current user: public

If you have questions about the server, please let us know.

Query: PF08045.11; E9DYC2_METAQ/1-287; Cell division control protein 14, SIN component, from PfamA32U

Results of FFAS03 search in PDB1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .  130    .  140    .  150    .  160    .  170    .  180    .  190    .  200    .  210    .  220    .  230    .  240    .  250    .  260    .  270    .  280    .
# Score Template Links and tools%idFirst MEALLSLAFDNLSSYDGPKVRKGLRQVEGLLAQICLSDGRAAAQRRQSCVDGEADAPLSPPRKDLGELSQDPAFREFFKLQEGFEWNVAMRLIRTLDRLMAKGSDGQNDLLILSALDLIQGVLLLHPPSKTLFSREQNMNLLLDLLEPFNCPAIQSATLLTLVVALIDTPSNTRTFEGLDGLLTVTSLFKSRSTSREVKLKLVEFLYCYLMPETPSIPRADQRDSVPAMLQRSPSKLAGAFNAESRRKRAGSSGLVTLTTEEKQELLSRHLSSVEDLVKDLKNCAPFLast
1 -25.5001xqr_A mol:protein length:296 HspBP1 protein  ali model follow..  11  5........................SGLVPRGSHMRGQRGEEQMKSCLRVLSQPMPPTAGEAEQAADQQEREGALELLADLCENMDNAADFCQLSGMHLLVGRYLEAGAAGLRWRAAQLIGTCSQNVAAIQEQVLGLGALRKLLRLLDRDACDTVRVKALFAISCLVREQEAGLLQFLRLDGFSVLMRAMQQQV--QKLKVKSAFLLQNLLVGHPEHKGTLCSMGMVQQLV-----ALVRTEHSPFHEHVLGALCSLVTDFPQGVRECREPELGLEELLRHRCQ.... 257
2 -24.0003qml_C mol:protein length:315 Nucleotide exchange factor SIL1  ali model follow..  11...................................MKASPGDYEFSSDFKEMRNIIDSNPTLSSQDIARLEDSFDRIMEFAHDYKHGYKIITHEFALLANLSLNENLPLTLRELSTRVITSCLRNNPPVVEFINESFPKSKIMAALSNLNDSNHRSSILIKRYLSILNELPVTSEDLPIYSTVVLQNVYERNNKDKQLQIKVLELISKILKADMYENDDTNLILFKRNAENWSSNLQ------------ANEFQEMVQNKSIDELHTRTFFDTLYNLKKIFKS.... 251
3 -19.0005a7d_L mol:protein length:341 INSCUTEABLE  ali model follow..  10  81LQVHFERSERVLSGLQASSLPEALAGATQLLSHL-DAKIERRRYEQHLEQIRTVSKDTRYSLERQHYINLESLLDDVQLLKRHTLITLRLIFERLVRVLVISIEQSQCDLLLRANINMVATLMNIDRSLSDAFVQNEAVRTLLVVVLDHKQSSVRALALRAL-ATLCCAPQAINQLGSCGGIEIVRDILQVESAGERERREAVSLLAQITAA-------------------------------------------------GSEHRVPGLRDCAESLVAGLAAL... 337
4 -16.3003tt9_A mol:protein length:233 Plakophilin-2  ali model follow..  13  10...............................................................................................LERAVSMLEADHMLPSRISAATFIQHECFQKSEARKRVNQLRGILKLLQLLK-VQNEDVQRAVCGALRNLVFEDNDNKLEVAELNGVPRLLQVLKQTR-DLETKKQITGLLWNLSSNDKLKNLMITEIIPFSGWPEGDYPKANGLLDFDIFYNVTGCLRNMSSAGADGRKAMRRCDGLIDSLVHYVRGTIA. 208
5 -14.9005ewp_A mol:protein length:252 ARO (armadillo repeats only protein)  ali model follow..  10  5IRKLLSFTSNDILRFDKAYDENDVQEFVNLCSS------------TCEIEKLEDRMHPWAADPKTIGALSATQLAILASKENEPHYKDAIREANGIAVFINLLKSHELDRV-HAAVVALSFLSVDNVKNCICMFESGALPYLISGMK-SNIDGMKAACAQTCRNIFVLDKKYKKEFLKLGGITQLVNLLELPSNYDDTQLEAIYHLEDFILNDGDEIPE.................................................................... 214
6 -14.8005xjg_A mol:protein length:506 Vacuolar protein 8  ali model follow..  241.PRLVSKLVSLMDSPSSRVKCQATLALRNLASD---------TSYQLEIVRAGGLPHLVKLIQSDSIPLVLASVACIRNISIHPLNEGLIVDAGFLKPLVRLLDYKDSEEIQCHAVSTLRNLAASSEKNRKEFFESGAVEKCKELAL-DSPVSVQSEISACF-AILALADVSKLDLLEANILDALIPMTFSQN--QEVSGNAAAALANLCSRVNNYTKIIEAWDRPNEGIRGFLIRFLKSDYATFEHIALWTILQLLESHNDKVEDLVKNDDDIINGVRK....... 506
