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Query: PF01262.21; Q9S227_STRCO/141-353; Alanine dehydrogenase/PNT, C-terminal domain, from PfamA32U

Results of FFAS03 search in PDB1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst APQVGAYHLMAANGGRGVLPGGVPGVLAGRAVVIGGGVSGWNAAQIAIGLGFHVTLLDKDITKLREADKIFGTKIQTVVSNAFELEKACLEADLVIGAVLIPGAKAPKLVTNELVSRMKPGSVLVDIAIDQGGCFEDSHPTTHAEPTFPVHNSVFYCVANMPGAVPNTSTYALTNATLPYIVELADRGWAEALRRDPALAKGLNTHDGKVVYRLast
1 -60.3002vhv_A mol:protein length:377 ALANINE DEHYDROGENASE  ali model follow..  65  141AAQVGAYHLMRTQGGRGVLMGGVPGVEPADVVVIGAGTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCGRIHTRYSSAYELEGAVKRADLVIGAVLVPGAKAPKLVSNSLVAHMKPGAVLVDIAINQGGCFEGSRPTTYDHPTFAVHDTLFYCVANMPASVPKTSTYALTNATMPYVLELADHGWRAACRSNPALAKGLSTHEGALLSE 353
2 -59.9001pjb_A mol:protein length:361 L-ALANINE DEHYDROGENASE  ali model follow..  50  140SVQFGARFLERQQGGRGVLLGGVPGVKPGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELLYSNSAEIETAVAEADLLIGAVLVPGRRAPILVPASLVEQMRTGSVIVDVAVDQGGCVETLHPTSHTQPTYEVFGVVHYGVPNMPGAVPWTATQALNNSTLPYVVKLANQGLKAL-ETDDALAKGLNVQAHRLVHP 351
3 -59.0002eez_A mol:protein length:369 Alanine dehydrogenase  ali model follow..  56  139APQVGAQFLEKPKGGRGVLLGGVPGVAPASVVILGGGTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFGGRVITLTATEANIKKSVQHADLLIGAVLVPGAKAPKLVTRDMLSLMKEGAVIVDVAVDQGGCVETIRPTTHAEPTYVVDGVVHYGVANMPGAVPRTSTFALTNQTLPYVLKLAEKG-LDALLEDAALLKGLNTHKGRLTHP 350
4 -53.0004o9u_E mol:protein length:384 NAD/NADP transhydrogenase alpha subunit 1  ali model follow..  22  144AAIHAARLSPR---FFPMLTTAAGTIRPAKVMVMGVGVAGLMAIATAKRLGAQVFAYDVRKAALEQALSLGALTEEEKRIQHEALRDHVAGMDVLITTAQVPGRRAPILLTEDMVERLKPGTVVVDLAAESGGNCVLTKP----GEVVEVRGVRVYGPLNLPSELSVHASEMYAKNLYNLSSLLIEKGAFAPKWEDEIVRAALLMKEGEVLHG 367
5 -52.5001x13_A mol:protein length:401 NAD(P) transhydrogenase subunit alpha  ali model follow..  23  142AIVEAAHEFGRFFTGQI---TAAGKVPPAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQSMGAEFLAFIKAEMELFAAQAKEVDIIVTTALIPGKPAPKLITREMVDSMKAGSVIVDLAAQNGGNCEYT---VPGEIFTTENGVKVIGYTDLPGRLPTQSSQLYGTNLVNLLKLLCKEGNITVDFDDVVIRGVTVIRAGEITWP 370
6 -52.4003p2y_A mol:protein length:381 Alanine dehydrogenase/pyridine nucleotide transhydrogenase  ali model follow..  24  154AVLLGASLSTRFVPM---LTTAAGTVKPASALVLGVGVAGLQALATAKRLGAKTTGYDVRPEVAEQVRSVGAQWLAERAQQQQALEDAITKFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVDLAGETGGNCELTEP----GRTIVHHGVTITSPLNLPATMPEHASELYAKNVTALLDLLLTDDGVAPDFTDEVAASCITRTEGDI... 375
7 -52.1004dio_A mol:protein length:405 NAD(P) transhydrogenase subunit alpha part 1  ali model follow..  25  160AVIDAAYEYDRALPM---MMTAAGTVPAAKIFVMGAGVAGLQAIATARRLGAVVSATDVRPAAKEQVASLGAKFIEYQVKQAALVAEHIAKQDIVITTALIPGRPAPRLVTREMLDSMKPGSVVVDLAVERGGNIEGAEA----GKVTEVGGVRIVGHLNVAGRIAASASLLYAKNLVTFLETMVSKETKALAMEDELVKATALTHGGAVVHP 389
8 -50.5001f8g_A mol:protein length:384 NICOTINAMIDE NUCLEOTIDE TRANSHYDROGENASE  ali model follow..  26  148AVIDGAYEFARAFPM---MMTAAGTVPPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGGKFIEFRKKQAEAVLKELVKTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAVEAGGNCPLSEP----GKIVVKHGVKIVGHTNVPSRVAADASPLFAKNLLNFLTPHVDKDTKTLVMEDETVSGTCVTRDGAIVHP 377
