Scheduled maintenance will begin on May 30th, 2025. Server will be temporarily unavailable — learn more.
current user: public
If you have questions about the server, please let us know.

Query: PF07476.11; A8AJ73_CITK8/162-410; Methylaspartate ammonia-lyase C-terminus, from PfamA32U

Results of FFAS03 search in PDB1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .  130    .  140    .  150    .  160    .  170    .  180    .  190    .  200    .  210    .  220    .  230    .  240    .
# Score Template Links and tools%idFirst CVPEAIPLFGQSGDDRYIAVDKMILKGVDVLPHALINNVEEKLGFQGEKLREYVRWLSDRILSLRTSPRYHPTLHIDVYGTIGLIFDMDPVRCAEYIASLEKEAQGLPLYIEGPVDAGNKPDQIRLLTAITKELTRLGSGVKIVADEWCNTYQDIVDFTDAGSCHMVQIKTPDLGGIHNIVDAVLYCNKHGMEAYQGGTCNETEISARTCVHVALAARPMRMLVKPGMGFDEGLNIVFNEMNRTIALLQLast
1 -76.5001kko_A mol:protein length:413 3-METHYLASPARTATE AMMONIA-LYASE  ali model follow..  98  163.VPEAIPLFGQSGDDRYIAVDKMILKGVDVLPHALINNVEEKLGFKGEKLREYVRWLSDRILSLRSSPRYHPTLHIDVYGTIGLIFDMDPVRCAEYIASLEKEAQGLPLYIEGPVDAGNKPDQIRMLTAITKELTRLGSGVKIVADEWCNTYQDIVDFTDAGSCHMVQIKTPDLGGIHNIVDAVLYCNKHGMEAYQGGTCNETEISARTCVHVALAARPMRMLIKPGMGFDEGLNIVFNEMNRTIALLQ 410
2 -72.8003zvh_A mol:protein length:438 METHYLASPARTATE AMMONIA-LYASE  ali model follow..  55  163.EINAVPVFAQSGDDRYDNVDKMIIKEADVLPHALINNVEEKLGLKGEKLLEYVKWLRDRIIKLRVREDYAPIFHIDVYGTIGAAFDVDIKAMADYIQTLAEAAKPFHLRIEGPMDVEDRQKQMEAMRDLRAELDGRGVDAELVADEWCNTVEDVKFFTDNKAGHMVQIKTPDLGGVNNIADAIMYCKANGMGAYCGGTCNETNRSAEVTTNIGMACGARQVLAKPGMGVDEGMMIVKNEMNRVLALVG 410
3 -56.3003jva_A mol:protein length:354 Dipeptide Epimerase  ali model follow..  18  112.QKAQLPLYQLLGGYDNQDEPNVMAQKAVEKVKLGFDTLKIKVGTG-------IEADIARVKAIREAVGFDIKLRLDAN------QAWTPKDAVKAIQALADYQ---IELVEQPVKRRDLEGLKYV---------TSQVNTTIMADESCFDAQDALELVKKGTVDVINIKLMKCGGIHEALKINQICETAGIECMIGCMAEETTIGITAAAHLAAAQKNITRADLDATFGLETAPVTGGVSLEAKPLLE 343
4 -55.4003q45_A mol:protein length:368 Mandelate racemase/muconate lactonizing enzyme family; possible chloromuconate cycloisomerase  ali model follow..  16  112.QHAGLPLYAFLGGKKDKIIQHKMAADAVQIKKNGFEIIKVKVGGS-------KELDVERIRMIREAAGDSITLRIDAN------QGWSVETAIETLTLLEPYN---IQHCEEPVSRNLYTALPKI---------RQACRIPIMADESCCNSFDAERLIQIQACDSFNLKLSKSAGITNALNIIRLAEQAHMPVQV-GGFLESRLGFTAAAHVALVSKTICYYDFDTPLMFEADPVRGGIVYQQRGIIE 343
5 -53.7001jpm_A mol:protein length:366 L-Ala-D/L-Glu Epimerase  ali model follow..  15  113.QMCGLPLYQMLGGYRDTNSPEEMAADAENYLKQGFQTLKIKVGKD------DIATDIARIQEIRKRVGSAVKLRLDAN------QGWRPKEAVTAIRKMEDAG-LGIELVEQPVHKDDLAGLKKV---------TDATDTPIMADESVFTPRQAFEVLQTRSADLINIKLMKAGGISGAEKINAMAEACGVECMV-GSMIETKLGITAAAHFAASKRNITRFDFDAP-LMLKTDVFNGGITYSGSTIS 345
6 -53.3002ozt_A mol:protein length:332 Tlr1174 protein  ali model follow..  15  104.RVRPWPICALLGS------GQAALEQWQQSWQRGQTTFKWKVG------VMSPEEEQAILKALLAALPPGAKLRLDANG------SWDRATANRWFAWLDRHGNGKIEYVEQPLPPDQWQALLSL---------AQTVTTAIALDESVVSAAEVQRWVDRGWPGFFVIKTALFGDP-DSLSLLLRRGLEPQRLVF-SSALEGAIARTAIFHLLETWQPCHALGFGVDRWRSAPLL............. 309
7 -53.2001muc_A mol:protein length:373 MUCONATE LACTONIZING ENZYME  ali model follow..  16  118.KRLGLPVSELLGGRVRDSLERDIAEARHMLEIRRHRVFKLKIGANP------VEQDLKHVVTIKRELGDSASVRVDVNQ------YWDESQAIRACQVLGDNG---IDLIEQPISRINRGGQVRL---------NQRTPAPIMADESIESVEDAFSLAADGAASIFALKIAKNGGPRAVLRTAQIAEAAGIGLYG-GTMLEGSIGTLASAHAFLTLRQLTWGTELFGPLLLTEEIVNEPPQYRDFQLH 351
8 -52.9001nu5_A mol:protein length:370 Chloromuconate cycloisomerase  ali model follow..  16  114.RALNLSIADLIGGTMRTSIPRDIDSALEMIETRRHNRFKVKLGAR------TPAQDLEHIRSIVKAVGDRASVRVDVNQ------GWDEQTASIWIPRLEEAG---VELVEQPVPRANFGALRRL---------TEQNGVAILADESLSSLSSAFELARDHAVDAFSLKLCNMGGIANTLKVAAVAEAAGISSYG-GTMLDSTVGTAAALHVYATLPSLPYGCELIGPWVLGDRLTQQDLEIKDFEVH 347