7 -14.7003sla_A mol:protein length:168 Catenin beta-1  ali model follow..  55.............................................................................................QMVSAIVRTMQNTNDVETARCTAGTLHNLS-HHREGLLAIFKSGGIPALVKMLG-SPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTN--VKFLAITTDCLQIL.............................................................................. 166
8 -14.1004r0z_A mol:protein length:629 Protein humpback-2  ali model follow..  12  31....LPDLVKLMCDHDESVVARAVHRAYML------SREDPNFFNAPGFDHRSFVEALMAASKSSNVNVRRNAIGALSHMSEQRGGPLLIFRSGGLAEIIRMLYDSL-ESVVHYAVTTLRNLLMHVSDSRAQARALNAVEALTPHLH-KTNPKLLAQVADGLYFLLIDDAPSKITFLSLLGPQILVSILREYSDHRKLIYTVVRCIRSLSVCPSNKPALISLGCLPALYVELCTAKDERSQTAILVAM---------RNLSDSATNEENLTQLIIKLLEIIRVAND. 295
9 -13.9004dba_A mol:protein length:210 Designed Armadillo repeat protein, YIIM3AII  ali model follow..  13  7...ELPQMTQQLNSDDMQEQLSATRKFSQILSD--------GNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLS-SPNEQILQEALWALSNIASGGNEQKQAVKEAGALEKLEQLQSHEN--EKIQKEAQEALEKLQSH........................................................................... 204
10 -13.9004db9_A mol:protein length:210 Armadillo repeat protein, YIIIM3AIII  ali model follow..  13  7...ELPQMVQQLNSPDQQELQSALRKLSQIASG--------GNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLS-SPNEQILQEALWALSNIASGGNEQKQAVKEAGAEPALEQLQSSPN--EKIQKEAQEALEKIQSH........................................................................... 204
11 -13.8004db6_A mol:protein length:210 Armadillo repeat protein  ali model follow..  13  7...ELPQMVQQLNSPDQQELQSALRKLSQIASG--------GNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLS-SPNEQILQEALWALSNIASGGNEQKQAVKEAGALEKLEQLQSHEN--EKIQKEAQEALEKLQSH........................................................................... 204
12 -13.6001xm9_A mol:protein length:457 plakophilin 1  ali model follow..  12  4...............................................................................................IPKAVQYLSSQDEKYQ-AIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLR-SPNQNVQQAAAGALRNLVFRSTTNKLETRRQNGIREAVSLLRRTG-NAEIQKQLTGLLWNLSSTDELKEELIADIIPFSGWCDGNSNMSREVVDPEVFFNATGCLRNLSSADAGRQTMRNYS-GLIDSLMAYVQNCVA. 199
13 -13.1004rxh_B mol:protein length:495 Importin subunit alpha  ali model follow..  10  20LSEDLPKMVEGVFSSEIDKQIQATTKFRKLLS-------KERNPPIEEVIKTGVVGRFVEFLRSPHTLVQFEAAWALTNIASGSATQTQVVIEAGAVPIFVELLGSPEPDVREQAVWALGNIAGDSPQCRDYVLSCGALRPLLTLLGDSRKLSMLRNATWTLSNFCRGKTPQPDWNTIAPALPVLAKLVYSL--DDEVLIDACWAISYLSDGSNDKIQAVIEAGIPRRLV-----ELLMHASTSVQTPALRSVGNIVTGDDVQTQVIINC-GALPCLLSLLSSNKD. 290
14 -12.9005ufl_A mol:protein length:561 Protein CIP2A  ali model follow..  12  2MDSTLKSLLLTVSQYKAVKSEANATQLLRHLEVISGQKLTRLFTSNQILTSECLSCLVELLEDPNISASLISIIGLLSQLAVDIETRDCLQNTYNLNSVLAGVRSSHTDSVFLQCIQLLQKLTYNVKIFYSGANIDELITFLIDHIQ-SSEDELKMPCLGLLANLCRHNLSVQTHIKTLSNVKSFYRTLITAHSSLTVVVFALSILS--LTLNEEVGEKLFHARNIHQTFQLIFNILINGDGTLTRKYSVDLLMDLLKNPKIADYLTRYE-SCLHQVLGLLNGKDP. 294