9 -41.6002q99_A mol:protein length:381 Saccharopine dehydrogenase [NAD+, L-lysine-forming  ali model follow..  12  151GAALGVRDWAFKQTHSDDEDLPAVSPYPNEKALVKDVTKDYKEALATGARKPTVLIIGALGRCGSGAIDLLHKKWDIKETSRGGPFDEIPQADIFINCIYLSKPIAPFTNMEKLNNPNRRLRTVVDVSADTTNPHNYTVATVFNKPTVLVPKLSVISIDHLPSLLPREASEFFSHDLLPSLELLPQRK------TAPVWVRAKKLFDRHCARV 375
10 -41.5002qrj_A mol:protein length:394 Saccharopine dehydrogenase, NAD+, L-lysine-forming  ali model follow..  11  154GAALGVRDWAFKQTHSDDEDLPAVSPYPNEKALVKDVTKDYKEALATGARKPTVLIIGALGRCGSGAIDLLHKKWDIKETSRGGPFDEIPQADIFINCIYLSKPIAPFTNMEKLNNPNRRLRTVVDVSADTTNPHNYTVATVFNKPTVAGPKLSVISIDHLPSLLPREASEFFSHDLLPSLELLPQRK------TAPVWVRAKKLFDRHCARV 378
11 -33.1002rir_A mol:protein length:300 Dipicolinate synthase, A chain  ali model follow..  19  136SIPTVEGTIMLAIQHTDYTIHG------SQVAVLGLGRTGMTIARTFAALGANVKVGARSSAHLARITEMGLVPFHT-----DELKEHVKDIDICINTI------PSMILNQTVLSSMTPKTLILDLASRPGG---------TDFKYAEKQGIKALLAPGLPGIVPKTAGQILANVLSKLLAEIQAEE......................... 298
12 -29.9003d4o_A mol:protein length:293 Dipicolinate synthase subunit A  ali model follow..  18  152........................TIHGANVAVLGLGRVGMSVARKFAALGAKVKVGARESDLLARIAEMGMEPFHI-----SKAAQELRDVDVCINTI------PALVVTANVLAEMPSHTFVIDLASKPGG---------TDFRYAEKRGIKALLVPGLPGIVPKTAGRILADVLVKLLAEPS............................ 293
13 -16.1003ic5_A mol:protein length:118 putative saccharopine dehydrogenase  ali model follow..  22  7.............................NICVVGAGKIGQMIAALLKTSSYSVTVADHDLAALAVLNRMGVATKQVDAKDEAGLAKALGGFDAVISAA------PFFLTPIIAKAAKAAGAHYFDLTED................................................................................... 102
14 -15.4003oj0_A mol:protein length:144 Glutamyl-tRNA reductase  ali model follow..  13  11.................IVYDIVRKNGGNKILLVGNGMLASEIAPYFSYPQYKVTVAGRNIDHVRAF----AEKYEYEYVLINDIDSLIKNNDVIITAT----SSKTPIVEERSL---MPGKLFIDLGN----------------PPNIERGNNVITLDEIYEISKKNEML.......................................... 137
15 -15.1004tsk_A mol:protein length:350 Ketol-acid reductoisomerase  ali model follow..  22  15.........................LADKRIAVIGYGSQGHAHAQNLRDSGFDVVIGLRPGSSWAKAEADGFRVMA--------VGEAVEESDVIM--ILLPDERQPAVYEREIRPYLTAGKALAFAH..................................................................................... 107
16 -14.2003evt_A mol:protein length:324 Phosphoglycerate dehydrogenase  ali model follow..  12  134........................TLTGQQLLIYGTGQIGQSLAAKASALGMHVIGVNTTGHPADHFHETVA---------FTATADALATANFIVNAL---TPTTHHLFSTELFQQTKQQPMLINIGVDTTALMTALDHHQLSMAALDVTEPEPLPTDHRDDVLITPHISGQIAHFRATVFPIFAANFAQFVKDGTLVRNQVDLNRG..... 315
17 -14.0001e5l_A mol:protein length:450 SACCHAROPINE REDUCTASE  ali model follow..  12  1.........................MATKSVLMLGSGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHPISLDVNDDAALDAEVAKHDLVISLI------PYTFHATVIKSAIRQKKHVVTTSYVSPAMMELDQAAKDAGITVMNEIGLDPGIDHLYAIKTIEEVHAAGGKIKTFLSYCGGLPAPESSDNLALRNAASFYKDGKVTN. 197
18 -13.8005vg6_A mol:protein length:341 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding  ali model follow..  16  157.........................AAEIRVGVLGLGDLGAAAALELARHGFDVRGWSRTPKALEGVSCFHG---------LEALPGFLAGSEIVVVML---TPETRGLMNAERLAHLPRGAKFINVA--RGPVVDEAALIAALRSGHIAEATLVFEVEPLPVGTPHLASIAIPRTAAPQIVENIRR-----IEAGEPVLNQVDPRRG..... 334