9 -52.6002chr_A mol:protein length:370 CHLOROMUCONATE CYCLOISOMERASE  ali model follow..  18  114.RALGVSIAELLGGPLRSAIPRDLDSAVEMIERRRHNRFKVKLGFR------SPQDDLIHMEALSNSLGSKAYLRVDVNQ------AWDEQVASVYIPELEALG---VELIEQPVGRENTQALRRL---------SDNNRVAIMADESLSTLASAFDLARDRSVDVFSLKLCNMGGVSATQKIAAVAEASGIASYG-GTMLDSTIGTSVALQLYSTVPSLPFGCELIGPFVLADTLSHEPLEIRDYELQ 347
10 -52.5003ct2_A mol:protein length:382 Muconate cycloisomerase  ali model follow..  16  120.KRLGLPVSELLGGRVRDALPKDIAEAQKMLDLRRHRIFKLKIGAG------EVDRDLAHVIAIKKALGDSASVRVDVNQ------AWDEAVALRACRILGGNG---IDLIEQPISRNNRAGMVRL---------NASSPAPIMADESIECVEDAFNLAREGAASVFALKIAKNGGPRATLRTAAIAEAAGIGLYG-GTMLEGGIGTLASAHAFLTLNKLSWDTELFGPLLLTEDILAEPPVYRDFHLH 353
11 -52.5002zad_A mol:protein length:345 Muconate cycloisomerase  ali model follow..  14  112.QELGTQVCYLLGGKRDEDTVENRVKEAKKIFEEGFRVIKIKVGEN-------LKEDIEAVEEIAKVTR-GAKYIVDAN------MGYTQKEAVEFARAVYQKG-IDIAVYEQPVRREDIEGLKFV---------RFHSPFPVAADESARTKFDVMRLVKEEAVDYVNIKLMK-SGISDALAIVEIAESSGLKLMI-GCMGESSLGINQSVHFALGTGAFEFHDLDSHLMLKEEVF............. 329
12 -52.5003rit_A mol:protein length:356 Dipeptide epimerase  ali model follow..  17  113.QCLGLPLVEILGRAHDSKPVEETLAEAREHLALGFRVLKVKLCGD-------EEQDFERLRRLHETLAGRAVVRVDPN------QSYDRDGLLRLDRLVQELG---IEFIEQPFPAGRTDWLRAL---------PKAIRRRIAADESLLGPADAFAAAPPAACGIFNIKLMKCGGLAPARRIATIAETAGIDLMW-GCMDESRISIAAALHAALACPATRYLDLDGSFDLARDVA............. 331
13 -52.4003r0k_A mol:protein length:379 Enzyme of enolase superfamily  ali model follow..  16  115.KEQDISVAKLLGAKANSGNVAETIQNIQNGVEANFTAIKVKTGAD-------FNRDIQLLKALDNEFSKNIKFRFDAN------QGWNLAQTKQFIEEINKYSL-NVEIIEQPVKYYDIKAMAEI---------TKFSNIPVVADESVFDAKDAERVIDEQACNMINIKLAKTGGILEAQKIKKLADSAGISCMV-GCMMESPAGILATASFALA................................. 314
14 -52.1003i4k_A mol:protein length:383 Muconate lactonizing enzyme  ali model follow..  14  120.RSLNVPVRDLLGGTVRDKVDVAVAEIEERIEEFGNRSFKLKMGAG------DPAEDTRRVAELAREVGDRVSLRIDINA------RWDRRTALHYLPILAEAG---VELFEQPTPADDLETLREI---------TRRTNVSVMADESVWTPAEALAVVKAQAADVIALKTTKHGGLLESKKIAAIAEAGGLACHG-ATSLEGPIGTAASLQFAASTKAISYGTELFGPQLLKDTYIVQEFEYKDGQVA 353
15 -52.1004m0x_A mol:protein length:371 Chloromuconate cycloisomerase  ali model follow..  15  117.RRSRIPVSDLLGGLRRKRIPSDLIDEAAQKLDVGHRSFKFKMGAEP------ADTDSRRVLDVLECIPDECAVIVDPNG------RWSELEAHRWLPILADAG---VTVAEQPIARWNTDGLARL---------RDKLSIPIMADESVTTVQQAIALADAGAVSAFAIKIPKSGGLSRAREIAAIAEASGLACFG-AATPESSVMGAISAQLYGTMPDLSVGCELFGPGLLIDEVVTEPLKYDRGELL 349
16 -52.1002opj_A mol:protein length:327 O-succinylbenzoate-CoA synthase  ali model follow..  17  66.VRDTVPVNATVP--------VGPEEAARIVASSGCTTAKVKVAERGQ----SEANDVARVEAVRDALGPRGRVRIDVNG------AWDVDTAVRMIRLLDRFE---LEYVEQPCATVD-------------AEVRRRVSVPIAADESIRRAEDPLRVRDAEAADVVVLKVQPLGGVRAALRL---AEECGLPVVV-SSAVETSVGLAAGVALAAALPELPYACGLATLRLLHADVCDDPLL....... 271
17 -51.7003fcp_A mol:protein length:381 L-Ala-D/L-Glu epimerase, a muconate lactonizing enzyme  ali model follow..  17  119.KALGLPVSALLGGALQTALPKDIAEGEKLLAEGRHRAFKLKIGAR------ELATDLRHTRAIVEALGDRASIRVDVNQ------AWDAATGAKGCRELAAMG---VDLIEQPVSAHDNAALVRL---------SQQIETAILADEAVATAYDGYQLAQQGFTGAYALKIAKAGGPNSVLALARVAQAAGIGLYG-GTMLEGTVGTVASLHAWSTLPLQWGTEMFGP-LLLKDDIVSVPLTFADGQVA 351
18 -50.9003s5s_A mol:protein length:389 Mandelate racemase/muconate lactonizing enzyme family protein  ali model follow..  14  117.KRAGMPLWAFFGGSGTAGSPERAEEAARRAAAMGFRALKVKVGGR------LAASDPARIEAIHAA-APGASLILDGN------GGLTAGEALALVAHARRLGA-DVALLEQPVPRDDWDGMKEV---------TRRAGVDVAADESAASAEDVLRVAAERAATVVNIKLMK-GGIAEALDIAAVARAAGLGLMI-GGMVESVLAMTASACFAAGLGGFSFVDLDTPLFLAENPF............. 335