15 -12.9004v3q_A mol:protein length:247 YIII_M4_AII  ali model follow..  13  45...ALPALVQLLSSPNEQILQEALWTLGNIASG--------GDEQIQAVIDAGALPALVQLLSSPNEQILQEALWTLGNIASGGDEQIQAVIDAGALPALVQLLSSPNEQILQEALWTLGNIASGGDEQIQAVIDAGALPALVQLLS-SPNEQILQEALWTLGNIASGGNEQKQAVKEAGALEKLEQLQSHEN--EKIQKEAQEAL................................................................................. 236
16 -12.6003nmz_A mol:protein length:458 APC variant protein  ali model follow..  11  253LQQVIASVLRNLSWRADVNSKKTLREVGSVKALMECALEVKKESTLKSVLSALWNLSAHCTENKADICAVDGALAFLVGTLTYRSQT----------------NTLAIIESGGGILRNVSSLIATNEDHRQILRENNCLQTLLQHLK-SHSLTIVSNACGTLWNLSARNPKDQEALWDMGAVSMLKNLIHSKH--KMIAMGSAAALRNLMANRPAKYKD.................................................................... 452
17 -12.6004hxt_A mol:protein length:252 De Novo Protein OR329  ali model follow..  14  1............................................................................................MNDVEKLVKLLTSTDSETQK-EAARDLAEIASGPASAIKAIVDAGGVEVLVKLLT-STDSEVQKEAARALANIASGPDEAIKAIVDAGGVEVLVKLLTSTD--SEVQKEAARALANIASGPDEAIKAIVDAGGVEVLV-----KLLTSTDSEVQKEAARALANIASGPDEAIKAIVDA-GGVEVLVKLLTS.... 181
18 -12.6004rzp_A mol:protein length:252 Engineered Protein OR366  ali model follow..  11  3...DLEKLVELLTHDDSKTQQEAARDLAEIAS--------GNASAIKQVIDAGALEKLVELLTHDDSKVQQEAARALANIASGNDEAIKQVIDAGALEKLVELLTHDDSKVQQEAARALANIASGNDEAIKQVIDAGALEKLVELLT-HDDSKVQQEAARALANIASGNDEAIKQVIDAGALEKLVELLTHDD--SKVQQEAARALANIASGNTSAIK..................................................................... 206
19 -12.5004v3o_A mol:protein length:289 YIII_M5_AII  ali model follow..  13  3...ELPQMVQQLNSPDQQELQSALRKLSQIASG--------GNEQIQAVIDAGALPALVQLLSSPNEQILQEALWTLGNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWTLGNIASGGNEQIQAVIDAGALPALVQLLS-SPNEQILQEALWTLGNIASGGNEQIQAVIDAGALPALVQLLSSPN--EQILQEALWTLGNIASGGNEQIQAVIDAGALPALV-----QLLSSPNEQILQEALWTLGNIASGGNEQKQAVKEA-GALEKLEQLQSHENE. 268
20 -12.5004b8j_A mol:protein length:528 IMPORTIN SUBUNIT ALPHA-1A  ali model follow..  176VREQAVWALGNVAGDSPKCRDLVLANLLPLLAQLNEHTKLSMLRNATWTLSNFCRGKLARLIHSNDEEVLTDACWALSYLSDGTNDKIQAVIEAGVCPRLVELLLHPSPSVLIPALRTVGNIVTGDDAQTQCIIDHQALPCLLSLLTQNLKKSIKKEACWTISNITAGNKDQIQAVINAGIIGPLVNLLQTA--EFDIKKEAAWAISNATSGGSHDQIKYLVSEGCIKPLCDLLIC-------------------------PDIRIVTVCLEGLENILKVGETDK.. 449
21 -12.5004d4e_A mol:protein length:251 ARMADILLO REPEAT PROTEIN ARM00016  ali model follow..  13  49...ALSPLVKLLDDASEEVIKNAVAAIANIAAG--------NNEQIQKLIEAGALSPLVKLLDDASEEVIKNAVAAIANIAAGNNEQIQKLIEAGALSPLVKLLDDASEEVIKNAVAAIANIAAGNNEQIQKLIEAGALSPLVKLLD-DASEEVIKNAVAAIANIAAGNNEMKQKLEEAGALPALEKLQSHAN--EEVQKNAQAALEAF.............................................................................. 243
22 -12.5005zhx_A mol:protein length:487 Rap1 GTPase-GDP dissociation stimulator 1  ali model follow..  236.NGIVEKLMDLLDRHVEDGNVTVQHAALSALRNLAIPVINKAKMLSAGVTEA-----VLKFLKSEMPPVQFKLLGTLRMLIDAQAEAAEQLGKNLVERLVEWCEAKDHAGVMGESNRLLSALIRHSKDVIKTIVQSGGIKHLVTMAT-SEHVIMQNEALVALALIAALELGTAEKLESAKLVQILHRLLADERSAPEIKYNSMVLICALMGSEC......................................................................... 447