19 -13.7004n18_A mol:protein length:332 D-isomer specific 2-hydroxyacid dehydrogenase family protein  ali model follow..  17  148.........................AADFHIGIMGLGEIGGYIADQLARLGYRVSGWSRSEKQLAGVTCYRG---------EEALDHFLGSLDGLINLL---TAQTRGILAAPLFNRLPAGAVLINCG--RGEHMVNDDVLAALESGQLAGAVLVFPQEPLPADTPHMASAAPAEVIARQLLENIQR-----QRRGLPLKNLVNKHAG..... 325
20 -13.7004zqb_A mol:protein length:316 NADP-dependent dehydrogenase  ali model follow..  14  138.........................PERTTVGVLGLGELGAAAALRLRDAGFDVHGWSRSPKEIAGVTCHAG---------EETLERMLGQVEILVCLL---TGETRGLLDARRLACLPEGAQIVNFA--RGPILDSAALIEALDSGRIGHAVLVFEVEPLPEALPHISAATDPETASAIVGAHVAD-----YRATGRIPPSVDLTRG..... 315
21 -13.7003c24_A mol:protein length:286 Putative oxidoreductase  ali model follow..  14  2..................MVKDKNDVGPKTVAILGAGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQGMGIPLTD--------GDGWIDEADVVVLALPDNIIEK---VAEDIVPRVRPGTIVLILDA.................................................................................... 102
22 -13.6003hg7_A mol:protein length:324 D-isomer specific 2-hydroxyacid dehydrogenase family protein  ali model follow..  14  135......................YQGLKGRTLLILGTGSIGQHIAHTGKHFGMKVLGVSRSGRERAGFDQVYQ---------LPALNKMLAQADVIVSVL---TRETHHLFTASRFEHCKPGAILFNVG--RGNAINEGDLLTALRTGKLGMAVLVFEQEPLPADTPHNSAYSFPDDVAQIFVR-----NYIRFIDGQPLDGKIDFDKG..... 315
23 -13.6003kbo_A mol:protein length:315 Glyoxylate/hydroxypyruvate reductase A  ali model follow..  12  137.........................REEFSVGIMGAGVLGAKVAESLQAWGFPLRCWSRSRKSWPGVESYVG---------REELRAFLNQTRVLINLL---TAQTVGIINSELLDQLPDGAYVLNLA--RGVHVQEADLLAALDSGKLKGAMLVFSQEPLPQETPHIAAVTRPAEAIDYISRTITQ-----LEKGEPVTGQVDRARG..... 314
24 -13.4005w3k_A mol:protein length:340 Ketol-acid reductoisomerase (NADP(+))  ali model follow..  20  15.........................LQGKKIAVVGYGSQGHAHAQNLKDNGYDVVIGIRPGRSFDKAKEDGFDVFP--------VAEAVKQADVIM--VLLPDEIQGDVYKNEIEPNLEKHNALA........................................................................................ 104
25 -13.3004xiy_A mol:protein length:338 Ketol-acid reductoisomerase  ali model follow..  19  11......................LSIIQSKKVAIIGYGSQGHAHACNLKDSGVDVYVGLRAGSASVAKAEAHG-------LTVKSVKDAVAAADVVM--ILTPDEFQGRLYKDEIEPNLKKGATLAFAH..................................................................................... 107
26 -13.2004xdy_A mol:protein length:338 Ketol-acid reductoisomerase  ali model follow..  20  14.........................LRDKTIAVMGYGAQGDAQANCLKDSGINVVIGETEILGGNKNPSWEKAKED----EVLPIDKAAEKGDVVH--ILLPDEVQPAIYENQIKPQLKAGKALCFSH..................................................................................... 112
27 -13.2001np3_A mol:protein length:338 Ketol-acid reductoisomerase  ali model follow..  20  11......................LSIIQGKKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSGSATVAKAEAHG-------LKVADVKTAVAAADVVM--ILTPDEFQGRLYKEEIEPNLKKGATLAFAH..................................................................................... 107