19 -50.9002qde_A mol:protein length:397 Mandelate racemase/muconate lactonizing enzyme family protein  ali model follow..  17  117.KRFGVPVYQLLGGKTIERIPEAVAEEALAVLREGFHFVKLKAGGP-------LKADIAMVAEVRRAVGDDVDLFIDING------AWTYDQALTTIRALEKYN---LSKIEQPLPAWDLDGMARL---------RGKVATPIYADESAQELHDLLAIINKGAADGLMIKTQKAGGLLKAQRWLTLARLANLPVIC-GCMVGSGLEASPAAHLLAANDWIAQFP......................... 323
20 -50.9003my9_A mol:protein length:377 Muconate cycloisomerase  ali model follow..  12  118.KATGLSVADLLGGRVRDRIPDADLERMRAMVPAGHTVFKMKTGVKP------HAEELRILETMRGEFGERIDLRLDFNQ------ALTPFGAMKILRDVDAFR---PTFIEQPVPRRHLDAMAGF---------AAALDTPILADESCFDAVDLMEVVRRQAADAISVKIMKCGGLMKAQSLMAIADTAGLPGYG-GTLWEGGIALAAGTQLIAATPGISLGEFYMPHHVLTEDVLEERIANSAGHVI 351
21 -50.8002p88_A mol:protein length:369 Mandelate racemase/muconate lactonizing enzyme family protein  ali model follow..  16  113.KKLNQPVYQLIGGRYHEEFPENMAEEAASMIQKGYQSFKMKVGTN-------VKEDVKRIEAVRERVGNDIAIRVDVNQGWK-----NSANTLTALRSLGHLN---IDWIEQPVIADDIDAMAHI---------RSKTDLPLMIDEGLKSSREMRQIIKLEAADKVNIKLMKCGGIYPAVKLAHQAEMAGIECQV-GSMVESSVASSAGFHVAFSKKIITSVELTG...................... 323
22 -50.8003u9i_A mol:protein length:393 Mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein  ali model follow..  14  132.RRARLPLWAFFGGAATSGSVTAAARAAQAIVARGVTTIKIKIGAGDPTTIRTMEHDLARIVAIRD-VAPTARLILDGN------CGYTAPDALRLLDMLGVHGI-VPALFEQPVAKDDEEGLRRL---------TATRRVPVAADESVASATDAARLARNAAVDVLNIKLMK-CGIVEALDIAAIARTAGLHLMI-GGMVESLLAMTVSACFAAGQGGFRFVDLDTP-LFLAENPFDGGMTYHGGTID 370
23 -50.7003ik4_A mol:protein length:365 Mandelate racemase/muconate lactonizing protein  ali model follow..  13  116.RHYHMPLHVFFGGVSKQGDEVHAAASAKAILARGIKSIKVKTAG------VDVAYDLARLRAIHQA-APTAPLIVDGN------CGYDVERALAFCAACKAESI-PMVLFEQPLPREDWAGMAQV---------TAQSGFAVAADESARSAHDVLRIAREGTASVINIKLMK-AGVAEGLKMIAIAQAAGLGLMI-GGMVESILAMSFSANLAAGNGGFDFIDLDTPLFIAEHPF............. 334
24 -50.2003mwc_A mol:protein length:400 Mandelate racemase/muconate lactonizing protein  ali model follow..  13  120.KKNKISLKAMIEKKMKNLGVETLIHQVEESLQEGYRRIKIKIKPG---------WDVEPLQETRRAVGDHFPLWTDANSSFE----------LDQWETFKAMDAAKCLFHEQPLHYEALLDLKEL---------GERIETPICLDESLISSRVAEFVAKLGISNIWNIKIQRVGGLLEAIKIYKIATDNGIKLWG-GTMPESGLGARFLISLASFRGFVFPADVAASEKWYGKGNDLVENTMTDGKIY 363
25 -49.9001jpd_X mol:protein length:324 L-Ala-D/L-Glu Epimerase  ali model follow..  18  104.RRQQQSLADLIGITLPETVIDQMANSASTLWQAGAKLLKVKLDNH---------LISERMVAIRTAV-PDATLIVDAN------ESWRAEGLAARCQLLADLG---VAMLEQPLPAQDDAALENFIHPL-----------PICADESCHTRSNLKALK--GRYEMVNIKLDKTGGLTEALALATEARAQGFSLML-GCMLCTSRAISAALPLVPQVS............................... 297
26 -49.8003qld_A mol:protein length:388 Mandelate racemase/muconate lactonizing protein  ali model follow..  15  121.ARTGQPLVGLLGGGRDRESLDVLIQSVDAAVEQGFRRVKLKIAPG---------RDRAAIKAVRLRYP-DLAIAADANG------SYRPEDAP----VLRQLDAYDLQFIEQPLPEDDWFDLAKL---------QASLRTPVCLDESVRSVRELKLTARLGAARVLNVKPGRLGGFGATLRALDVAGEAGMAAWV-GGMYETGVGRVHGLIAAALPLMRYATDLGPSDRYFEQDVLKEPIA....... 341
27 -49.8002zc8_A mol:protein length:369 N-acylamino acid racemase  ali model follow..  15  113.KALGRPLWQVLGGVRQAPSVEDTLRVVERHLEEGYRRIKLKIKPG---------WDYEVLKAVREAFP-EATLTADANS------AYSLANLAQ----LKRLDELRLDYIEQPLAYDDLLDHAKL---------QRELSTPICLDESLTGAEKARKAIELGAGRVFNVKPARLGGHGESLRVHALAESAGIPLWM-GGMLEAGVGRAHNLHLATLPGFTKPGDVSSASRYWEEDIVEEALEAKDGLMP 340
