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Query: PF09379.10; E41L4_DANRE/15-83; FERM N-terminal domain, from PfamA32U

Results of FFAS03 search in PDB1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .
# Score Template Links and tools%idFirst VLLLDESKLILTTQQQGIKKSTRGSVVLDYVFSHVNLAETEYFGVRYCDRSHQTFWLDPSKTLAEHKDLLast
1 -35.9003qij_A mol:protein length:296 Protein 4.1  ali model follow..  31  16VSLLDDTVYE-----CVVEKHAKGQDLLKRVCEHLNLLEEDYFGLAIWDNATSKTWLDSAKEIKKQVR. 78
2 -35.8002he7_A mol:protein length:283 Band 4.1-like protein 3  ali model follow..  41  7VILLDGSEYT-----CDVEKRSRGQVLFDKVCEHLNLLEKDYFGLTYRDAENQKNWLDPAKEIKKQVR. 69
3 -35.7006d21_A mol:protein length:333 FERM, RhoGEF and pleckstrin domain protein 2  ali model follow..  31  8VQGLDEAQEF-----YELESKADGQLLLSDVFRRINLIESDYFGLEFQNLQMNWVWLDPSKLIVKQVR. 70
4 -35.6006d2q_A mol:protein length:285 FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived)  ali model follow..  30  9VQMLDDTQEV-----FEVSQRAPGKALFDLVCSHLNLVEGDYFGLEFQDQRKMIVWLDLLKPILKQIR. 71
5 -35.4006d2k_A mol:protein length:288 FERM, ARHGEF and pleckstrin domain-containing protein 2  ali model follow..  31  12VKLLDSTVEL-----FDIEPKCDGQVLLTQVWKHLNLIECDYFGLEFKNVQSYWIWLEPMKPIIRQVR. 74
6 -33.9001e5w_A mol:protein length:346 MOESIN  ali model follow..  26  9VTTMDAE------LEFAIQPNTTGKQLFDQVVKTIGLREVWFFGLQYQDTKGFSTWLKLNKKVTAQD.. 69
7 -33.7002ems_A mol:protein length:322 Radixin  ali model follow..  27  11VTTMDAE------LEFAIQPNTTGKQLFDQVVKTVGLREVWFFGLQYVDSKGYSTWLKLNKKVTQQD.. 71
8 -33.0004yl8_A mol:protein length:303 Moesin  ali model follow..  26  15VTTMDAE------LEFAIQPNTTGKQLFDQVVKTIGLREVWFFGLQYQDTKAFSTWLKLNKKVTAQD.. 75
9 -30.1002i1j_A mol:protein length:575 Moesin  ali model follow..  24  9VTTMDAE------LEFAIQQTTTGKQLFDQVVKTIGLREVWFFGLQYTDSKGDLTWIKLYKKVMQQD.. 69
10 -29.9001isn_A mol:protein length:323 merlin  ali model follow..  23  9IVTMDAE------MEFNCEMKWKGKDLFDLVCRTLGLRETWFFGLQYTI-KDTVAWLKMDKKVLDHD.. 68
11 -29.8004rm8_A mol:protein length:587 Ezrin  ali model follow..  27  10VTTMDAE------LEFAIQPNTTGKQLFDQVVKTIGLREVWYFGLHYVDNKGFPTWLKLDKKVSAQE.. 70
12 -29.7006cds_A mol:protein length:339 Merlin  ali model follow..  23  26IVTMDAE------MEFNCEMKWKGKDLFDLVCRTLGLRETWFFGLQYTI-KDTVAWLKMDKKVLDHD.. 85
13 -28.9003wa0_A mol:protein length:301 Merlin  ali model follow..  23  13IVTMDAE------MEFNCEMKWKGKDLFDLVCRTLGLRETWFFGLQYTI-KDTVAWLKMDKKVLDHD.. 72
14 -28.7004zri_A mol:protein length:324 Merlin  ali model follow..  23  30IVTMDAE------MEFNCEMKWKGKDLFDLVCRTLGLRETWFFGLQYTI-KDTVAWLKMDKKVLDHD.. 89
15 -21.0006mfs_A mol:protein length:372 Talin-1 fusion  ali model follow..  15  92IRMLDGTVKTI-----MVDDSKTVTDMLMTICARIGITNHDEYSLVREEKKDELNWLDHGRTLREQ... 155
16 -16.4003zdt_A mol:protein length:377 FOCAL ADHESION KINASE 1  ali model follow..  18SSEPTTW-----ASIIRHGDATDVRGIIQKIVDCHKVKNVACYGLRLSHQSEEVHWLHLDMGVSNVRE. 81
17 -15.5004ny0_D mol:protein length:376 Focal adhesion kinase 1  ali model follow..  12  23...........WASIIRHGDATDVRGIIQKIVDSHKVKHVACYGLRLSHRSEEVHWLHVDMGVSSVRE. 80
18 -12.6002kma_A mol:protein length:178 Talin 1  ali model follow..  15  96IRMLDGTVKTI-----MVDDSKTVTDMLMTICARIGITNHDEYSLVRELMEEKKDWLDHGRTLREQ... 159
19 -12.2004tkn_A mol:protein length:286 Sorting nexin-17  ali model follow..  22  16VLLSNGQKVLV-----NVLTSDQTEDVLEAVAAKLDLPDDGYFSL-FLVREKEDGAFSFVRKLQE.... 76
20 -11.7004eku_A mol:protein length:392 Protein-tyrosine kinase 2-beta  ali model follow..  16  32SFNPGKNFKLV-----KCTVQTEIREIITSILLSGNIRLAECYGLRLKHMKSDEHWLHPQMTVGEVQD. 99
21 -10.8004dxa_B mol:protein length:322 Krev interaction trapped protein 1  ali model follow..  12  10IYRMDGSYRSVEL---KHGNNTTVQQIMEGM--RLSQETQQYFTIWICSENLSRDWPEILAELTNL... 83
22 -10.4005xq1_A mol:protein length:485 Fermitin family homolog 2,Integrin beta-3  ali model follow..  16  166................EALELEPGILAVSQPVTSPEILAKMFKPQALLDKKTNQGWLDSSRSLMEQ... 216

FFAS is supported by the NIH grant R01-GM087218-01
1 3 9 2 2 3   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Slabinski L, Jaroszewski L, Rodrigues AP, Rychlewski L, Wilson IA, Lesley SA, Godzik A. The challenge of protein structure determination--lessons from structuralgenomics. Protein Sci. 2007 Nov;16(11):2472-82.