23 -12.4005mfb_A mol:protein length:243 YIII(Dq)4CqI  ali model follow..  13  47...ALSPLVKLLDDASEEVIKNAVAAIANIAAG--------NNEQIQKLIEAGALSPLVKLLDDASEEVIKNAVAAIANIAAGNNEQIQKLIEAGALSPLVKLLDDASEEVIKNAVAAIANIAAGNNEQIQKLIEAGALSPLVKLLD-DASEEVIKNAVAAIANIAAGNNEQIQKLEEAGAEPALEKLQSSPN--EEVQKNAQAAL................................................................................. 238
24 -12.4004tnm_A mol:protein length:531 Importin subunit alpha  ali model follow..  10  177VREQAVWALGNVAGDSPKCRDLVLSYMTPLLSQFNENTKLSMLRNATWTLSNFCRGKLERLVQSMDEEVLTDACWALSYLSDNSNDKIQAVIEAGVVPRLIQLLGHSSPSVLIPALRTIGNIVTGDDLQTQMVLDQQALPCLLNLLKNNYKKSIKKEACWTISNITAGNADQIQAVIDAGIIQSLVWVLQSAEF--EVKKEAAWGISNATSGGTHDQIKFMVSQGCIKPLCDLLTC-------------------------PDLKVVTVCLEALENILVVGEAEK.. 450
25 -12.3004plr_A mol:protein length:289 Arm00008  ali model follow..  13  4...ELPQMVQQLNSPDQQELQSALRKLSQIASG--------GNEQIQAVIDAGALPALVQLLSSPNEQILQEALWTLGNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWTLGNIASGGNEQIQAVIDAGALPALVQLLS-SPNEQILQEALWTLGNIASGGNEQIQAVIDAGALPALVQLLSSPN--EQILQEALWTLGNIASGGNEQIQAVIDAGALPALV-----QLLSSPNEQILQEALWTLGNIASGGNEQKQAVKEA-GAEPALEQLQSSPNE. 269
26 -12.3003gq2_A mol:protein length:651 General vesicular transport factor p115  ali model follow..  10  20.AETIQKLCDRVSSTLLDDRRNAVRALKSLLIHVLQTDRSDSEIIGYALDT------LYNIISNDEEEEVEENSTRQSEDLGSQFTEIFIKQQENVTLLLSLLEEFDFHVRW-PGVKLLTSLLKQLGPQQIILVSPMGVSRLMDLLA-DSREVIRNDGVLLLQALTRSNGAIQKIVAFENAFERLLDIITEEGNSDGVVEDCLILLQNLLKNNNSNQNFFKEGSYIQRMKPWFEVGDENSGWSAQKVTNLSPNNPPGATSSCQKAMFQCGL--LQQLCTILMA.... 322
27 -12.3003l6x_A mol:protein length:584 Catenin delta-1  ali model follow..  13  50...............................................................................................LPEVIAMLGFRL-DAVKSNAAAYLQHLCYRNDKVKTDVRKLKGIPVLVGLLD-HPKKEVHLGACGALKNISFRDQDNKIAIKNCDGVPALVRLLRKAR-DMDLTEVITGTLWNLSSHDSIKTDEVIIPHSGWEREPNEDCKPRHIEWESVLTNTAGCLRNVSSERSEARRKLRECDGLVDALIFIVQAE... 247
28 -12.3003fex_C mol:protein length:467 Importin subunit alpha-2  ali model follow..  11  10...............................................................................................VDDIVKGINSSNVENQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGRTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASPH--AHISEQAVWALGNIAGDGSVFRDLVIKYGAVDPLLALLAVPDMSSLACGYLRNLTWTLSNLCRNKNPAPPIDAVE-QILPTLVRLLHH.... 194
29 -12.3004db8_A mol:protein length:252 Armadillo-repeat Protein  ali model follow..  12  49...ALPALVQLLSSPNEQILQEALWALSNIASG--------GNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLS-SPNEQILQEALWALSNIASGGNEQKQAVKEAGALEKLEQLQSHEN--EKIQKEAQEALEKLQSH........................................................................... 246
30 -12.2005mfi_A mol:protein length:243 YIII(Dq.V2)4CqI  ali model follow..  13  47...ALSPLVKLLDDASEEVIQEAVWAIANIASG--------NNEQIQKLIEAGALSPLVKLLDDASEEVIQEAVWAIANIASGNNEQIQKLIEAGALSPLVKLLDDASEEVIQEAVWAIANIASGNNEQIQKLIEAGALSPLVKLLD-DASEEVIQEAVWAIANIASGNNEQIQKLEEAGAEPALEKLQSSPN--EEVQKNAQAAL................................................................................. 238