28 -49.8001r0m_A mol:protein length:375 N-acylamino acid racemase  ali model follow..  13  120.RTLGVPLGTLLGGHKEQADEQATVDLVRRHVEQGYRRIKLKIKPG---------WDVQPVRATREAFP-DIRLTVDANS------AYTLADAGR----LRQLDEYDLTYIEQPLAWDDLVDHAEL---------ARRIRTPLCLDESVASASDARKALALGAGGVINLKVARVGGHAESRRVHDVAQSFGAPVWC-GGMLESGIGRAHNIHLSTLSNFRLPGDTSSASRYWERDLIQEPLEAVDGLMP 347
29 -49.7001sja_A mol:protein length:368 N-acylamino acid racemase  ali model follow..  14  113.RAHERSFAAELGSVRDSDTIPQLLDVVGGYLDEGYVRIKLKIEPG---------WDVEPVRAVRERFGDDVLLQVDANT------AYTLGDAPQ----LARLDPFGLLLIEQPLEEEDVLGHAEL---------ARRIQTPICLDESIVSARAAADAIKLGAVQIVNIKPGRVGGYLEARRVHDVCAAHGIPVWC-GGMIETGLGRAANVALA-SLPNFTLPGDTSASDRFYKTDITEPFVLSGGHLP 340
30 -49.6001wuf_A mol:protein length:393 hypothetical protein lin2664  ali model follow..  15  123.KMEKRSLAKMIGATKESQNVETLLQLVNQYVDQGYERVKLKIAPN---------KDIQFVEAVRKSFP-KLSLMADANS------AYNREDFL----LLKELDQYDLEMIEQPFGTKDFVDHAWL---------QKQLKTRICLDENIRSVKDVEQAHSIGSCRAINLKLARVGGMSSALKIAEYCALNEILVWC-GGMLEAGVGRAHNIALAARNEFVFPGDISASNRFFAEDIVTPAFELNQGRLK 350
31 -49.6005fjr_A mol:protein length:368 O-SUCCINYLBENZOATE SYNTHASE  ali model follow..  14  113.RAHERSFAAELGSVRDSDTIPQLLDVVGGYLDEGYVRIKLKIEPG---------WDVEPVRAVRERFGDDVLLQVDANT------AYTLGDAPQ----LARLDPFGLLLIEQPLEEEDVLGHAEL---------ARRIQTPICLDESIVSARAAADAIKLGAVQIVNIKPGRVGGYLEARRVHDVCAAHGIPVWC-GDMIETGLGRAANVALA-SLPNFTLPGDTSASDRYYKTDITEPFVLSGGHLP 340
32 -49.6001wue_A mol:protein length:386 mandelate racemase/muconate lactonizing enzyme family protein  ali model follow..  15  123.KRQQKSLTEFFGPTRRKEDLPQLLKQVQLAVEKGYQRVKLKIRPG---------YDVEPVALIRQHFP-NLPLMVDANS------AYTLADLPQ----LQRLDHYQLAMIEQPFAADDFLDHAQL---------QRELKTRICLDENIRSLKDCQVALALGSCRSINLKIPRVGGIHEALKIAAFCQENDLLVWL-GGMFESGVGRALNLQFASQPTFSFPGDISATERYFYEDIITEPFILEQGTMT 350
33 -49.5002pge_A mol:protein length:377 MenC  ali model follow..  13  148.GEKRIPVNGLIW----MGEAAFMQEQIEAKLAEGYGCLKLKIGA------IDFDKECALLAGIRESFSPQLEIRVDANG------AFSPANAPQRLKRLSQFH---LHSIEQPIRQHQWSEMAAL---------CANSPLAIALDEELIGLGAEQRSAMLDAPQYIILKPSLLGGFHYAGQWIELARERGIGFWI-TSALESNLGLAAIAQWTALYQPTMPQGLGTG------QLYTNNLPSNLAVDG 363
34 -49.4004mgg_A mol:protein length:369 Muconate lactonizing enzyme  ali model follow..  14  117.KATGQPLYTLLGGAAQDDVPEIMAKKIEGYAAEGYTKFQLKVGGD-------ANDDINRIHATRSVLKKSDLLVADANT------GWTRHEAARVVGAVSSLD----VYIEQPCLTYE-----------ESVSIRRRTALPFVLDEVIDGPNTLVRGIAEDAMDCINLKISKVGGLTKAKLMRDLCIAHGIPMTI-EDTWGGDIVTAAIAHLARSTPSEFTFSATDFNSYGTVDIAEGAPKRVNGRMT 345
35 -49.3003i6e_A mol:protein length:385 Muconate cycloisomerase I  ali model follow..  16  120.RISNLPVWALLGGKCRDTIPDADIALMERLRADGVGLIKLKTGFR------DHAFDIMRLELIARDFP-EFRVRVDYNQ------GLEIDEAVPRVLDVAQFQ---PDFIEQPVRAHHFELMARL---------RGLTDVPLLADESVYGPEDMVRAAHEGICDGVSIKIMKSGGLTRAQTVARIAAAHGLMAYG-GDMFEAGLAHLAGTHMIAATPEITLGEFYQASYFLNEDILETPFRVEAGQVI 352
36 -49.2002pgw_A mol:protein length:384 Muconate cycloisomerase  ali model follow..  16  119.KLAGLPVHQLLGGAHRKAVAEELARDAAVGHAQGERVFYLKVGRG-------EKLDLEITAAVRGEIG-DARLRLDANE------GWSVHDAINMCRKLEKYD---IEFIEQPTVSWSIPAMAHV---------REKVGIPIVADQAAFTLYDVYEICRQRAADMICIGPREIGGIQPMMKAAAVAEAAGLKICI-HSSFTTGITTCAEHHIGLAIPNLDDGNQIMWQLVQEDIVSSPDLTPKNGWLD 349
37 -49.1002pce_A mol:protein length:386 putative mandelate racemase/muconate lactonizing enzyme  ali model follow..  13  117.QAAGLPLCDMTGGRVAGPVPEAMRAKVARHRAQGFKGHSIKIGASEAE--GGPALDAERITACLADRQPGEWYLADANN------GLTVEHALRMLSLLPPGL---DIVLEAPCA--SWAETKSL---------RARCALPLLLDELIQTETDLIAAIRDDLCDGVGLKVSKQGGITPMLRQRAIAAAAGMVMSV-QDTVGSQISFAAILHLAQSTPRHLLRCALDTRAMTTAELAEIDAPLRDGGAS 351