28 -13.2004q39_A mol:protein length:260 PYLD, pyrrolysine synthase  ali model follow..  16  129..............IYAEIASRYLKADSKDVLVVGLGKVGFPGAEHLVQKDFRVYGYDADETLLERATSNLGI--------IPFDPANPKKFSIIFEAT-----PCANTIPEAVL---SENCVLSTPGIPCA................................................................................. 230
29 -13.0005mh5_A mol:protein length:308 D-2-hydroxyacid dehydrogenase  ali model follow..  14  132........................TLAGERVCVVGLGTLGRGVVDRAAALGMEVVGVRRSGDPVDNVSTVYT---------PDRLHEAIADARFVVLAT---TDETEGMVAAPEFETMREDASLVNVAVVESDLVAAEEPLPEDSPLWDFEDVLIT-VSAATSKYHEDVAALIRENIEKIA................................ 298
30 -12.8004yte_A mol:protein length:194 H(2)-forming methylenetetrahydromethanopterin dehydrogenase-related protein MJ0715  ali model follow..  11  7..............GAGNQRLYLEQLK--VPEKFGGEPPYGGAAIEFAKAGHDVVLSEPNRDVMSDDLWK--KVEDAGVKVVSDDIEAAKHGEIHV--LFTPFGRITLNIANTIIEHVPENAIICNTCT.................................................................................... 117
31 -12.8005yeq_A mol:protein length:340 Ketol-acid reductoisomerase (NADP(+))  ali model follow..  20  15.........................IKEKRVAVLGYGSQGRAWALNLRDSGIKVSVGLEREGNSWKQAENDG--------KPLRTEEAVRNSDIII--FLLPDMIQRTVYLERVKPYLKEGMDLVFAH..................................................................................... 108
32 -12.7005bqf_A mol:protein length:322 NADP-dependent 2-hydroxyacid dehydrogenase  ali model follow..  14  140.........................AAEVTVGVMGLGILGQDAVAKLKVMGFNVIGWSRTRKTIEGVETFDA----------GELDRFLAKTDILVGLL---TPETTGFYDSELFKKLRRDGALGQINAGRGKSQIETDIVSAVREGTLGGASLVFEVEPLATDTPHDAAVSEENALFRHVEMQIAR-----FERGEPLQFVIDRAAG..... 321
33 -12.6005t95_A mol:protein length:271 Prephenate dehydrogenase 1  ali model follow..  9  1...................MSTSSSSQSLKIGIVGFGNFGQFLAKTMIKQGHTLTATSRSDYSELCLQM--------IHFFRDVSAFLTADIDVIVLCT--SILSLSEVVGSMPLTSLKRPTLFVDVLSVKEHPRELLLRELPEDSDI---------LCTHPMFGPQTAKNGWTDHTFSNFIQIFATEGCKMVQMSCEEHDRAAAKSQFITH. 188
34 -12.6003abi_A mol:protein length:365 Putative uncharacterized protein PH1688  ali model follow..  17  1..................MNHKVIEGRHMKVLILGAGNIGRAIAWDLKD-EFDVYIGDVNNENLEKVKEFA-TPLKVDASNFDKLVEVMKEFELVIGAL------PGFLGFKSIKAAIKSKVDMVDVSFMPENPLELRDEAEKAQVTIVFDGLSNILMGRIFQELDLKEGYIYVGGLLYYKITWSPRDLI-----EEYTRPARVIRNGKVS.. 192
35 -12.5002axq_A mol:protein length:467 Saccharopine dehydrogenase  ali model follow..  12  15.............................NVLLLGSGFVAQPVIDLAANDDINVTVACRTLANAQALKPSGSKAISLDVTDDSALDKVLADNDVVISLI------PYTFHPNVVKSAIRTKTDVVTSSYISPALRELEPEIVKAGITVMNEIGLDPGIDHLYAVKTIDEVHRAGGKLKSFLSYCGGLPAPEDSDNLALRNSAKYWKDGKIET. 207
36 -12.2004weq_A mol:protein length:341 NAD-dependent dehydrogenase  ali model follow..  11  153.........................AADVTVGIMGMGVLGQDAARKLAAMGFKVIGWSRSKRVIEGVETYDA----------AGLDAFLGRTDFLVGLL---TPDTRGIFNAALFAKLSRNGVFINAG--RGGSQVEADILECLDSGVLGGASLVFEREPLSPETPHVAASSDVRALFVHVEH-----QIARFESGLPLEHVVDKVAG..... 334
37 -12.2004kqw_A mol:protein length:350 Ketol-acid reductoisomerase  ali model follow..  21  25.........................IQGLKVGIIGYGSQGHAHALNLMDSGVDVRVGLREGSSSWKTAEEAG-------LKVTDMDTAAEEADVIM--VLVPDEIQPKVYQEHIAAHLKAGNTLAFAH..................................................................................... 118
