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Query: PF03519.14; W0HTY6_9GAMM/17-94; Invasion protein B family, from PfamA32U

Results of FFAS03 search in PDB1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .
# Score Template Links and tools%idFirst GCDPSLLGNFDSHSTIALDFNDMPSIYISSSDDDIWLWSRIAEYQDTILEQCSYNLLKELLEGAEYIRGGHFSLAENELast
1 -43.8002fm8_A mol:protein length:135 Surface presentation of antigens protein spaK  ali model follow..  46  18GCDPSLIGGIDSHSTIVLDLFALPSICISVKDDDVWIWAQLGADSMVVLQQRAYEILMTIMEGCHFARGGQLLLGEQN 95
2 -43.7001ry9_A mol:protein length:145 Surface presentation of antigens protein spaK  ali model follow..  29  24GCPPSIITDLDSHSAITISLDSMPAINIALVNEQVMLWANFDAPSDVKLQSSAYNILNLMLMNFSYSINELVELHRSD 101
3 -40.4002xga_A mol:protein length:153 SURFACE PRESENTATION OF ANTIGENS PROTEIN SPAK  ali model follow..  29  32GCPPSIITDLDSHSAITISLDSMPAINIALVNEQVMLWANFDAPSDVKLQSSAYNILNLMLMNFSYSINELVELHRSD 109
4 -9.2801jyo_A mol:protein length:130 SicP  ali model follow..  15  20........TFDDNNQCLLLLDSDIFTSIEAKDDIWLLNGMIIPLSPVCGDSIWRQIMVI................... 70
5 -7.2003c0u_A mol:protein length:183 Uncharacterized protein yaeQ  ali model follow..  15  63.................LCADDEPEAWLRNDHLGIDLWIELGLPDERRIKKACTQAAEVAL................. 106
6 -7.0602g3w_A mol:protein length:182 hypothetical protein XAC2396  ali model follow..  13  61.................LSNDDEPDLWRRDYTGDPDLWIDLGQPDESRVRKACNRSREAVV................. 104
7 -7.0102ot9_A mol:protein length:180 Hypothetical protein  ali model follow..  25  61.................LSDVDEPALWEKSLDDRVLHWIEVGQPDADRLTWCSRRTERTSL................. 104
8 -6.6901xkp_C mol:protein length:143 Chaperone protein yscB  ali model follow..  13  18........VADKQGVYRLTIDKH-LVMLAPHGSELVLRTPIDAPMLREGNNVNVTLLRSLMQ................ 70
9 -6.2302cio_B mol:protein length:121 INHIBITOR OF CYSTEINE PEPTIDASE  ali model follow..  18  1.MSHNLFTEEDNNKTIRMVIGETFTIELESNPTTGYTWL....................................... 38
10 -6.1603odt_A mol:protein length:313 Protein DOA1  ali model follow..  10  214..TGDVLRTYEGHESFVYCIKLLPNIVSCGEDRTVRIWSKENGSLKQVITLPAISIWSVDCMS-----NGDIIVGSSD 286
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 0 6 6   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Pawlowski K, Pio F, Chu Z, Reed JC, Godzik A. PAAD - a new protein domain associated with apoptosis, cancer and autoimmune diseases. Trends Biochem Sci. 2001 Feb;26(2):85-7.