38 -49.1003dg3_A mol:protein length:367 Muconate cycloisomerase  ali model follow..  15  112.QSLRLSVSEMLGGYTDRDPVKMVAEAERIRETYGINTFKVKVGRRP------VQLDTAVVRALRERFGDAIELYVDGN------RGWSAAESLRAMREMADLD---LLFAEELCPADDVLSRRRL---------VGQLDMPFIADESVPTPADVTREVLGGSATAISIKTAR-TGFTGSTRVHHLAEGLGLDMVM-GNQIDGQIGTACTVSFGTAFERTSRHAGELSNLDMSDDLLTVPLQISDGQLH 344
39 -48.8002qdd_A mol:protein length:378 Mandelate racemase/muconate lactonizing enzyme  ali model follow..  16  117.QVAGLPLWQLLGGEAATPVPDQMLGLIAEAAAQGYRTHSAKIGGS------DPAQDIARIEAISAGLPDGHRVTFDVNR------AWTPAIAVEVLNSVRARD-----WIEQPCQTLDQCAH-----------VARRVANPIMLDECLHEFSDHLAAWSRGACEGVKIKPNRVGGLTRARQIRDFGVSVGWQMHI-EDVGGTALADTAALHLAASTPEANRLA......................... 320
40 -48.4002ps2_A mol:protein length:371 Putative mandelate racemase/muconate lactonizing enzyme  ali model follow..  12  118.KSVGLPVCELLGGRTNTRLPEDMRARVAKYRAKGYKGQSVKISGE-------PVTDAKRITAALANQQPDEFFIVDANG------KLSVETALRLLRLLPHGL---DFALEAPCA--TWRECISL---------RRKTDIPIIYDELATNEMSIVKILADDAAEGIDLKISKAGGLTRGRRQRDICLAAGYSVSV-QETCGSDIAFAAIVHLAQTIPERSLRCILECRDMVTVKTADGAFDIQDGFAT 347
41 -48.3003eez_A mol:protein length:378 putative Mandelate racemase/muconate lactonizing enzyme  ali model follow..  13  117.QAAGLPIADLMGGGSRTPRPEETRAVIDRYRQRGYVAHSVKIGGD-------VERDIARIRDVEDIREPGEIVLYDVNR------GWTRQQALRVMRATEDLH----VMFEQPG--ETLDDIAAI---------RPLHSAPVSVDECLVTLQDAARVARDGLAEVFGIKLNRVGGLTRAARMRDIALTHGIDMFV-MATGGSVLADAEALHLAATIPDHACHAVWACQDMLTVDIAGGR......... 336
42 -47.8003iji_A mol:protein length:338 Muconate cycloisomerase  ali model follow..  15  106.KLLGAPWYKIWGLNKEKTPTPDVVRAKTKECAGLFNILKVKLGRD---------NDKEMIETIRSV--TDLPIAVDAN------QGWKDRQYA--LDMIHWLKEKGIVMIEQPMPKEQLDDIAWV---------TQQSPLPVFADESLQRLGDVAALK--GAFTGINIKLMKCTGMREAWKMVTLAHALGMRVMV-GCMTETSCAISAASQFSPAVD............................... 300
43 -47.6002rdx_A mol:protein length:379 Mandelate racemase/muconate lactonizing enzyme, putative  ali model follow..  10  117.QATGQPVWMLLGGKLCDGAPAETRAELARHRAAGYRQFQIKVGAD-------WQSDIDRIRACLPLLEPGEKAMADANQ------GWRVDNAIRLARATRDLD----YILEQPCRSYE-----------ECQQVRRVADQPMKLDECVTGLHMAQRIVADRGAEICCLKISNLGGLSKARRTRDFLIDNRMPVVA-EDSWGGEIASAAVAHFAASTPEEFLINSTDLMNYNTRSTGLGGPTVHQGRLY 345
44 -47.2004gfi_A mol:protein length:329 Mandelate racemase/muconate lactonizing enzyme family protein  ali model follow..  15  104.KMSGKRAAEQVLGQPAQPLVTAYTMAAKTAENAGRPLLKIKTGTA---------DDEARLRAVRAAA-PEARIIIDAN------EGWNDDNIEYYLKLAAELK---ISLIEQPLPAGKDAMLARIEHPV-----------LICADESVHSTEDLAGLR--DRYDAINIKLDKTGGLTEALVMKAEAERLGFTIMV-GCMLGTSLGMAPAVLVAQGTA---FADLDGPLLLAED............... 308
45 -47.1003i6t_A mol:protein length:381 Muconate cycloisomerase  ali model follow..  16  120.RIAGVPVWALLGGRCRDRIPDKDLALMQRLQDDDVRIIKLKTGFK------DHAFDMMRLERLRAD-FPAFDIRVDYNQ------GLHHDVALARVRDVATFK---PTFIEQPVKAHLRGLMARI---------RDAVDVPLLADESIFGPEDMAEHP--EIADGVSIKIMKSGGLTRAQTVARMAAARGLSAYG-GDMFEAGLAHLAGAHMIAATPEITLGEFYQATYFLCDDILAAPFPVADGHVL 350
46 -46.8004e8g_A mol:protein length:391 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain protein  ali model follow..  11  130.KHYGVRVADLLGGVAAERVPDEIARIAAEKVAEGFPRLQIKIGGRP------VEIDIETVRKVWERIGTGTRLAVDGNR------SLPSRDALRLSRECPEIP----FVLEQPC--NTLEEIAAI---------RGRVQHGIYLDESGEDLSTVIRAAGQGLCDGFGMKLTRIGGLQQMAAFRDICEARALPHSC-DDAWGGDIIAAACTHIGATVQPRLNEGVWVAQPYIAQPYDEEN......... 351
47 -46.1002pmq_A mol:protein length:377 Mandelate racemase/muconate lactonizing enzyme  ali model follow..  10  115.KRLGVPVHELLGGALTDSVSDEAARQALEKQREGYSRLQVKLGARP------IEIDIEAIRKVWEAVGTGIALAADGNR------GWTTRDALRFSRECPDIP---FVMEQPCNSFEDLEA------------IRPLCHHALYMDEDGTSLNTVITAAATSLVDGFGMKVSRIGGLQHMRAFRDFCAARNLPHTC-DDAWGGDIVSAACTHIASTVLP.............................. 315