38 -12.2001qp8_A mol:protein length:303 FORMATE DEHYDROGENASE  ali model follow..  13  122.........................IQGEKVAVLGLGEIGTRVGKILAALGAQVRGFSRTPK-------------EGPWRFTNSLEEALREARAAVCAL---NKHTRGLVKYQHLALMAEDAVFVNVG--RAEVLDRDGVLRILKERPQFIFASDVWWGRNDFAKDAEFFSLPNVVATPWVAGGYGNERVWRQMVMEAVRNLITYATGG.... 289
39 -12.1004xdz_A mol:protein length:343 Ketol-acid reductoisomerase  ali model follow..  20  15.........................IKNKTIAILGYGSQGRAWALNLRDSGLNVVVGLERQGDSWRRAIDDG--------KPMYTKDAVAIADIIV--FLVPDMVQKSLWLNSVKDFMKKGADLVFAH..................................................................................... 108
40 -12.1003dtt_A mol:protein length:245 NADP oxidoreductase  ali model follow..  20  10........................YFQGMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDPKATLARAEPDAMGAPPFSQWLPAFADVAAGAELVVNATEGASSIA---ALTAAGAENLAGKILVDIA..................................................................................... 118
41 -12.1005hm8_A mol:protein length:498 Adenosylhomocysteinase  ali model follow..  26  259...............HGLFNGCIQMLAGKKIVVLGYGEVGKGCAQGLSGVGARVIVTEIDPICALQASMEG---------QVSVLEDVVSEADIFITAT-----GNKDVITVEHMRKMKENAYIANIG..................................................................................... 358
42 -12.0005l76_A mol:protein length:497 Alpha-aminoadipic semialdehyde synthase, mitochondrial  ali model follow..  11  12NLYFQSMALPDKYKESRERAQSLSMGTRRKVLVLGSGYISEPVLELSRDGNIEITVGSDMKNQIEQLGKKYNPVSMDICKQEEKLGFLVAKQDLVISLL------PYVLHPLVAKACITNKVNMVTASYITPALKELEKSVEDAGITIIGELGLDPGLDHMLAMESIDKAKEVGATIESYISYCGGLPAPEHSNNMNVMQSATYLLDGKVVN. 240
43 -11.9005o4h_A mol:protein length:274 HcgC  ali model follow..  18  33..................IKYFLEGEEFKQAIVFGAYLSGSYIAYSLLKDCEEVIIVDIQPHLKDILFNDGIKFMDLNKLQLELRNGTSINPDLVIDLTGIGG------VSPDLISKFNPKVLIVEDPKGNH................................................................................. 140
44 -11.9003fpe_A mol:protein length:298 Putative uncharacterized protein  ali model follow..  18  122..........................RGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLDGVNVITGDETVIDGLEFDVLMVAALAEPKRR---VFRNIHRYVDTETRII........................................................................................ 219
45 -11.9005t57_A mol:protein length:296 Semialdehyde dehydrogenase NAD-binding protein  ali model follow..  16  18.............................KIALFGAGKMGVRLAKNLLKSDYRVSHVEVSEVGKKRLKDELG-------LECVSTEAALDNVDVVI--LAVPDTIIGKIA-AQIAPQLRPGTMVMTLDA.................................................................................... 108
46 -11.7004ypo_A mol:protein length:333 Ketol-acid reductoisomerase  ali model follow..  21  12.........................IQGRKVGVIGYGSQGHAHSLSLRDSGVQVRVGLKQGSRSRPKVEEQG-------LDVDTPAEVAKWADVVM--VLAPDTAQAEIFAGDIEPNLKPGDALFFGH..................................................................................... 105
47 -11.5002kw5_A mol:protein length:202 Slr1183 protein  ali model follow..  16  18...............NDFLVSVANQIPQGKILCLAEGE-GRNACFLASL-GYEVTAVDQSSVGLAKAKQLAQEKITTVQSNLADFDIVADAWEGIVSIFCHLPSSLRQQLYPKVYQGLKPGGVFIQLQYNTGGPKDLDLLPKLETLQSELPSLNWLIANNLERNLDEGAYHQGKAALIQLLGQ.............................. 193