31 -12.2003ifq_A mol:protein length:553 plakoglobin  ali model follow..  13  1.....KSAIVHLINYQDDAELAALPELTKLLNDVNQLSKKEASRRALMGSPQLVAAVVRTMQNTSDLDTARCTTSILHNLSHHREGLLAIFKSGGIPALVRMLSSPVES-VLFYAITTLHNLLLYQEGAKMAVRLADGLQKMVPLLN-KNNPKFLAITTDCLQLLAYGNQESKLIILANGGPQALVQIMRNYSYEK-VEAGGMQALGKHLTSNSPRLSDVATKQEGLESVLKILVNQLSVDDVNVLTCATGTLSNLTCNNSKNKTLVTQN-SGVEALIHAILR.... 321
32 -12.1005xgc_A mol:protein length:503 Rap1 GTPase-GDP dissociation stimulator 1  ali model follow..  11  4.........................................................................................................GSQSSCKAKVANIIAEVA-KNEFMRIPCVDAGLISPLVQLLN-SKDQEVLLQTGRALGNICYDSHSLQAQLINMGVIPTLVKLLGIHCQNAALTEMCLVAFGNLAELESSKEQFAST-----NIAEELVKLFKKQIEHDKREMIFEVLAPLAENDAIKLQLVEA--GLVECLLEIVQQ.... 172
33 -12.1004cb8_A mol:protein length:496 BETA-CATENIN-LIKE PROTEIN 1  ali model follow..  12  69...AVQSLLGLLGHDNTDVSIAVVDLLQELTDIDTLHESEEGAEVLIDALVDGQVVALLVQNLERLDESVKEEADGVHNTLAIVENMAEFR--LLQWLLKRLKAKMPFDANKLYCSEVLAILLQDNDENRELLGELDGIDVLLQQLSSTAEEQEMMENLFDSLCSCLMLSSNRERFLKGEGLQLMNLMLREKKISRSSALKVLDHAMIGPEGTDNCHKFVDI-PLFMKSPRKIKKVGTTEKEHEEHVCSILASLLRNLRGQQRTRLLNKFTENVDRLME........ 370
34 -12.1005aei_A mol:protein length:286 DESIGNED ARMADILLO REPEAT PROTEIN YIIIM5AII  ali model follow..  12  5...ELPQMVQQLNSPDQQELQSALRKLSQIASG--------GNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLS-SPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPN--EQILQEALWALSNIASGGNEQIQAVIDAGALPALV-----QLLSSPNEQILQEALWALSNIASGGNEQKQAVKEA-GALEKLEQLQSH.... 267
35 -12.1004d49_A mol:protein length:243 ARMADILLO REPEAT PROTEIN ARM00027  ali model follow..  12  47...ALSPLVKLLDDASEEVIKEAVWAIANIASG--------NNEQIQKLIEAGALSPLVKLLDDASEEVIKEAVWAIANIASGNNEQIQKLIEAGALSPLVKLLDDASEEVIKEAVWAIANIASGNNEQIQKLIEAGALSPLVKLLD-DASEEVIKEAVWAIANIASGNNEMKQKLEEAGALPALEKLQSHAN--EEVQKNAQAALEAF.............................................................................. 241
36 -12.1004v3r_A mol:protein length:286 YIII_M5_AII  ali model follow..  13  5...ELPQMVQQLNSPDQQELQSALRKLSQIAS--------GGDEQIQAVIDAGALPALVQLLSSPNEQILQEALWTLGNIASGGDEQIQAVIDAGALPALVQLLSSPNEQILQEALWTLGNIASGGDEQIQAVIDAGALPALVQLLS-SPNEQILQEALWTLGNIASGGDEQIQAVIDAGALPALVQLLSSPN--EQILQEALWTLGNIASGGDEQIQAVIDAGALPALV-----QLLSSPNEQILQEALWTLGNIASGGNEQKQAVKEA-GALEKLEQLQSH.... 267
37 -12.0004rv1_A mol:protein length:420 Engineered Protein OR497  ali model follow..  14  46....VEVLVKLLTSTDSEVQKEAARALANIASG--------PDEAIKAIVDAGGVEVLVKLLTSTDSEVQKEAARALANIASGPDEAIKAIVDAGGVEVLVKLLTSTDSEVQKEAARALANIASGPDEAIKAIVDAGGVEVLVKLLT-STDSEVQKEAARALANIASGPTSAIKAIVDAGGVEVLVKLLTSTD--SEVQKEAARALANIASGPDEAIKAIVDAGGVEVLV-----KLLTSTDSEVQKEAARALANIASGPDEAIKAIVDA-GGVEVLVKLLTSTDS. 310
38 -11.9003au3_A mol:protein length:344 Adenomatous polyposis coli protein  ali model follow..  11  152LQQVIASVLRNLSWRADVNSKKTLREVKALMECALEVKKESTLKSVLSALWNLSAHCTENKADICAVDGALAFLVGTLTYRSQ-------------------TNTLAIIESGGGILRNVSSLIATNEDHRQILRENNCLQTLLQHLK-SHSLTIVSNACGTLWNLSARNPKDQEALWDMGAVSMLKNLIHSKH--KMIAMGSAAAL................................................................................. 338