48 -46.1004h2h_A mol:protein length:376 Mandelate racemase/muconate lactonizing enzyme  ali model follow..  10  116.KRLGVPVHELLGGALTDSVSDEAARQALEKQREGYSRLQVKLGARP------IEIDIEAIRKVWEAVGTGIALAADGNR------GWTTRDALRFSRECPDIP---FVMEQPCNSFEDLEA------------IRPLCHHALYMDEDGTSLNTVITAAATSLVDGFGMKVSRIGGLQHMRAFRDFCAARNLPHTC-DDAWGGDIVSAACTHIASTVLP.............................. 316
49 -45.6002oqy_A mol:protein length:391 Muconate cycloisomerase  ali model follow..  10  110.KYLDISVSDFLGGRVKEKIKESNLDVVRQKLEQGFDVFRLYVGKN-------LDADEEFLSRVKEEFGSRVRIKYDFSH------LLNWKDAHRAIKRLTKYDL-GLEMIESPAPRNDFDGLYQLRLK-----------TDYPISEHVWSFKQQQEMIKKDAIDIFNISPVFIGGLTSAKKAAYAAEVASKDVVL-GTTQELSVGTAAMAHLGCSLTNINHTSDPTGPELYVGDVVKNRVTYKDGYLY 346
50 -45.4001fhv_A mol:protein length:323 O-SUCCINYLBENZOATE SYNTHASE  ali model follow..  11  100.TLPQAANYRAAP----NGDPDDLILKLADM--PGEKVAKVKVGLY------EAVRDGMVVNLLLEAI-PDLHLRLDANR------AWTPLKGQQFAKYVNPDYRDRIAFLEEPCKTRD-----------DSRAFARETGIAIAWDESLREPDFA--FVAEEGVRAVVIKPTLTGSLEKVREQVQAAHALGLTAVI-SSSIESSLGLTQLARIAAWLTPDTIPGLDTLDL-MQAQQVRRWPGSTLPVVE 315
51 -45.1002hzg_A mol:protein length:401 Mandelate racemase/muconate lactonizing enzyme/Enolase superfamily  ali model follow..  16  116.RRLSAPAWALLGYSASHGKPQETLERARAARRDGFAAVKFGWGPIGR---GTVAADADQIMAAREGLGPDGDLMVDVGQIF----GEDVEAAAARLPTLDAAG---VLWLEEPFDAGALAAHAALAG--------RGARVRIAGGEAAHNFHMAQHLMDYGRIGFIQIDCGRIGGLGPAKRVADAAQARGIT--YVNHTFTSHLALSASLQPFAGLEADRICEYPAAPQQLALDITGDHI........ 346
52 -44.9003gc2_A mol:protein length:323 o-succinylbenzoate synthase  ali model follow..  12  117....................PDDLVLRLADM--PGEKIAKVKVG------LYEAVRDGMVVNLLLEAI-PDLHLRLDANR------AWTPLKAQQFAKYVNPDYRARIAFLEEPCKTRD-----------DSRAFARETGIAIAWDESLREADFTFEAE--EGVRAVVIKPTLTGSLDKVREQVAAAHALGLTAVI-SSSIESSLGLTQLARIAAWLTPGTLPGLDTLHLMQAQQI............. 303
53 -44.9003h70_A mol:protein length:343 O-succinylbenzoic acid (OSB) synthetase  ali model follow..  21  106....VMALYQMFHVLPSFSVSGLSNKQLESLKATKPTRIKLKWTPQ----------IMHQIRVLRE-LDFHFQLVIDAN------ESLDRQDFT----QLQLLAREQVLYIEEPFK--DISMLDEV---------ADGTIPPIALDEKATSLLDIINLIELYNVKVVVLKPFRLGGIDKVQTAIDTLKSHGAKVVI-GGMYEYGLSRYFTAMLARK................................. 290
54 -44.7003vdg_A mol:protein length:445 Probable glucarate dehydratase  ali model follow..  13  143.QVTGRPVSDLLGGAVRDAVDGIVAQARRMIDEYGFSAIKLKGGVFA------PEEEMAAVEALRAAFP-DHPLRLDPNA------AWTPQTSVKVAAGLEGV----LEYLEDPTP--GLDGMAEV---------AAQAPMPLATNMCVVAFDQLPAAVAKNSVQVVLSDHHYWGGLQRSRLLAGICDTFGLGLSM-HSNSHLGISLAAMVHLAAATPNLTYACDTHWPWRHEDVVAPGALNFCDGEVQ 388
55 -44.1003vc5_A mol:protein length:441 Mandelate racemase/muconate lactonizing protein  ali model follow..  13  138.KAAGRPVADLLGGKVRDAVDGIVAQARLLIGEYGFRSIKLKGG------VFPPEQEAEAIQALRDAFP-GLPLRLDPNA------AWTVETSIRVGRALDGV----LEYLEDPTP--GIDGMARV---------AAEVPMPLATNMCVVTPEHLPAAVERRPIGVLLIDHHYWGGLVRSAHIATLCATFGIELSM-HSNSHLGISLAAMTHLAAATPAITHACDTHTPWQDGQDVVAPG......... 374
56 -44.0003uxk_A mol:protein length:383 Mandelate racemase  ali model follow..  13  141.KVHETPLVKLLGANARPDGVKLATERAVTAAELGFRAVKTKIGYPA------LDQDLAVVRSIRQAVGDDFGIMVDYN------QSLDVPAAIKRSQALQQEG---VTWIEEPTLQHDYEGHQRI---------QSKLNVPVQMGENWLGPEEMFKALSIGACRLAMPDAMKIGGVTGWIRASALAQQFGIPMS-------SHLFQEISAHLLAATPTAHWLE......................... 341
