMAARGKSLHAVWCARDIVGDEPFAVLLPDDFMFGQPGCLKQMVDAYNKVGGNLICAEEVPDTPGTQDGVLTEVKGLVEKPAPGTAPSPEVMR---ILENQGKGAGGEIQLTD-QRMIGDQPFHGVTFQGTRYDC................. 258
65 -15.1003juj_A mol:protein length:281 UDP-glucose pyrophosphorylase (GalU)  ali model follow..  15  5..CLFPAAGYGTRFTKTIPKEMLPIVDKPLIQYAVEEAMEAG-CEVMAIVTGRNKRSLEDYFDTSYEIEHQIQGTNKENHAILTGEALIGNEPFAVI-DDLCISHDHPSVLKQMTSLYQKYQCSIVAIEEVARGEWLEEGVYEIKDMVEKPNQEDAPSPDIFE---ILSETKPGKNNEIQITD-RTQAKRKRIIAYQFKGKRYDC................. 255
66 -15.1001jyk_A mol:protein length:254 CTP:phosphocholine Cytidylyltransferase  ali model follow..  11  20VKAIILAAGLGTRLRENTPKALVQVNQKPLIEYQIEFLKEKG-INDIIIIVGYLKEQF--DYLKEKYGVRLVFNDKYADYNNFYSLYLVKENSYVIDADNY---------NMFRNDLTRSTYFSVYREDCTNEWFLVYGDDYKVQDIIVDSKAGRILSGVSFWDAPTAEKIVSFIDKAYVSGEFVDNIKELDVYVEELEGNS--YEIDSVQDYRKLEEILKN 246
67 -15.0005i1f_A mol:protein length:302 UTP--glucose-1-phosphate uridylyltransferase  ali model follow..  15  9..AVFPVAGLGTRFTKASPKEMLPVVDKPLIQYAVEEAIEAG-ITEMIFVTGRSKRAIEDHFDKSYEIEAELEARGKEKHAVLCAEKLVGDNPFAVILADDLLDGPTPVLRQMIDVFDHYHASVIGVEEIAPDGKRWEDDLFKLSGIVEKPEPAQAPSPKIFK---HLRGLKPGAGGELQLTD-QSLLTDEQVLAYRYDGTRFDC................. 258
68 -14.9005vct_A mol:protein length:302 UTP--glucose-1-phosphate uridylyltransferase  ali model follow..  13  9..AVFPVAGLGTRFTKASPKEMLPVVDKPLIQYAVEEAIAAG-ITEMIFVTGRSKRAIEDHFDKSYEVEAELEARGKAKHAVLCAEKLVADNPFAVILADDLLDGNPPVMKQMVDVFDHYHSSVIGVEEIPPDGKEWEESIVKMSAIVEKPAPEVAPSPRIFE---HLRALKPGAGGELQLTD-QALLADEQVLAYKYQGTRYDC................. 258
69 -14.8005ids_A mol:protein length:302 Glucose-1-phosphate thymidylyltransferase  ali model follow..  13  6RKGIILAGGSGTRLHLAISKQLLPVYDKPMIYYPLSTLMLAG-MRDVLVISTPQDTPRFQQLLGDGSQWGMNLQYAVQPSAFIIGEQFIGNAPSALVLGD---IYYGHDFQPLLKAADAQSSGATVFAYHVHDPERYGNAQGQAVSIEEKPK--YFYDQQVVD---IAKAVKPSARGELEITS-QAYMQQGQLNVQTMGRGYAWLDTGTHDSLLDASQFIAT 244
70 -14.6005j49_A mol:protein length:301 UTP--glucose-1-phosphate uridylyltransferase  ali model follow..  15  9..AVFPVAGLGTRFTKASPKEMLPIVDKPLIQYAVEEAMAAG-ITEMIFVTGRSKRAIEDHFDKSYEIEAELQARGKDKHAVLCAEKLVGDNPFAVILADDLLYGTPPVMAQMIEVFDHYHSSVIGVEEIPADGKEWEDSIIKMSGIVEKPEPNVAPSPRIFE---HLRALKPGAGGELQLTD-QSLLADEQVLAYKYHGTRFDC................. 258
71 -13.6006caj_J mol:protein length:452 Translation initiation factor eIF-2B subunit gamma  ali model follow..  16  3FQAVVMAVGGGSRMTSSIPKPLLPVGNKPLIWYPLNLLERVG-FEEVIVVTTRDVQKALCAEFKMKMKPDIVCIPDDADMGTADSLRYIYPTDVLVLSD----LITDVALHEVVDLFRAYDASLAMLM.............................................................................................. 132
72 -13.1005xhw_A mol:protein length:237 Putative 6-deoxy-D-mannoheptose pathway protein  ali model follow..  14  8YDVVILAGGLGTRLKGDIPKPMVDISGKPFLYRLMEYLEDQG-VQRIILSLSIKDNPVNSKVDFIIENEPLGTGG-----AIKNACKYIEASKFIVINGDT---YCELDYKKFIE-SSLDSDLQISGVEVDDVCRLDIDHDFHVNSIVEKGHQGTGII-YILSKKIIEDYPHD------KFSFELDFLPKFTGVFKAFVTKAYFIDIGIPEDYYKACEKFK. 231
73 -12.6002qh5_A mol:protein length:308 Mannose-6-phosphate isomerase  ali model follow..  11  5IKNILLSGGSGKRLRSLYPKQFLKLDHKSLFELSFKRNASL--VDETLIVCNEKHYFLALEEIKNSVGFLLESLSKNTANAIALSALMSDKEDLLIVTPSDHLIKDLQAYENAIKKAIDAQKGFLVTFGVSID--KPNTEFGYIESPNGLDVKRFIEKPSLDKAIEFQKSGGFYFNSGMFVFQAGVFLDEL............................... 202
74 -12.5002x5s_A mol:protein length:336 MANNOSE-1-PHOSPHATE GUANYLYLTRANSFERASE  ali model follow..  15  2MKALILAGGSGERFTPETPKQFLKLFGKSLMRWTFERVLEEMDPKDVIVVTHKDYVERTKKELPELPDENIIA-KKNTAPACFIGTKLADDDEPVLVLPADHRIPDTKKFWKTVKKALDEKYDGLFTFGIVPTRPETGYGYIEIGEELEEGVH--REKPDLETAKKFVESGRFLWNSGMFLWKAREFIEEVKVCEPSIYENLKDVDPRNFEELK........ 227
75 -12.2001tzf_A mol:protein length:259 Glucose-1-phosphate cytidylyltransferase  ali model follow..  15  3SKAVILAGGLGTRLSIVKPKPMVEIGGKPILWHIMKMYSVHG-IKDFIICCGAENRMEVHHKRVEPWNVTLVDTGDSTGGRLKRVAEYVKDDEAFLFTYG--DGVADLDIKATIDFHKAHGKATLTATFPPGRFGALDIQAGQVRSFQEKPKGDGAMINGGF-FVLNPSVIDLIDNDATTWEQEPLMTLAQQGELMAFEHPGFWQPMDTLRDKVYLEGLWEK 250
FFAS is supported by the NIH grant R01-GM087218-01
1 4 6 8 2 5   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Luz JG, Hassig CA, Pickle C, Godzik A., Meyer BJ, Wilson IA. XOL-1, primary determinant of sexual fate in C. elegans, is a GHMP kinase family member and a structural prototype for a class of developmental regulators. Genes Dev. 2003 Apr 15;17(8):977-90. Epub 2003 Apr 02.