39 -11.9002jdq_A mol:protein length:450 IMPORTIN ALPHA-1 SUBUNIT  ali model follow..  21...ITSDMIEMIFSKSPEQQLSATQKFRKLLS-----KEPNPPIDEVISTPGVVARFVEFLKRKENCTLQFESAWVLTNIASGNSLQTRIVIQAGAVPIFIELLSSEFEDVQEQAVWALGNIAGDSTMCRDYVLDCNILPPLLQLFSKQNRLTMTRNAVWALSNLCRGKSPPPEFAKVSPCLNVLSWLLFVS--DTDVLADACWALSYLSDGPNDKIQAVIDAGVCRRLV-----ELLMHNDYKVVSPALRAVGNIVTGDDIQTQVILNC-SALQSLLHLLSS.... 287
40 -11.9005mfd_A mol:protein length:328 YIIIM``6AII  ali model follow..  14  5...ELPQMVQQLNSPDQQELQSALRKLSQIASG--------GNEQIQAVIDAGALPALVQLLSSPNEQILQEALWTLGNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWTLGNIASGGNEQIQAVIDAGALPALVQLLS-SPNEQILQEALWTLGNIASGGNEQIQAVIDAGALPALVQLLSSPN--EQILQEALWTLGNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWTLGNIASG----GNEQIQAVIDAGA--LPALVQLLSS.... 267
41 -11.8005mfm_C mol:protein length:350 Importin subunit alpha  ali model follow..  14  5...ELPQMVQQLNSPDQQELQSALRKLSQIASG--------GNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLS-SPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPN--EQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASG----GNEQIQAVIDAGA--LPALVQLLSSPNE. 270
42 -11.8003t7u_A mol:protein length:378 Adenomatous polyposis coli protein  ali model follow..  10  72IAELLQVDCEMYGLTNDHYSITLRRYAGMALTNLTFGDVANKATLCSMKGCMRALVAQLKSESEDLQQVIASVLRNL-SWRADVNSKKTLREVGSVKALMECALEVKKESTLKSVLSALWNLSAHCTENKDICAVDGALAFLVGTLTYRSQTESGGGILRNVSSLIATNEDHRQILRENNCLQTLLQHLKSHS--LTIVSNACGTLWNLSARNPKDQEALWDMGAVSMLKNLIHSKHKMIAMGSAAALR-------NLMANRPAKYKDANIMSPGSSLPSLHVRK.. 353
43 -11.8001jpw_A mol:protein length:540 BETA-CATENIN  ali model follow..  12  1...MGSHAVVNLINYQDDAELAAIPELTKLLNDVHQLSKKEASRHAIMRSPQMVSAIVRTMQNTNDVETARCTAGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPV-DSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLN-KTNVKFLAITTDCLQILAYGNQESKLIILASGGPQALVNIMRTYTYEK-VEAGGMQALGLHLTDPSQRLSDAATKQEGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQV-GGIEALVRTVLRAGD. 326
44 -11.8003now_A mol:protein length:810 UNC-45 protein, SD10334p  ali model follow..  496.......ITTALCALAKTESHNSQELIARVLNAVCGLKELRGKVVQEGGVKAL--LRMALEGTEKGKRHATQALARIGITINPEVSFSGQRSLDVIRPLLNLLQQDCTALENFESLMALTNLASMNESVRQRIIKEQGVSKIEYYLM-EDHLYLTRAAAQCLCNLVMSEDVIKMFEGNNDRVKFLALLCEDE--DEETATACAGALAIITSVSVKCCEKILAIASWLDILHTLIAN----PSPAVQHRGIVIILNMINAGEEIAKKLFETMELLSGLGQLPDD.... 764
45 -11.7004uad_A mol:protein length:479 Importin subunit alpha-7  ali model follow..  22.SVITREMVEMLFSDDSDLQLATTQKFRKLLS-----KEPSPPIDEVINTPRVVDRFVEFLKRNENCTLQFEAAWALTNIASGTSQQTKIVIEAGAVPIFIELLNSDFEDVQEQAVWALGNIAGDSSVCRDYVLNCSILNPLLTLLTKSTRLTMTRNAVWALSNLCRGKNPPPEFAKVSPCLPVLSRLLFSS--DSDLLADACWALSYLSDGPNEKIQAVIDSGVCRRLV-----ELLMHNDYKVASPALRAVGNIVTGDDIQTQVILNC-SALPCLLHLLSS.... 290
46 -11.6005ctt_A mol:protein length:447 Importin subunit alpha-1  ali model follow..  11  22...............................................................................................VEDIVKGINSNNLESQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGKTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASPH--AHISEQAVWALGNIAGDGSAFRDLVIKHGAIDPLLALLAVPDLSTLACGYLRNLTWTLSNLCRNKNPAPPLDAVE---LPTLVRLLHHNDP. 209