48 -11.5003gvx_A mol:protein length:290 Glycerate dehydrogenase related protein  ali model follow..  17  120.........................LYGKALGILGYGGIGRRVAHLAKAFGMRVIAYTRSSVD------------QNVDVISESPADLFRQSDFVLIAI---TDKTRGMVNSRLLANARKNLTIVNVA--RADVVSKPDMIGFLK-----ERSDVWYLSDVWWNEPEITETNLRNAILSPHVAGGMSGEIMDIAIQLAFENVRNFFEGE.... 283
49 -11.3003mtg_A mol:protein length:444 Putative adenosylhomocysteinase 2  ali model follow..  21  223.........................FGGKQVVVCGYGEVGKGCCAALKALGAIVYITEIDPICALQACMDG---------RVVKLNEVIRQVDVVITCT-----GNKNVVTREHLDRMKNSCIVCNMGHSN.................................................................................. 315
50 -11.3002ziz_A mol:protein length:495 Adenosylhomocysteinase  ali model follow..  22  273.........................IGGKKVLICGYGDVGKGCAEAMKGQGARVSVTEIDPINALQAMMEG---------DVVTVEEAIGDADIVVTAT-----GNKDIIMLEHIKAMKDHAILGNIG..................................................................................... 362
51 -11.3002ph5_A mol:protein length:480 Homospermidine synthase  ali model follow..  15  15.............................RFVILGFGCVGQALMPLIFE-PSQVTIIAAEGTKVDVAQQYGVSFKLTPQNYLEVIGSTLEENDFLIDVS------IGISSLALIILCNQKGALYINAATEP-NRRTNYSLREEVLRLKDKTQKTALITHGAPGLVSHFIKEALLN...................................... 173
52 -11.3001dxy_A mol:protein length:333 D-2-HYDROXYISOCAPROATE DEHYDROGENASE  ali model follow..  20  142........................ELGQQTVGVMGTGHIGQVAIKLFKGFGAKVIAYDPYPMKGDHPDFDYVS-----------LEDLFKQSDVI--DLHVPIEQNTHIINEAAFNLMKPGAIVINTA--RPNLIDTQ........................................................................... 241
53 -11.3005d4t_A mol:protein length:268 Uncharacterized protein MJ0489  ali model follow..  13  38..................IRDFLEGEEFKEVVIFGVYLWGNYTAQMLSKYADKVYLVDIHEFMKGFVPNNNSIKFLNLNEFKLKFIRGEVNPDLIVDLTGLGG-----IEPEFLAKFNPKVFIVEDPKGVFD................................................................................. 146
54 -11.3005e4r_A mol:protein length:490 Ketol-acid reductoisomerase  ali model follow..  20  15.........................IKNKTIAILGYGSQGRAWALNLRDSGLNVVVGLERQGDSWRRAIDDG-------FKPMYTKDAVAIADIIV--FLVPDMVQKSLWLNSVKDFMKKGADLVFAH..................................................................................... 108
55 -11.3001jax_A mol:protein length:212 conserved hypothetical protein  ali model follow..  13  1............................MRVALLGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASITGMKNEDAAEACDIAVLTIPWEHAIDTA----RDLKNILREKIVVSPL..................................................................................... 97
56 -11.2002fss_A mol:protein length:365 formate dehydrogenase  ali model follow..  18  162........................DIEGKTIATIGAGRIGYRVLERLVPFNPKELLYYDYQALPKDAEEKVG------ARRVENIEELVAQADIVVNAPLHAGTK---LINKELLSKFKKGAWLVNTA--RGAICVFPQPAPKDHPWRDMRNKYGAGNAMTPSGTTLDAQTRYAQGTKNILESFFTGKFDYRPQDIILLNGEYVTK....... 357