57 -43.3004it1_A mol:protein length:446 Putative glucarate dehydratase  ali model follow..  13  140.RYLNVPLVDLLGGAVRDEVQQIVAQAARMIEAYGFKSIKLKAGT------LPPEHEVACIKALKKAFP-GYPLRIDPNG------NWSLETSIRMAELLG----DDLQYYEDPT--PGLEGMAEL---------HKRTGLPLATNMVVTDFDEFRRSVAQNSVQIVLADHHYWGGLRDTQTLAKMCDTFGLGVSM-HSNSHLGISLMAMAHVAAAVPNLDYAC......................... 362
58 -43.0002gdq_A mol:protein length:382 yitF  ali model follow..  11  106.KAADCSVCELWGGRYREEIPSRSVSNVEAQLKKGFEQIKVKIGG------TSFKEDVRHINALQHTAGSSITMILDANQ------SYDAAAAFKWERYFSEWT--NIGWLEEPLPFDQPQDYAML---------RSRLSVPVAGGENMKGPAQYVPLLSQRCLDIIQPDVMHVNGIDEFRDCLQLARYFGVR--ASAHAYDGSLSRLYALFAQACLPPWSKMK......................... 318
59 -42.8003toy_A mol:protein length:383 Mandelate racemase/muconate lactonizing enzyme family protein  ali model follow..  15  134.QLAGKPVVELLGGSARPDARDDERTLRTACDEHGFRAIKSKGGHG------DLATDEAMIKGLRALLGPDIALMLDFNQ------SLDPAEATRRIARLADYD---LTWIEEPVPQENLSGHAAV---------RERSEIPIQAGENWWFPRGFAEAIAAGASDFIMPDLMKVGGITGWLNVAGQADAASIPMS-------SHILPEASAHVLPVTPTAHFLEV----LDFAGAILTEPLRVIDGKV. 355
60 -42.7003h12_A mol:protein length:397 mandelate racemase  ali model follow..  11  120.RAMNQPIYQLLGGKFHTRGPDQAADELAGWVEQGFTAAKLKVGRA-------PRKDAANLRAMRQRVGADVEILVDANQ------SLGRHDALAMLRILDEAG---CYWFEEPLSIDDIEGHRILRA--------QGTPVRIATGENLYTRNAFNDYIRNDAIDVLQADASRAGGITEALAISASAASAHLA--WNPHTFNDIITVAANLHLVAASPHPAMFEWDITHNDLMTRLASYDLKLENGLVQ 354
61 -42.7003va8_A mol:protein length:445 PROBABLE DEHYDRATASE  ali model follow..  11  144....GISVSDLLGGRVRDSVEGVVKQAKKIIDEYGFKAIKLKGGVFP------PADEVAAIKALHKAFP-GVPLRLDPNA------AWTVETSKWVAKELEGI----VEYLEDPA--GEIEGMAAV---------AKEASMPLATNMAVVAFDHLPPSILQDAVQVILSDHHFWGGLRKSQTLASICATWGLRLSM-HSNSHLGISLAAMTHLASATPNLDYAC......................... 361
62 -42.6003ddm_A mol:protein length:392 Putative mandelate racemase/muconate lactonizing enzyme  ali model follow..  13  130.RRAGQPLWAWLGGSGDRINPENPEDVVARKAAEGYRAFKLKVGFD-------DARDVRNALHVRELLGAATPLMADANQ------GWDLPRARQMAQRLGPAQ---LDWLEEPLRADRPAAEWA---------LAQAAPMPLAGGENIAGVAAFETALAARSLRVMQPDLAKWGGFSGCLPVARAVVAAGLR--YCPHYLGAGIGLQASAHLLAAVPGLASPG......................... 333
63 -42.6003tj4_A mol:protein length:372 Mandelate racemase  ali model follow..  17  120.KKAGVPLWHYLGGARTAGVEDLLAGSARAVEEDGFTRLKIKVGHD------DPNIDIARLTAVRERVDSAVRIAIDGNG------KWDLPTCQRFCAAAKDLD---IYWFEEPLWYDDVTSHARL---------ARNTSIPIALGEQLYTVDAFRSFIDAGAVAYVQPDVTRLGGITEYIQVADLALAHRLPV-----VPHAGEMSQVHVHLSYWHPASTILE......................... 327
64 -42.5002qgy_A mol:protein length:391 Enolase from the environmental genome shotgun sequencing of the Sargasso Sea  ali model follow..  11  118.KLKNLPLNSLLTKSPKPNVPNDYLRQIEKFYGKKYGGIKIYPMLDS------LSISIQFVEKVREIVGDELPLMLDLAVP------EDLDQTKSFLKEVSSFN---PYWIEEPVDGENISLLTEI---------KNTFNMKVVTGEKQSGLVHFRELISRNAADIFNPDISGMGGLIDIIEISNEASNNGIFI-SPHCWNSMSVSASAMLHVCSSIPNSEKAEIFPDYINFSKKFCELPFDIIDNKAH 353
65 -42.3003n4e_A mol:protein length:393 Mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein  ali model follow..  13  108.KLLGQPIYKLLGGAWRTRLDEVVREVARRVEAEQPAAVKIRWDGDRTRCDVDIPGDIAKARAVRELLGPDAVIGFDANN------GYSVGGAIRVGRALEDLG---YSWFEEPVQHYHVGAMGEV---------AQRLDITVSAGEQTYTLQALKDLIL-SGVRMVQPDIVKMGGITGMMQCAALAHAHGVE--FVPHQTQPGVGHFANIHVLSTLMHMTKPVELADRWDRGRPVFRNPAEPVDGHFA 348
66 -42.2003ugv_A mol:protein length:390 Enolase  ali model follow..  13  135.RAANMPLCTLLGGTPGAEVAAEAVELKAEGQGTGFKGLKLRMGRD------DPAVDIETAEAVWDAVGRDTALMVDFNQ------GLDMAEAMHRTRQIDDLG---LEWIEEPVVYDNFDGYAQL---------RHDLKTPLMIGENFYGPREMHQALQAGACDLVMPDFMRIGGVSGWMRAAGVAGAWGIPM-------STHLYPEVGAHVMRVTETAHWLE......................... 341