47 -11.6005mfl_A mol:protein length:350 (KR)5_GS10_YIIIM6AII  ali model follow..  13  25.ASELPQMVQQLNSPDQQELQSALRKLSQIASG--------GNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLS-SPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSP--NEQILQEALWALSNIASGGNEQIQAVIDAGALPALV-----QLLSSPNEQILQEALWALSNIASGGNEQIQAVIDA-GALPALVQLLSS.... 289
48 -11.5004gmo_A mol:protein length:684 Putative uncharacterized protein  ali model follow..  11  33.EDKILPVLKDLKSPDAKSRTTAAGAIANIVQD-----AKCRKLLLREQVVHIVLTETLTDNNIDSRAAGWEILKVL-AQEEEADFCVHLYRLDVLTAIEHAAKAVLETLTTGSLLVLIGLLALARDEIHEAVATKQTILRLLFRLISADIQDIYEEAISCLTTLSEDNLKVGQAITDDQETHVYDVLLKLATGTDPRAVMACGVL................................................................................. 253
49 -11.5005t94_B mol:protein length:542 Importin subunit alpha  ali model follow..  11  86.QQELPQMTQQLNSDDMQEQLSATVKFRQILSR------EHRPPIDVVIQAGVVPRLVEFMRENQPEMLQLEAAWALTNIASGTSAQTKVVVDADAVPLFIQLLYTGSVEVKEQAIWALGNVAGDSTDYRDYVLQCNAMEPILGLFN-SNKPSLIRTATWTLSNLCRGKKPQPDWSVVSQALPTLAKLIYSM--DTETLVDACWAISYLSDGPQEAIQAVIDVRIPKRLV-----ELLSHESTLVQTPALRAVGNIVTGNDLQTQVVINA-GVLPALRLLLSSPKE. 355
50 -11.3004e4v_A mol:protein length:485 Importin subunit alpha-2  ali model follow..  11  29...............................................................................................VDDIVKGINSSNVENQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGRTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASPH--AHISEQAVWALGNIAGDGSVFRDLVIKYGAVDPLLALLAVPDMSSLACGYLRNLTWTLSNLCRNKNPAPPIDAVE-QILPTLVRLLHH.... 213
51 -11.3002yns_A mol:protein length:490 IMPORTIN SUBUNIT ALPHA-1A  ali model follow..  138VREQAVWALGNVAGDSPKCRDLVLANLLPLLAQLNEHTKLSMLRNATWTLSNFCRGKLARLIHSNDEEVLTDACWALSYLSDGTNDKIQAVIEAGVCPRLVELLLHPSPSVLIPALRTVGNIVTGDDAQTQCIIDHQALPCLLSLLTQNLKKSIKKEACWTISNITAGNKDQIQAVINAGIIGPLVNLLQTAE--FDIKKEAAWAISNATSGGSHDQIKYLVSEGCIKPLCDLLICPDIRIVTVCLEGLENILKVGETDKTNVFSQMIDEAEGLEKIENLQSHDNN. 443
52 -11.1003tpo_A mol:protein length:529 Importin subunit alpha-2  ali model follow..  163...AIPAFISLLASPHAHISEQAVWALGNIAGA---GSAFRDLVIKHGAIDPLLALLAVPDLSTLACGYLRNLTWTLSNLCRNKNPAPPLDAVEQILPTLVRLLHHNDPEVLADSCWAISYLTDGPNERIEMVVKKGVVPQLVKLLG-ATELPIVTPALRAIGNIVTGTDEQTQKVIDAGALAVFPSLLTNPK--TNIQKEATWTMSNITAGRQDQIQQVVNHGLVPFLVGVLSKADFKTQKAAAWAITNYTSGGTVEQIVKDTKIIQVILDAISNIFQAAEKLG.. 455
53 -11.1004cb9_A mol:protein length:571 BETA-CATENIN-LIKE PROTEIN 1  ali model follow..  13  145....VQSLLGLLGHDNTDVSIAVVDLLQELTDIDTLHESEEGAEVLIDALVDGQVVALLVQNDESVKEEADGVHNTLAIVENMAEFRPEMCTELLQWLLKRLKAKMPFDANKLYCSEVLAILLQDNDENRELLGELDGIDVLLQQLSTAEEQEMMENLFDSLCSCLML-SSNRERFLKGEGLQLMNLMLREKKISRSSALKVLDHAMIGPEGTDNCHKFVDI-PLFMKSPRKIKKVGTTEKEHEEHVCSILASLLRNLRGQQRTRLLNKFTENVDRLME........ 445
54 -11.1005tbk_A mol:protein length:521 Importin subunit alpha-3  ali model follow..  173VCEQAVWALGNIIGDGPQCRDYVISL--GVVKPLLSFISPSIPITFLRNVTWVMVNLCRHKDPPPPMETIQEILPALCVLIHHTDVNILVDTVWALSYLLVPLLSHQEVKVQTAALRAVGNIVTGTDEQTQVVLNCDALSHFPALLT-HPKEKINKEAVWFLSNITAGNQQQVQAVIDANLVPMIIHLLDKG--DFGTQKEAAWAISNLTISGRKDQVAYLIQQNVIPPFCNLLTVKDAQVVQVVLDGLSNILKMAEDEAETIGNLIEE-LEKIEQLQNHENE.... 471