57 -11.1005dn9_A mol:protein length:364 FDH  ali model follow..  18  161........................DIEGKTIATIGAGRIGYRVLERLVPFNPKELLYYDYQALPKDAEEKVG------ARRVENIEELVAQADIVINAPLHAGTK---LINKELLSKFKKGAWLVNTA--RGAICVFPQPAPKDHPWRDMRNKYGAGNAMTPSGTTLDAQTRYAEGTKNILESFFTGKFDYRPQDIILLNGEYITK....... 356
58 -11.1006f3n_A mol:protein length:472 Adenosylhomocysteinase  ali model follow..  16  222.........................LSGKQALVIGYGDVGKGSSQSLRQEGMIVKVAEVDPICAMQACMDGFEVVSPYKNEASIDAALLGKIDLIVTTT-----GNVNVCDANMLKALKKRAVVCNIG..................................................................................... 325
59 -11.1003l6d_A mol:protein length:306 Putative oxidoreductase  ali model follow..  18  1...................MSLSDESFEFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSPGKAAALVAAGAHLCESV-------KAALSASPATI-FVLLDNHATHEVLGMPGVARALAHRTIVDYTT.................................................................................... 102
60 -11.1004xkj_A mol:protein length:335 D-lactate dehydrogenase  ali model follow..  16  142........................EIRSLTVGIIGAGRIGGTVARLFKALGATVIANDIVERVELKDIVTYVS-----------KEELLQAADVV--TLHVPMDSTTQLIDADALALMKNDAVLINASVDTDALIAALQNKQNGEEHFFNQDLCLRTLPNV-GFYTNKAVQNMVEISLNDVLAILKTGTSEHQLNKVAVEN............ 335
61 -11.1004lvc_A mol:protein length:479 S-adenosyl-L-homocysteine hydrolase (SAHase)  ali model follow..  22  258.........................LSGKVAMVAGFGDVGKGSAASLRQAGCRVMVSEVDPICALQAAMEG---------EVVTMEDAAPRADIFVTAT-----GNKDIITIEHMRAMKDRAIVCNIG..................................................................................... 347
62 -11.1004oaq_A mol:protein length:367 R-specific carbonyl reductase  ali model follow..  14  161...YGAPLMCAGITVFSPLIRNLGLDARGKVGIIGIGGLGHLALQFANAMGANVTAFSRSSSKKEQAMKLGAHDFVATGEDKTWYKNYDDHFDFILNCASGIDGLN-----SEYLSTLKVDKKFVSVGLPPSEDKFEVSPFTFLQQGASFGSSLLGSKTEVKEMLNLAAKHNVRPMIEEVISEENCAKALDRCHAGDVRYRFVFTDFDK.... 364
63 -11.0001xdw_A mol:protein length:331 NAD+-dependent (R)-2-Hydroxyglutarate Dehydrogenase  ali model follow..  27  143........................EVRNCTVGVVGLGRIGRVAAQIFHGMGATVIGEDVFEIKGIEDYCTQVS-----------LDEVLEKSDII--TIHAPIKENGAVVTRDFLKKMKDGAILVNCA--RGQLVDTE........................................................................... 242
64 -11.0004yt4_A mol:protein length:375 H(2)-forming methylenetetrahydromethanopterin dehydrogenase-related protein MJ1338  ali model follow..  11  7...IKVDNMKVSVYGAGNQNLYINKLN--LPEKFGGEPPYGGSAIEFAEAGHDVVLAEPNKNIMSDDLWK--KVEDAGVKVVSDDVEAAKHGEIHV--LFTPFGKATFRIAKTIIEHVPENAVICNTCTVSPVVLYYSLEPILR---TKRKDVGISSMHPAAVPGTPQHGHYVTEEQIKKAVELAKSAGKEAYVVPADVSSVVADMGSLVTA. 220
65 -11.0003ond_A mol:protein length:488 Adenosylhomocysteinase  ali model follow..  20  253...............DGLMRATDVMIAGKVAVVAGYGDVGKGCAAALKQAGARVIVTEIDPICALQATMEG---------QVLTLEDVVSEADIFVTTT-----GNKDIIMLDHMKKMKNNAIVCNIG..................................................................................... 352
66 -11.0001j49_A mol:protein length:333 D-LACTATE DEHYDROGENASE  ali model follow..  20  143........................EVRDQVVGVVGTGHIGQVFMQIMEGFGAKVITYDIFRN----------PELEKKGYYVDSLDDLYKQADVI--SLHVPVPANVHMINDESIAKMKQDVVIVNVS--RGPLVDTD........................................................................... 243