67 -42.1002oqh_A mol:protein length:385 Putative isomerase  ali model follow..  11  110.KATGQSVTDLLGGAVRDEVKAMAEHAVRVVEEGGFDAVKLKGTTD-------CAGDVAILRAVREALP-GVNLRVDPNA------AWSVPDSVRAGIALEELD---LEYLEDPCV--GIEGMAQV---------KAKVRIPLCTNMCVVRFEDFAPAMRLNAVDVIHGDVYKWGGIAATKALAAHCETFGLGMNL-HSGGELGIATAAHLAVVSSTPVLSRAI......................... 323
68 -42.1003sjn_A mol:protein length:374 Mandelate racemase/muconate lactonizing protein  ali model follow..  15  120....GVPVHTLLGGKYRDKIPEDNVAIVQGLKDQGFSSIKFGGGVMGD----DPDTDYAIVKAVREAAGPEMEVQIDLASKW-----HTCGHSAMMAKRLEEFN---LNWIEEPVLADSLISYEKL---------SRQVSQKIAGGESLTTRYEFQEFITKSNADIVQPDITRCGGITEMKKIYDIAQMNGTQLIPHGFS--TGILLHASVHFLAACEQGTLMEFSQSSSPLFTSLVKNQLQFDNGFVA 352
69 -42.0004dye_A mol:protein length:398 isomerase  ali model follow..  11  125.KATGQSVTDLLGGAVRDEVKAMAEHAVRVVEEGGFDAVKLKGTTD-------CAGDVAILRAVREALP-GVNLRVDPNA------AWSVPDSVRAGIALEELD---LEYLEDPCV--GIEGMAQV---------KAKVRIPLCTNMCVVRFEDFAPAMRLNAVDVIHGDVYKWGGIAATKALAAHCETFGLGMNL-HSGGELGIATAAHLAVVSSTPVLSRAI......................... 338
70 -41.9003t8q_A mol:protein length:370 Mandelate racemase/muconate lactonizing enzyme family protein  ali model follow..  10  97.RLEGKPVCELIGGTPGTTPKDEAARLSRLRDRFGFDAFKFRIGAECGRGQEWPGRTEEIVPTIRAAMDDSVALLVDANS------CYGPEQAIEVGKMLEQNG---ISHYEEPCPYWEYEQTQQV---------TNALSIDVTGGEQDCELQNWRRMIEMKAVDIVQPDICYLGGITRTLRVAEMAHKAGLPCT---HAANLSMVTLFTMHLLRAIPNAGKYLEFSIEGEDYYPWQDDLFVASPYEIV 337
71 -41.8002oz8_A mol:protein length:389 Mll7089 protein  ali model follow..  12  116.KEAGLPLHVLLGSRRNRLDDDAFVSLFSHAASIGYSAFKIKVGH------RDFDRDLRRLELLKTCVPAGSKVMIDPN------EAWTSKEALTKLVAIREAG-HDLLWVEDPILRHDHDGLRTL---------RHAVTWTQINSGEYLDLQGKRLLLEAHAADILNVH----GQVTDVMRIGWLAAELGIPISIGN------TFLEAGVHMAVALPEVEWLEYS---FQNFDHLVEQPIEIRDGYAY 339
72 -41.5002pp0_A mol:protein length:398 L-talarate/Galactarate Dehydratase  ali model follow..  17  145.KRAGLPLAKLLGAHRDSTPLDQVLKNVVISRENGIGGIKLKVGQPN------CAEDIRRLTAVREALGDEFPLMVDANQ------QWDRETAIRMGRKMEQFN---LIWIEEPLDAYDIEGHAQL---------AAALDTPIATGEMLTSFREHEQLILGNASDFVQPDAPRVGGISPFLKIMDLAAKHGRKLA-------PHFAMEVHLHLSAAYPLEPWLE......................... 348
73 -41.4003t9p_A mol:protein length:388 Mandelate racemase/muconate lactonizing enzyme family protein  ali model follow..  10  111.KLEGKPVATLLGGSPGPTPEDEAERFCRLRDDKGFTAFKWRVGAEAGRDHEWPGRTEAVVPTVSRALGDGIEKLVDGNS------CYSPARAIEVGKLLQDNG---IGHFEEPCPYWEYDQTAAV---------RAALLLDVAGGEQDCEYSSWQLMLDRGAVDIVQPDVMYMGGMHRTLQVCQMAARAGLP--VTPHAANLSLVTMCTMHLLRAIPNAGKYLEFSIEGPEYYPWQEGLFLGDPYRIE 351
74 -41.4005xd7_A mol:protein length:368 3,6-anhydro-alpha-L-galactonate cycloisomerase  ali model follow..  15  118.KREGLPLWKMAGGKNNTFPLEKLLNNICGYLESGFNAVKIKIGREN------MQEDIDRIKAVRELIGPDITFMIDANY------SLTVEQAIKLSKAVEQYD---ITWFEEPTLPDDYKGFAEI---------ADNTAIPLAMGENLHTIHEFGYAMDQAKLGYCQPDASNCGGITGWLKAADLITEHNIPVC-------THGMQELHVSLVSAFDTGWLEV......................... 320
75 -41.4004ggb_A mol:protein length:378 Putative uncharacterized protein  ali model follow..  14  111.KHYGASISMLLGGRWRESVRSDNASEMAERRAEGFHACKIKIGFG-------VEEDLRVIAAVREAIGPDMRLMIDANH------GYTVTEAITLGDRAAGFG---IDWFEEPVVPEQLDAYARV---------RAGQPIPVAGGETWHGRYGMWQALSAGAVDILQPDLCGCGGFSEIQKIATLATLHGVRIV---HVWGTGVQIAAALQFMAAMTPDPVRV......................... 321
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 0 9 7   jobs submitted since Jan 1, 2011
Comments and questions to: webmaster
Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Ye Y, Jaroszewski L, Li W, Godzik A. A segment alignment approach to protein comparison. Bioinformatics. 2003 Apr 12;19(6):742-9.