55 -11.0004wv6_A mol:protein length:471 Importin subunit alpha-1  ali model follow..  120ISEQAVWALGNIAGDGSVFRDLVIKYVDPLLALLAVPDMSSLACGYLRNLTWTLSNLCRNKNPAPPIDAVEQILPTLVRLLHHDDPEVLADTCWAISYLLVKLLGASELPIVTPALRAIGNIVTGTDEQTQVVIDAGALAVFPSLLT-NPKTNIQKEATWTMSNITAGRQDQIQQVVNHGLVPFLVSVLSKAD--FKTQKEAVWAVTNYTSGGTVEQIVYLVHCGIIEPLMNLLTAKDTKIILVILDAISNIFQAAEKLGEEKLSIMIEECGGLDKIEALQNHENE. 424
56 -11.0003oqs_A mol:protein length:510 Importin subunit alpha-2  ali model follow..  1MSSGLVPRGSGMKETAAAKFERQH--MDSPDLGTDDDDKAMADIGSNQGTVNWSVEDIVKGINSNNLESQLQATQAARKLLSREKQPPIDNIIRLIPKFVSFLGKTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLA-SPHAHISEQAVWALGNIAGDGSAFRDLVIKHGAIDPLLALLAVPD--LSTLACGYLRNLTWTLSNLCRNKNPAPPLDAVEQILPTLVRLLHHNDPEVLADSCWAISYLTDGPNERIEMVVKK---VPQLVKLLGATEL. 282
57 -10.9002z6h_A mol:protein length:644 Catenin beta-1  ali model follow..  141.......GLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHL----TDPSQRLVQNCLWTLRNLS---DAATKQEGMEGLLGTLVQLLG-SDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRAGDREDITEPAICAL---LTSRHQEAEMAQNAVRLHYGLPVVVKLLHPPSHWPLIKATVGLIRNLALCPANHAPLREQ--GAIPRLVQLLVR.... 405
58 -10.5002z6g_A mol:protein length:780 B-catenin  ali model follow..  124.......................LAEPSQMLKHAVVNLINYQDDAELATRAIPELTKLLNDEDQVVVNKAAVMVHQLSK--KEASRHAIMRSPQMVSAIVRTMQNTNDVETARCTSGTLHNLS-HHREGLLAIFKSGGIPALVNMLG-SPVDSVLFHAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTN--VKFLAITTDCLQILAYGNQESKLIILASGGPQALVN-----MRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEA--GGMQALGLHLTDPSQ. 374
59 -10.3004u2x_D mol:protein length:175 Importin subunit alpha-6  ali model follow..  2..................................................................................................................................QVILNCSALPCLLHLLS-SPKESIRKEACWTVSNITAGNRAQIQAVIDANIFPVLIEILQKAE--FRTRKEAAWAITNATSGGTPE....................................................................... 84
60 -9.7905xah_A mol:protein length:416 Importin-4  ali model follow..  11  190FAGFLPLLVCKTKQGCTVAEKSFAVGTLAETIQGLGAASAQFVSRLLPV--------LLSTAQEADPEVRSNAIFGMGVLAEHGGHPAQEHFPKLLGLLFPLLARERHDRVRDNICGALARLLMASPTRKPE---PQVLAALLHALPLKEDLEEWVTIGRLFSFLYQSSPDQVIDVAP---LRICSLILADNKIPPDTKAALLLLLTFLA............................................................................. 387
61 -9.6503c2g_A mol:protein length:619 Sys-1 protein  ali model follow..  11  186INPAIFIIFRFIISKDTRLKDYNPHDQPPPPTGLIIKLNAVMIGSYRLIAGQNPETLPQNPELAHLIQVIIRTFDLLGLLLHDSDAIDGFVRSDGVGAITTVVQYPNND-LIRAGCKLLLQVSDAKALAKTPLEN--ILPFLLRLIEIHPDDEVIYSGTGFLSNVVAHKQHVKDIAIRSNAIFLLHTIISKRNRVCEIICNCLRTLNNFLMMWIPTPNGET.................................................................. 420

FFAS is supported by the NIH grant R01-GM087218-01
1 4 7 6 0 7   jobs submitted since Jan 1, 2011
Comments and questions to: webmaster

Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Pio F, Pawlowski K, Godzik A. Saturated BLAST: an automated multiple intermediate sequence search used to detect distant homology. Bioinformatics. 2000 Dec;16(12):1105-10.