67 -11.0002yq4_A mol:protein length:343 D-ISOMER SPECIFIC 2-HYDROXYACID DEHYDROGENASE  ali model follow..  20  145........................EIYNLTVGLIGVGHIGSAVAEIFSAMGAKVIAYDVAYNPEFEPFLTYTD-----------FDTVLKEADIV--SLHTPFPSTENMIGEKQLKEMKKSAYLINCA--RGELVDTG........................................................................... 244
68 -10.9005v96_A mol:protein length:480 S-adenosyl-l-homocysteine Hydrolase  ali model follow..  20  254.........................LAGKECVICGFGDVGKGCAEALKGQGARVIVTEIDPINALQACMAG---------TVKTVEDCLATADIYVTAT-----GNKDIITLDHMKKMKDMAIICNIG..................................................................................... 343
69 -10.9002dld_A mol:protein length:337 D-LACTATE DEHYDROGENASE  ali model follow..  19  143........................EVRDQVVGVVGTGHIGQVFMRIMEGFGAKVIAYDIFKN----------PELEKKGYYVDSLDDLYKQADVI--SLHVPVPANVHMINDKSIAEMKDGVVIVNCS--RGRLVDTD........................................................................... 243
70 -10.9004prk_A mol:protein length:336 4-phosphoerythronate dehydrogenase  ali model follow..  20  143........................EIYNKTIGLIGVGHIGSAVAQIFSAMGAKVLAYDVIYNPEVEPYLTYAD-----------FDTVLKEADII--SLHTPLKSTENMIGKKQFAEMKNDAILINAA--RGELVDTA........................................................................... 242
71 -10.8004dyd_A mol:protein length:283 Diketoreductase  ali model follow..  20  6.............................NVTVLGTGVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKRFEGLAAVYEKEVDDLAQAVKDADLVIEAVP-ESLDLKRDIYTKLGELAPAKTIFADLVGYTG--AEVMGTTKTDPEVYQQVVEFASAIGMVPIELKKEKAGYVLNSLLVPLLDLLVDGIADPETIDKTWRIGTGAPKGPF... 233
72 -10.8004dll_A mol:protein length:320 2-hydroxy-3-oxopropionate reductase  ali model follow..  19  27.............................KITFLGTGSMGLPMARRLCEAGYALQVWNRTPARAASLAALGATIHEQA-------RAAARDADIVVSMLENGAVVQDVLFAQGVAAAMKPGSLFLDMAS.................................................................................... 119
73 -10.8002vns_A mol:protein length:215 METALLOREDUCTASE STEAP3  ali model follow..  18  29............................PKVGILGSGDFARSLATRLVGSGFKVVVGSRNPKRTARLFPSAAQ--------VTFQEEAVSSPEVIFVAVFREHYSSLCSLSDQL-----AGKILVDVS..................................................................................... 115
74 -10.8002yjz_A mol:protein length:201 METALLOREDUCTASE STEAP4  ali model follow..  15  11...................LTVDSSEKQGVVCIFGTGDFGKSLGLKMLQCGYSVVFGSRNPQVSSLLPR---------GAEVLCYSEAASRSDVIVLAVHREHYDFLAELADSL-----KGRVLIDVS..................................................................................... 105
75 -10.8003rqs_A mol:protein length:324 Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial  ali model follow..  19  5.MAFVTRQFMRSVSSSSTASASAKKIIVKHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEESLRKVAKKSTDAASVVHSTDLVVEAIVENLKVKNELFKRTIFASNTSSLQITSIANATT--VEVIKTPMTSQKTFESLVDFSKALGKHPVSCKDTPGFIVNRLLVPYLMELYERGDASKEDIDTAMKLGAGYPMGPF... 263
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 1 0 7   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Friedberg I, Godzik A. Fragnostic: walking through protein structure space. Nucleic Acids Res. 2005 Jul 1;33(Web Server issue):W249-51.